prot_P-littoralis_Contig192.28.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig192.28.2
Unique Nameprot_P-littoralis_Contig192.28.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length833
Homology
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BLAST of mRNA_P-littoralis_Contig192.28.2 vs. uniprot
Match: D7FML3_ECTSI (Putative Leucine Rich Repeat Receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML3_ECTSI)

HSP 1 Score: 468 bits (1204), Expect = 9.400e-150
Identity = 514/776 (66.24%), Postives = 555/776 (71.52%), Query Frame = 0 
Query:   62 VHLEIDYHSLKKQSIRAEVADVAHIEEELSNVAAKMEKLERSVTTISEESKKQHDNIMATLKNVRIYRQTLGQDQLSTVLATARNEESLERDTTTSVASDSSSPLGGIDAEGFPIRFSRGGGKETGTDRDKLEPQDESATLVPEARLAPGRPPKPNSNLKAVHVVAKKA-----LGPSLHLKPYSQSYGVGLAEGVMAGGWLGDAGSSLEADFGEGGAKRGEYEVSFGEGQMGMSLKNVEARAEVSKVEIGGAAHAAGVRPGDNVSGINGRIPLGYTQVMGSLPLVPRPVRVCFIRGQGVTVSPGTDVKKSHASTWASNAVTAGVNHPAGDKGVLLEMYAKASFSQNPWVRSLGWDALPLPSAARDLQDGGTSRVETSCGADDELSKWSGVRVGRRGKVVELRLPGNNMNGVLPPSMGSLDELRIIELREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDARWINGMSHILLNNNKLSGHIPSTLGRLTHLTELDLNFNGXXXXXXXXLSTARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVGAYLTNLTXXXXXXXXXXXXXXXXXGGACKLKKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPLVHIQWGNLCNXXXXXXXXXXXXXXXPDSFGSXXXXXXXXXXXXXXXXXXXXQLHXXXXXXXXXXXXXKIATGLLPRTSFFSEKRTLKKKLSECDVRF 832
            +HLEIDYHSLKKQS +AE+ DVAH+E++L++VAA ME                       L  +R+  +T+         AT +    L     T +      P G +D                     K   +D +  + P+ARL PGRPPKP  N  AV  VA KA     LGPSLH+KPYSQSYGVGLA GVMAGGWL DAG +  A  G+GGAKRGEYEVSFGEG MGMSLKNV+ARAEVSK E GGAA AAGVRPGDNVSGINGRIPLGYTQVMG+LP  PRPVR+CF RGQG T+SPG   KKSHASTWASNAVTAGV+HPAGDKGVLLE+YA+AS S   WVRS GWD LP P      Q  GT++ E   G+D  L +WSGVR+GR+ KVVE+RLPGN M GVLP S GSLDELRI+ELRE  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDARWI  MS +L                       DL+F  XXXXXXX LS AR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVGA  TN  XXXXXXXXXXXXXXXXX GACKLKKL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GPLVHI W NL N               P SFGS XXX  X  XXXXX X    + HXXXXXXXXXXXXX  A GLL R S F +KRTLKKKLSECDVRF
Sbjct:   68 LHLEIDYHSLKKQSAQAEMRDVAHVEDQLASVAANME----------------------VLVFLRMPEKTISWK------ATVKLPRGLGHPPHTRMV-----PKGSMDK--------------------KRRTKDATGAIHPQARLTPGRPPKPGVNATAVQSVASKAVNGRALGPSLHIKPYSQSYGVGLAAGVMAGGWLADAGLASGASAGDGGAKRGEYEVSFGEGPMGMSLKNVDARAEVSKTEQGGAAAAAGVRPGDNVSGINGRIPLGYTQVMGTLPTTPRPVRICFTRGQGSTISPGGPGKKSHASTWASNAVTAGVHHPAGDKGVLLEIYAQASLSSTTWVRSQGWDELPPPETEDCAQAEGTTK-ENRSGSDIGLERWSGVRIGRKNKVVEIRLPGNGMVGVLPASTGSLDELRILELRENRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDARWIGSMSVLLXXXXXXXXXXXXXXXXXXXXXXXDLSFXQXXXXXXXELSNARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSVGACSTNXXXXXXXXXXXXXXXXXXXXGACKLKKLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGPLVHIPWANLENLEHLLLGNNKLEGTLPASFGSLXXXVSXDCXXXXXAXNIPREYHXXXXXXXXXXXXXXXAAGLLQRGSSFRDKRTLKKKLSECDVRF 789
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.28.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FML3_ECTSI9.400e-15066.24Putative Leucine Rich Repeat Receptor n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..110
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 476..502
e-value: 180.0
score: 5.3
coord: 549..572
e-value: 14.0
score: 14.4
coord: 791..830
e-value: 170.0
score: 5.6
coord: 670..693
