mRNA_P-littoralis_Contig192.20.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: D7FMK9_ECTSI (UV excision repair protein RAD23B homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK9_ECTSI) HSP 1 Score: 500 bits (1287), Expect = 8.570e-167 Identity = 351/483 (72.67%), Postives = 366/483 (75.78%), Query Frame = 1
Query: 1 MVKLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPAAXPVAAAAP-------NADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAARGAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGGGLSAFQAPAPTPAAAPAAPATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSADGNNPSGGGDEDEDMYG 1428
MVKLTVKTIKGKKFQIEVEQT VREVKGVIE+QNAEFPAAQLKLIHSGQILKD+ TL EY+IKE+EFLVCMVTKP XXXXXXXXXXXXXXXXXX T AA P AA A NADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIP+NI + AAPAQA A GAMETL+DFRGHPQFN+LKRLVQRDPTQLS +LQMIG+QSP LLARIHENQGDFIALMNEP++ESAPPAAAA XXXXX LQGM+P QRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGM VIRLSEEEGAAVARLTELGF+RTDAAQAYLACDKNEALAANFLLNDMG G AFQAPAP PA P TA XXXXXXXX +PSA GNNP GGGDEDEDMYG
Sbjct: 1 MVKLTVKTIKGKKFQIEVEQTQTVREVKGVIEEQNAEFPAAQLKLIHSGQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXX-----------TAAAAPAAAPAXXXXXXXXNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPDNIQAAAAPAQAAAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPINESAPPAAAAGNAXXXXXFGPMMGSGGQANNPAQVAQLLQGMSPAQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGIPPGAGGAGGN-VIRLSEEEGAAVARLTELGFERTDAAQAYLACDKNEALAANFLLNDMGAGMPPAFQAPAPVPA-----PPTAATPATXXXXXXXXSDSTAPSATENPADPSPATGESSPTNPSAGGNNPQGGGDEDEDMYG 466
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: B7FSN5_PHATC (RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSN5_PHATC) HSP 1 Score: 238 bits (607), Expect = 8.200e-67 Identity = 187/433 (43.19%), Postives = 234/433 (54.04%), Query Frame = 1
Query: 7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPAAXP---VAAAAP---------------------NADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAA---------PAQAPGAARGAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAA------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGGG 1188
KL VKT+KG+KF+I E++ V +VKG+IE +E A LKLIHSG++LKD+ ++ IKE++FLV MVTK K PAA P VAAAA +A+ V LT MGFPE +V LRAA GNPD+AVEFL GIPE + AA P+ + ++ G+ + L R HPQFNDL+RLVQ +P L +VL IGQQ P LL I+ NQ F+ +MNEPV+ SA +AA + +QGM+P++ QMAA MXXXXXXXXXXXXXXXXX EQ Q M GG M V+RL+EEE AAV RL E+GFDR++AAQA+LACDKNEALAAN L++ MG GG
Sbjct: 2 KLLVKTLKGEKFEIHAEESQTVADVKGIIEATKSELSAGTLKLIHSGKVLKDEDSIASAGIKENDFLVVMVTKAKKPVAAKPAATPTP----------------VPAATPGPPVAAAASIEXXXXXXXXXXXXPTRADDVSAEAVANLTSMGFPEAEVKHCLRAAHGNPDIAVEFLTNGIPEGVAEAAAAMNTSAVTSPSASSESSSGSGQPLQALRNHPQFNDLRRLVQSNPQMLQQVLTQIGQQQPQLLQEINANQALFLQIMNEPVESSASVSAAPAVSGSSDAPSLGGLDSGAAAMMEGMGNPAQMAQMIQGMSPEELNQMAAMMXXXXXXXXXXXXXXXXXPPEQLSQFMMQAMGGGEGPESMGGSQ----------VLRLTEEEMAAVDRLAEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDGG 408
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A8J2SQ80_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQ80_9STRA) HSP 1 Score: 230 bits (586), Expect = 5.150e-64 Identity = 189/396 (47.73%), Postives = 236/396 (59.60%), Query Frame = 1
