mRNA_P-littoralis_Contig196.21.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig196.21.1 vs. uniprot
Match: D7FPJ6_ECTSI (DUF667 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ6_ECTSI) HSP 1 Score: 296 bits (759), Expect = 3.650e-98 Identity = 168/288 (58.33%), Postives = 181/288 (62.85%), Query Frame = 1
Query: 70 ELRQVGGRLSPDSWHIDAVLPPDASEMVYEDLQPVAAAMQECEVLQEGNGVSVFDDEELGVQVVELLGRRCCVTLPCSSILRHLCLHMKA----------------------------------------------------------------------------------------------LDKFFSFEVEIVDDTKRYRYIEISNTRSVADIGTDRALLPLRLEEGWQRVNIDLDRTVRLAFGSSYLTTSQVTIRASARVAKVFFQSQEFSDFELPSHLRVVAE 651
+LRQ+G RL+ DSWHIDA+LPP A EMVYEDLQPVAAAMQECEVLQEGN SVFDDEELGVQVVELLGRRC V PCSSILR+LCLH+K LDKFFSFEVEIVDDTKRYRYI+ISNTRSVADIG DRALLPL+LE+GWQRVNIDL+RTVRL FGSSYLTTSQVT+RASARVAK+FFQSQ FSD+ELPSHLRVVAE
Sbjct: 23 QLRQIGDRLAADSWHIDALLPPHAGEMVYEDLQPVAAAMQECEVLQEGNEASVFDDEELGVQVVELLGRRCGVAFPCSSILRYLCLHVKVTQFLRVIHSIVSGKQKDGCCRARETTCATAARVPRFHFFDQHQRISVRFCSELACCNVWLQTLVTTRRRFVPNTSSSTNMRLPKPRLRPDFLQTLDKFFSFEVEIVDDTKRYRYIDISNTRSVADIGDDRALLPLKLEDGWQRVNIDLERTVRLVFGSSYLTTSQVTVRASARVAKLFFQSQPFSDYELPSHLRVVAE 310
BLAST of mRNA_P-littoralis_Contig196.21.1 vs. uniprot
Match: A0A835YVF2_9STRA (DUF667 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF2_9STRA) HSP 1 Score: 160 bits (406), Expect = 3.240e-46 Identity = 85/199 (42.71%), Postives = 124/199 (62.31%), Query Frame = 1
Query: 64 MAELRQVGGRLS----PDSWHIDAVLPPDASEMVYEDLQPVAAAMQECEVLQEGNGVSVFDDEELGVQVVELLGRRCCVTLPCSSILRHLCLHMKALDKFFSFEVEIVDDTKRYRYIEISNTRSVADIGTDRALLPLRLEEGWQRVNIDLDRTVRLAFGSSYLTTSQVTIRASARVAKVFFQSQEFSDFELPSHLRVVA 648
M E GG L+ D+ +D VLP + Y DLQ V+AAM+ECE+L N +S +DDEELGVQ++E+LG V PC + LC H+K +D+F S +V+++DDT ++R + +SN RSVA I A LP++L GW + IDL+ R AFG+ T QV + S RVAK+FF+ + ++D +LP HL+ ++
Sbjct: 1 MFEADDNGGNLANGDITDNTLVDLVLPAQSIGGEYADLQAVSAAMRECELLGGDNEISAYDDEELGVQMLEILGESARVAFPCYCVRPILCAHLKMIDRFCSIDVDLLDDTGQHRSMNLSNHRSVATIDGAYADLPMQLTSGWNHLAIDLNLVTRTAFGTGLSATCQVAVNGSCRVAKLFFEQEAYADAQLPGHLQALS 199
BLAST of mRNA_P-littoralis_Contig196.21.1 vs. uniprot
Match: A0A7S1TVV2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVV2_9STRA) HSP 1 Score: 154 bits (390), Expect = 5.850e-44 Identity = 82/179 (45.81%), Postives = 113/179 (63.13%), Query Frame = 1