e-value: 66.0
score: 8.9
coord: 597..623
e-value: 220.0
score: 4.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..198
NoneNo IPR availablePANTHERPTHR48060:SF7DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100coord: 456..664
coord: 540..735
NoneNo IPR availablePANTHERPTHR48060:SF7DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100coord: 647..811
NoneNo IPR availablePANTHERPTHR48060DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100coord: 540..735
NoneNo IPR availablePANTHERPTHR48060DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100coord: 456..664
coord: 647..811
NoneNo IPR availableCDDcd00136PDZcoord: 288..327
e-value: 5.57989E-4
score: 37.2849
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 529..807
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 448..568
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 791..816
e-value: 20.0
score: 10.9
coord: 767..790
e-value: 330.0
score: 0.9
coord: 597..620
e-value: 210.0
score: 2.5
coord: 549..573
e-value: 8.9
score: 13.7
coord: 743..766
e-value: 5.9
score: 15.1
coord: 500..523
e-value: 350.0
score: 0.6
coord: 670..694
e-value: 14.0
score: 12.0
coord: 621..645
e-value: 3.4
score: 16.6
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 286..354
e-value: 0.0024
score: 27.1
IPR001478PDZ domainPROSITEPS50106PDZcoord: 285..354
score: 9.2499
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 418..522
e-value: 7.8E-20
score: 73.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 523..644
e-value: 7.0E-35
score: 122.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 645..831
e-value: 1.3E-44
score: 154.4
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 745..804
e-value: 9.2E-11
score: 41.3
coord: 575..634
e-value: 8.1E-10
score: 38.3
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 550..564
e-value: 0.18
score: 12.0
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 285..354

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig192contigP-littoralis_Contig192:133448..143472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig192.28.2mRNA_P-littoralis_Contig192.28.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig192 133448..143472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig192.28.2 ID=prot_P-littoralis_Contig192.28.2|Name=mRNA_P-littoralis_Contig192.28.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=833bp
MVDAVTSIVKLAVALSKVPETVKINRGQCQLLVDRITSLSGHLERMQGEG
MQEKLEKSHEIVHLEIDYHSLKKQSIRAEVADVAHIEEELSNVAAKMEKL
ERSVTTISEESKKQHDNIMATLKNVRIYRQTLGQDQLSTVLATARNEESL
ERDTTTSVASDSSSPLGGIDAEGFPIRFSRGGGKETGTDRDKLEPQDESA
TLVPEARLAPGRPPKPNSNLKAVHVVAKKALGPSLHLKPYSQSYGVGLAE
GVMAGGWLGDAGSSLEADFGEGGAKRGEYEVSFGEGQMGMSLKNVEARAE
VSKVEIGGAAHAAGVRPGDNVSGINGRIPLGYTQVMGSLPLVPRPVRVCF
IRGQGVTVSPGTDVKKSHASTWASNAVTAGVNHPAGDKGVLLEMYAKASF
SQNPWVRSLGWDALPLPSAARDLQDGGTSRVETSCGADDELSKWSGVRVG
RRGKVVELRLPGNNMNGVLPPSMGSLDELRIIELRENRLEGNIPESLRYL
QKLTKVDLAHNLLEGSVPGGDARWINGMSHILLNNNKLSGHIPSTLGRLT
HLTELDLNFNGLSGTIPSELSTARALEVLCLAHNGLTGPVPQSFGSLTKL
KVLNISNNKVTGPLPQGIESLTSLEVLLLAHNSLSGSIPEGALSSASLVL
VDMSFNELEGKIPNSVGAYLTNLTVLDISKNSLSGELPSNIGGACKLKKL
NLQKNSIEGALPTALAECKALEDLNFSSNLLTGPLVHIQWGNLCNLEHLV
LANNKLQGALPDSFGSLASLVSLDISKNQLAGNIPRQLHDLTGLKLLDLS
GNKIATGLLPRTSFFSEKRTLKKKLSECDVRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001478PDZ
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt
IPR036034PDZ_sf