Query: 16 VKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPA-AXPVAAAAPNADHVRQLTEMGFP-EDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAARGAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGGGLSA 1197
VKT++G+ F++E ++ VK +IE E AA +KLIHSG++LKDD TL + + E FLVCMVTKPK XXXXXXXXXXXXXXXXXXXXXXXXX A P + + + QL MGF E+Q AALRAAMGN D+AVEFLM GIPE PS+ AA L R HPQF++L+R +Q +P L +VLQ +G++ P LL I +NQ +F+A+MNEPV E+ PA A +Q ++PQQRAQ+AA + EQ +QL+G++ GGMP XXXXXXXX V+RL+ EE AV RL ELGF R DAAQAYLACDKNE+LAAN L + GGGG +A
Sbjct: 5 VKTLEGRLFKVEAAPEASIKAVKDIIETSQPELKAAMMKLIHSGKVLKDDETLADKGVTEQSFLVCMVTKPKRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPQNDEFVSPEALAQLNAMGFGHEEQSRAALRAAMGNVDMAVEFLMNGIPEEQPSQNVEMTEAQAA----SPLAVLRSHPQFDELRRTIQANPASLQQVLQGLGREDPQLLQTIKDNQAEFLAMMNEPVQEA--PAMGAGGDDLDAAQFARA---------------MQSISPQQRAQLAATIGLTPEQFEQFSQQMQNMPREQLRQLLGALGGGGMP---RGAXXXXXXXXPPQNVVRLTREEAEAVGRLCELGFSREDAAQAYLACDKNESLAANLLFDGFGGGGPTA 376
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A6G0WDE9_9STRA (UV excision repair protein RAD23 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDE9_9STRA) HSP 1 Score: 229 bits (585), Expect = 5.600e-64 Identity = 189/414 (45.65%), Postives = 227/414 (54.83%), Query Frame = 1
Query: 7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------TTPAAXPVAAAAPNA--DHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAARGAM---ETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 1182
KLTVKT++G IE E V VK +E N Q KLIH+G++LKD+S L EY IKE++FLV MVTKPK XXXXXXXXXXXX TPAA A D +RQL +MGFPE+QV AL+AA NPD AVE+LM GIPE A PA AP AA G + +L+ R HPQF+ L+RL+Q +P L VLQ IG QSP LL IH NQ +F+ ++NEP+ ESA PAA A + ++PQQ+A MAA M XXXXXXXXXXX Q+M +M AGG GA I L+EEE AAV RL ++GFDR + QAYLACDKNEALAANFL++ M G
Sbjct: 2 KLTVKTLQGVAHAIEAELEDTVLSVKHKVEAVNGAAVENQ-KLIHAGKVLKDESKLAEYNIKENDFLVVMVTKPKVVRKPPTEPTPAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAAGAEGLVVGEALNDTIRQLCDMGFPEEQVRVALQAAFNNPDRAVEYLMNGIPEQ--PAAPPASAPAAASGGLGAPNSLEALRSHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHANQEEFVRMLNEPIAESAAPAAGASPFGDADAGGMPSPQQLQQL--------MASLSPQQQAAMAAQMGMTPDQLQXXXXXXXXXXXXXXAQMMQNMQAGGGVGAPTR--------------IHLTEEEAAAVGRLCDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 390
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A6T7K158_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7K158_9STRA) HSP 1 Score: 230 bits (586), Expect = 6.900e-64 Identity = 191/401 (47.63%), Postives = 235/401 (58.60%), Query Frame = 1
Query: 10 LTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPAAXPVAAAAPNADH-----VRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAARGAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEP--VDESAPPAAA---AXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXG----VIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLN 1170
LTVKT+KG KF ++ + V +VKG+IE +E PAA +KLIHSG++LKD ++E IK +FLV M+TK K XXXXXXXXXXXXXXXXXXXXXXXXX A A AAP AD + LT MGFPE + A LRAA GNPD+AVEFLM GIP + ++ A A ++ G E L R HPQF+ L+RLVQ +P L VL IGQQ P LL I+ NQ F+ +MNEP VD +A P+ A + LQ M+P + +MA+ M EQFQ+ M M A G GM XXXXXX G ++RL+E+E AAV RLTE+GFDR DAAQA+LACDKNEALAAN L++