Query: 109 WHIDAVLPPDASEMVYEDLQPVAAAMQECEVLQEGNGVSVFDDEELGVQVVELLGRRCCVTLPCSSILRHLCLHMKALDKFFSFEVEIVDDTKRYRYIEISNTRSVADIGTDRALLPLRLEEGWQRVNIDLDRTVRLAFGSSYLTTSQVTIRASARVAKVFFQSQEFSDFELPSHLRVV 645
+ ID VLPP+ + E+L V+AA C+ L N V +DEELG +V+EL+G + LP SSIL L LH+K+ FF ++ VD+TK+YR ISN +S+ + A LPL ++EGWQR+ +++ AFGS YLTT QV +R S V+K FFQ ++SD ELPSHLRV+
Sbjct: 9 YSIDCVLPPNEEDTDLENLHCVSAARAACKELPGDNEAEVVEDEELGKEVIELMGLEAELVLPTSSILPMLVLHVKSTSHFFWICIDFVDNTKKYRTFTISNKQSIVSVDETEAKLPLIIDEGWQRLCFNVEELTAKAFGSKYLTTYQVRVRGSVCVSKAFFQGHDYSDAELPSHLRVL 187
BLAST of mRNA_P-littoralis_Contig196.21.1 vs. uniprot
Match: K3W6T8_GLOUD (DUF667 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6T8_GLOUD) HSP 1 Score: 122 bits (307), Expect = 1.120e-30 Identity = 63/163 (38.65%), Postives = 102/163 (62.58%), Query Frame = 1
Query: 154 YEDLQPVAAAMQECEVLQEGNGVSVFDDEELGVQVVELLGRRCCVTLPCSSILRHLCLHMKALDKFFSFEVEIVDDTKRYRYIEISNTRSVADIGTDRALLPLRL--EEGWQRVNIDLDRTVRLAFGSSYLTTSQVTIRASARVAKVFFQSQEFSDFELPSHL 636
+ D + A EC L GN VS+ +DE++ ++VE+LG + +I R+L L +K L ++F F+VE+VDD ++YRY++ +N RS+A + A LPL ++GW+ + +DL AFG+ ++TT+QV I + R+ +VFFQ + +SD ELP+HL
Sbjct: 95 FADHPVIQQAQDECRNLLNGNIVSILEDEDVKEEIVEVLGPESELVFSTRNIFRYLVLFVKNLGQYFEFQVEVVDDKQKYRYLKATNARSLARVDNSVAQLPLAFGQQQGWRYLCMDLQELTMQAFGTKHVTTTQVRIGGNCRLLRVFFQDELYSDAELPTHL 257
BLAST of mRNA_P-littoralis_Contig196.21.1 vs. uniprot
Match: W4G477_9STRA (DUF667 domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G477_9STRA) HSP 1 Score: 112 bits (279), Expect = 3.320e-27 Identity = 63/175 (36.00%), Postives = 103/175 (58.86%), Query Frame = 1
Query: 130 PPDASEMVYEDLQP-VAAAMQECEVLQEGNGVSVFDDEELGVQVVELLGRRCCVTLPCSSILRHLCLHMKALDKFFSFEVEIVDDTKRYRYIEISNTRSVADIGTDRALLPLRLEEG--WQRVNIDLDRTVRLAFGSSYLTTSQVTIRASARVAKVFFQSQEFSDFELPSHLRVV 645
P D +++ +L P V A EC+ + N V V +D ++ VVE+ G V C ++++ L L +K LD +F+ ++E+VDDTK YR I+N+RS+A + +PL +G W+ V +D+ R AFG+ ++ T QVT+ A+ R+ +VFFQ ++SD ELP L ++
Sbjct: 22 PSDTGDLIPLELHPAVLLADDECQQVGGDNIVQVVEDADVHQPVVEIRGSDARVVFNCHNVMQFLVLFVKNLDAYFALDIEVVDDTKTYRTFHITNSRSLARVQASACQMPLVFGKGGTWRHVCLDVHRMCLDAFGTHHVATVQVTVHATCRLLRVFFQDVDYSDAELPPMLALL 196
BLAST of mRNA_P-littoralis_Contig196.21.1 vs. uniprot
Match: F0W4I9_9STRA (Uncharacterized protein AlNc14C17G1810 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4I9_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.980e-21 Identity = 51/154 (33.12%), Postives = 94/154 (61.04%), Query Frame = 1
