mRNA_P-littoralis_Contig192.28.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig192.28.2 vs. uniprot
Match: D7FML3_ECTSI (Putative Leucine Rich Repeat Receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML3_ECTSI) HSP 1 Score: 468 bits (1204), Expect = 9.400e-150 Identity = 514/776 (66.24%), Postives = 555/776 (71.52%), Query Frame = 1
Query: 184 VHLEIDYHSLKKQSIRAEVADVAHIEEELSNVAAKMEKLERSVTTISEESKKQHDNIMATLKNVRIYRQTLGQDQLSTVLATARNEESLERDTTTSVASDSSSPLGGIDAEGFPIRFSRGGGKETGTDRDKLEPQDESATLVPEARLAPGRPPKPNSNLKAVHVVAKKA-----LGPSLHLKPYSQSYGVGLAEGVMAGGWLGDAGSSLEADFGEGGAKRGEYEVSFGEGQMGMSLKNVEARAEVSKVEIGGAAHAAGVRPGDNVSGINGRIPLGYTQVMGSLPLVPRPVRVCFIRGQGVTVSPGTDVKKSHASTWASNAVTAGVNHPAGDKGVLLEMYAKASFSQNPWVRSLGWDALPLPSAARDLQDGGTSRVETSCGADDELSKWSGVRVGRRGKVVELRLPGNNMNGVLPPSMGSLDELRIIELREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDARWINGMSHILLNNNKLSGHIPSTLGRLTHLTELDLNFNGXXXXXXXXLSTARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVGAYLTNLTXXXXXXXXXXXXXXXXXGGACKLKKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPLVHIQWGNLCNXXXXXXXXXXXXXXXPDSFGSXXXXXXXXXXXXXXXXXXXXQLHXXXXXXXXXXXXXKIATGLLPRTSFFSEKRTLKKKLSECDVRF 2496
+HLEIDYHSLKKQS +AE+ DVAH+E++L++VAA ME L +R+ +T+ AT + L T + P G +D K +D + + P+ARL PGRPPKP N AV VA KA LGPSLH+KPYSQSYGVGLA GVMAGGWL DAG + A G+GGAKRGEYEVSFGEG MGMSLKNV+ARAEVSK E GGAA AAGVRPGDNVSGINGRIPLGYTQVMG+LP PRPVR+CF RGQG T+SPG KKSHASTWASNAVTAGV+HPAGDKGVLLE+YA+AS S WVRS GWD LP P Q GT++ E G+D L +WSGVR+GR+ KVVE+RLPGN M GVLP S GSLDELRI+ELRE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDARWI MS +L DL+F XXXXXXX LS AR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVGA TN XXXXXXXXXXXXXXXXX GACKLKKL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GPLVHI W NL N P SFGS XXX X XXXXX X + HXXXXXXXXXXXXX A GLL R S F +KRTLKKKLSECDVRF
Sbjct: 68 LHLEIDYHSLKKQSAQAEMRDVAHVEDQLASVAANME----------------------VLVFLRMPEKTISWK------ATVKLPRGLGHPPHTRMV-----PKGSMDK--------------------KRRTKDATGAIHPQARLTPGRPPKPGVNATAVQSVASKAVNGRALGPSLHIKPYSQSYGVGLAAGVMAGGWLADAGLASGASAGDGGAKRGEYEVSFGEGPMGMSLKNVDARAEVSKTEQGGAAAAAGVRPGDNVSGINGRIPLGYTQVMGTLPTTPRPVRICFTRGQGSTISPGGPGKKSHASTWASNAVTAGVHHPAGDKGVLLEIYAQASLSSTTWVRSQGWDELPPPETEDCAQAEGTTK-ENRSGSDIGLERWSGVRIGRKNKVVEIRLPGNGMVGVLPASTGSLDELRILELRENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDARWIGSMSVLLXXXXXXXXXXXXXXXXXXXXXXXDLSFXQXXXXXXXELSNARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVGACSTNXXXXXXXXXXXXXXXXXXXXGACKLKKLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGPLVHIPWANLENLEHLLLGNNKLEGTLPASFGSLXXXVSXDCXXXXXAXNIPREYHXXXXXXXXXXXXXXXAAGLLQRGSSFRDKRTLKKKLSECDVRF 789 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.28.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig192.28.2 >prot_P-littoralis_Contig192.28.2 ID=prot_P-littoralis_Contig192.28.2|Name=mRNA_P-littoralis_Contig192.28.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=833bp MVDAVTSIVKLAVALSKVPETVKINRGQCQLLVDRITSLSGHLERMQGEGback to top mRNA from alignment at P-littoralis_Contig192:133448..143472+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig192.28.2 ID=mRNA_P-littoralis_Contig192.28.2|Name=mRNA_P-littoralis_Contig192.28.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10025bp|location=Sequence derived from alignment at P-littoralis_Contig192:133448..143472+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig192:133448..143472+ >mRNA_P-littoralis_Contig192.28.2 ID=mRNA_P-littoralis_Contig192.28.2|Name=mRNA_P-littoralis_Contig192.28.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2499bp|location=Sequence derived from alignment at P-littoralis_Contig192:133448..143472+ (Pylaiella littoralis U1_48)back to top |