Sbjct: 3 LTVKTLKGGKFTVDAAPSSTVADVKGLIEAAKSELPAATMKLIHSGKVLKDADSIESCNIKPTDFLVVMITKAKKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEPAVAAPPADDFPAEVINNLTGMGFPEAEARACLRAASGNPDIAVEFLMNGIPPAVQAQQAAATTGSSSSG--EPLAALRSHPQFDALRRLVQSNPQTLQAVLTQIGQQQPELLREINANQAQFLEMMNEPIAVDPAAAPSVAPTVSSPAAPTGTGGMPAGLMEGMGNPAQMAQMLQSMSPNELNEMASMMNLSPEQLTATAQMISQMPPEQFQEYM--MQAMQQGGGGMGMPGMMXXXXXXGGSQPQMLRLTEDEMAAVDRLTEMGFDRADAAQAFLACDKNEALAANLLMD 399
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A024TCU4_9STRA (UV excision repair protein RAD23 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCU4_9STRA) HSP 1 Score: 227 bits (578), Expect = 5.970e-63 Identity = 177/413 (42.86%), Postives = 221/413 (53.51%), Query Frame = 1
Query: 7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------TTPAAXPVAAAAPNA--DHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAAR-GAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 1182
KLTVKT++G + IE E V VKG +E N Q KLIH+G++LKDDS L EY +KE++FLV MVTKPK XXXXXXXXXXXXXX +TPAA A + VRQL +MGFPEDQV AAL+AA NP+ AVE+LM GIPE + A AP + GA +L+ R HPQF+ L+R++Q +P+ L VLQ IG Q+P LL IH+NQ F+A++NEP+ E+A P+A + ++PQQ+A MAA M E QLM M AGG G G I L+EEE AAV RL ++GFDR + QAYLACDKNEALAANFL++ M G
Sbjct: 2 KLTVKTLQGVSYPIEAELEDTVLSVKGKVEAVNGAAVDNQ-KLIHAGKVLKDDSKLSEYNVKENDFLVVMVTKPKVVRKTAADPAPPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPAAGAPGIVVGEALSETVRQLVDMGFPEDQVRAALQAAFHNPERAVEYLMNGIPEQPAAPPASTTAPASGGLGAPTSLEALRHHPQFDALRRMIQANPSALPTVLQQIGAQNPQLLQLIHQNQEQFVAMLNEPIAEAATPSATPSVPASPFGDSGADGMPTPQQLQQL----MASLSPQQQAAMAAQMGMTYEQLQQFTQMLNTMPPEAMAQLMQQM-AGGEGGHGAPTR------------IHLTEEEAAAVGRLVDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 396
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A5D6YB40_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB40_9STRA) HSP 1 Score: 227 bits (578), Expect = 1.040e-62 Identity = 189/423 (44.68%), Postives = 234/423 (55.32%), Query Frame = 1
Query: 7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTP---------------------------------AAXPVAAAAPNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAARGAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDM 1176
KLTVKT++G F I+ E T V VK IE Q + FP AQ KLIH+G++LKD+S L EY +KE++FLV MVTKPK XXXXXXXXXXXXXXXX XXXX ++ VA NA V+QL EMGFPEDQV AL+AA NPD AVE+LM GIPE + AA A AP A GA +L+ R HPQF+ L++L+Q +P L VLQ IG QSP LL IH+NQ F+A++NEP+ + P ++ + + P+Q+AQMAA M +Q+M SM G GAG XXXXXX I L+EEE AA+ RL ++GFDR +A QAYLACDKNEALAANFL++ M
Sbjct: 2 KLTVKTLQGVAFSIDAEPTDTVASVKATIETQQS-FPVAQQKLIHAGKVLKDESPLAEYNVKENDFLVVMVTKPKAPKPSXXXXXXXXXXXXXXXXTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGIVADEQMNAT-VQQLCEMGFPEDQVRQALQAAFNNPDRAVEYLMNGIPETVAPPAATAAAP-LAGGAANSLEALRNHPQFDALRQLIQANPAALPAVLQQIGGQSPELLRLIHQNQDQFVAMLNEPI--TTPSSSVPAATGAAPLDFGGLGGGGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPDQLRGLSQMLSNLPPGAMEQMMASM---GGDGAGXXXXXXXGGHR-----IMLTEEEAAAIDRLCDMGFDRNEAVQAYLACDKNEALAANFLMDSM 411
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A485KDA0_9STRA (Aste57867_4066 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDA0_9STRA) HSP 1 Score: 225 bits (573), Expect = 4.180e-62 Identity = 191/427 (44.73%), Postives = 231/427 (54.10%), Query Frame = 1