Query: 196 EVLQEGNGVSVFDDEELGVQVVELLGRRCCVTLPCSSILRHLCLHMKALDKFFSFEVEIVDDTKRYRYIEISNTRSVADIGTDRALLPLRL----EEGWQRVNIDLDRTVRLAFGSSYLTTSQVTIRASARVAKVFFQSQEFSDFELPSHLRVV 645
E+L+ N VS+F DE++ QVV++ G+R + +S+LR+L L +K L +F +V I+ + Y+ ++++N RS+A + DR + L E GW+ + +DL AFG+ ++ T+++ IR R+ +V+FQ +E+ D +LP +L ++
Sbjct: 78 ELLRNNNQVSIFKDEDVNGQVVQIQGQREGLVFSVTSVLRYLVLFIKNLKQFVEIDVTILVSGREYKVMKVTNARSLAKVDADRCKCQIPLLFGAETGWRYLCMDLKDLSIQAFGTEHIATTRIRIRGFCRLLRVYFQEEEYHDHQLPPYLSLL 231
BLAST of mRNA_P-littoralis_Contig196.21.1 vs. uniprot
Match: A0A6G1S9M0_9ACAR (UPF0468 protein C16orf80 n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1S9M0_9ACAR) HSP 1 Score: 95.5 bits (236), Expect = 7.520e-21 Identity = 48/144 (33.33%), Postives = 86/144 (59.72%), Query Frame = 1
Query: 235 DEELGVQVVELLGRRCCVT-LPCSSI-------LRHLCLHMKALDKFFSFEVEIVDDTKRYRYIEISNTRSVADIGTDRALLPLRLEEGWQRVNIDLDRTVRLAFGSSYLTTSQVTIRASARVAKVFFQSQEFSDFELPSHLRV 642
DE++ V+E+ T + C I L H+ L +K LD+FF+FE+EI+DDTK R SN ++ + +PL+LE GW +N++L R A+G++Y+ TS++T+ A+ R+ +++F ++++D ELP+ ++
Sbjct: 39 DEDIKSLVLEITSSNVSTTYITCPKISKSLGITLSHIVLIVKNLDRFFTFEIEIIDDTKAKRRFRASNYQTRTRVKDFICTMPLKLESGWNHINLNLADFTRRAYGTNYVETSRITVNANCRLRRIYFADRQYTDEELPAEFKL 182
BLAST of mRNA_P-littoralis_Contig196.21.1 vs. uniprot
Match: A0A024GDR5_9STRA (DUF667 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GDR5_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 5.690e-20 Identity = 45/155 (29.03%), Postives = 95/155 (61.29%), Query Frame = 1
Query: 196 EVLQEGNGVSVFDDEELGVQVVELLGRRCCVTLPCSSILRHLCLHMKALDKFFSFEVEIVDDTKRYRYIEISNTRSVADIGTDRALLPLRL----EEGWQRVNIDLDRTVRLAFGSSYLTTSQVTIRASARVAKVFFQSQEFSDFELPSHLRVVA 648
E+L+ N +S+ +DE++ VQVV++ G + + +S+LR+L L +K L ++ +V I+ + Y+ + ++N RS+A + D++ + + GW+ + +DL AFG+ ++ T+ + +R R+ +V+FQ ++++D +LPS+L ++A
Sbjct: 78 ELLRNENQISILEDEDVNVQVVQIQGHKEGLVFSVNSVLRYLVLFIKNLKQYVEIDVTILVSGREYKVMNVTNARSLAKVDADQSKCQIPFLFGFKTGWRYLCMDLKELSMQAFGTEHIATTHIRVRGFCRLLRVYFQEEQYNDNQLPSYLSLLA 232
BLAST of mRNA_P-littoralis_Contig196.21.1 vs. uniprot
Match: A0A6B2LJY4_9EUKA (DUF667 domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LJY4_9EUKA) HSP 1 Score: 91.3 bits (225), Expect = 2.530e-19 Identity = 51/150 (34.00%), Postives = 85/150 (56.67%), Query Frame = 1
Query: 220 VSVFDDEELGVQVVELLGRRC------CVTLPCSSI---LRHLCLHMKALDKFFSFEVEIVDDTKRYRYIEISNTRSVADIGTDRALLPLRLEEGWQRVNIDLDRTVRLAFGSSYLTTSQVTIRASARVAKVFFQSQEFSDFELPSHLRV 642
+ DDE + +V+E+ G C P ++ L ++ L +K +DKFFSFE++I+DD R SN +SV + LPL+L++GW ++ IDL + A+G++YL T QV I A+ R+ +++F + +D ELPS ++
Sbjct: 34 IEFVDDEHIKSKVLEITGDNVAHHSIICPKDPKKTLGITLPYIILLVKNVDKFFSFEIQILDDKSVRRRFRASNFQSVTRVRPSICTLPLQLDDGWNQIQIDLAHYTKRAYGTNYLQTLQVQIHANCRIRRIYFAEKIMTDEELPSAFKL 183
BLAST of mRNA_P-littoralis_Contig196.21.1 vs. uniprot
Match: A0A834REJ3_SARSC (Cilia- and flagella-associated protein 20 n=2 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A834REJ3_SARSC) HSP 1 Score: 89.0 bits (219), Expect = 2.930e-18 Identity = 51/145 (35.17%), Postives = 83/145 (57.24%), Query Frame = 1
Query: 235 DEELGVQVVELLGRRCCVT-LPCSSILRH--------LCLHMKALDKFFSFEVEIVDDTKRYRYIEISNTRSVADIGTDRALLPLRLEEGWQRVNIDLDRTVRLAFGSSYLTTSQVTIRASARVAKVFFQSQEFSDFELPSHLRV 642
D E+ V+E+ G T + C SI R L L +K L +FFSFEVEI+DD R SN +S+ + +PLRL+EGW ++ +L+ + A+GS+Y+ T +VTI A+ R+ +++F + +S+ ELP+ ++
Sbjct: 39 DNEIQSLVIEITGSNVATTYITCPSIPRSGLGIKLPFLILIVKNLQRFFSFEVEILDDKNVRRRFRASNFQSITRVKHFMCSMPLRLDEGWNQIAFNLNDFCKRAYGSTYVETIRVTINANCRLRRIYFADRMYSEDELPAEFKL 183 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig196.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig196.21.1 >prot_P-littoralis_Contig196.21.1 ID=prot_P-littoralis_Contig196.21.1|Name=mRNA_P-littoralis_Contig196.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=219bp MTVIGTSASFGSDESKVDLDGMAELRQVGGRLSPDSWHIDAVLPPDASEMback to top mRNA from alignment at P-littoralis_Contig196:94528..97291- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig196.21.1 ID=mRNA_P-littoralis_Contig196.21.1|Name=mRNA_P-littoralis_Contig196.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2764bp|location=Sequence derived from alignment at P-littoralis_Contig196:94528..97291- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig196:94528..97291- >mRNA_P-littoralis_Contig196.21.1 ID=mRNA_P-littoralis_Contig196.21.1|Name=mRNA_P-littoralis_Contig196.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=657bp|location=Sequence derived from alignment at P-littoralis_Contig196:94528..97291- (Pylaiella littoralis U1_48)back to top |