Query: 7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------TTPAAXPVAAAAPNA--DHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAAR-----------GAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 1182
KLTVKT++G + I+ E V VK +E N P Q KLIH+G++LKD+S L EY IKE++FLV MVTKPK XXXXXXXXXXXXXXXX TTPA A D +RQL +MGFPE+QV AL+AA NPD AVE+LM GIPE PA P + GA +L+ R HPQF+ L+RL+Q +P L VLQ IG QSP LL IH+NQ F+A++NEP+ ESA PA + ++PQQ+A MAA M XXXXXXXXXXXXXXE Q+M M GG G+ I L+EEE AAV RL ++GFDR + QAYLACDKNEALAANFL++ M G
Sbjct: 2 KLTVKTLQGVAYSIDAELDETVESVKRKVEGVNGAAPENQ-KLIHAGKVLKDESKLSEYNIKENDFLVVMVTKPKVVRKTATEPXXXXXXXXXXXXXXXXAATAXXXXXXXXXXXXXXXXXAATATTPAVGAAGLVVGEALNDTIRQLCDMGFPEEQVRLALQAAFNNPDRAVEYLMNGIPER------PAAPPASXXXXXXXXXXXVFGAPNSLEALRNHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHQNQEQFVAMLNEPIAESAAPAGGVPASPFGDADAGGMPTPQQLQQL------MASLSPQQQAAMAAQMGMTPDXXXXXXXXXXXXXXEAMAQIMQQMQGGGAAAGGLGAPTR----------IHLTEEEAAAVGRLCDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 405
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A7S4DGQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGQ1_HETAK) HSP 1 Score: 226 bits (575), Expect = 4.280e-62 Identity = 211/423 (49.88%), Postives = 250/423 (59.10%), Query Frame = 1
Query: 7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------TTPAAXPVAAAAPNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSR--AAPAQAPGAAR--GAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------LQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGV-IRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMG 1179
KL VKT+ GK F I++E++ EVK I + + PA KLIH+G+ILKDD TL E I EF+VCM +KPK XXXXXX XXXXXXX T + P + N + V+QL +MGFPEDQV AALRAAMGN DVAVEFLM GIPE +P+ AA A + GAA G LD R HPQ N LKRLVQ +P L +VLQ IG QSP LLA IH NQ +F+ +MNEPVDESAP A XXXXXXXXXXXXXXXXXXXXXXXXXX L + QRAQ+A ++ EQ QQ+M AGM XXXXXXX IRL+++E AV RL ++GF+R + QAYLACDKNEA+AAN L++ MG
Sbjct: 2 KLNVKTLDGKNFSIDIEESKTFAEVKDAIAEARPDLPADTQKLIHAGKILKDDQTLAEVNIGATEFIVCM-SKPKKPARASPAXXXXXXAXXXXXXXAAPVTPXXXQXXXXXXXXRPAGEAAATNTSTPAQSNYENPETVQQLVDMGFPEDQVKAALRAAMGNGDVAVEFLMNGIPEGLPTNPAAAGASSGGAAASTGTGHPLDALRRHPQLNALKRLVQSNPGALQQVLQQIGAQSPELLATIHANQEEFVRMMNEPVDESAPAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPAIMARMMQLASLPEAQRAQVAQSLGIPADQLNQFVNLMRMMPPEQLQQIMA---------AGMGXXXXXXXGLPPGATTIRLTQDEADAVNRLCDMGFNRNNVMQAYLACDKNEAMAANLLMDGMG 414
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A1Z5KBW7_FISSO (UV excision repair protein RAD23 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW7_FISSO) HSP 1 Score: 224 bits (571), Expect = 8.910e-62 Identity = 184/413 (44.55%), Postives = 224/413 (54.24%), Query Frame = 1
Query: 7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPAAX---------------PVAAAAPNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAARGAMET--LDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDE--SAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGGG 1188
KLTVKT+KG KF +EVE+T V+E K IE++ E A+ LKLIHSG++LKD+ T+ IK ++FLV MVTK K XXXXXXXXXXXXXXXXXXXXXX X P + + V LT MGFPE +V LRAA GNPDVAVEFL GIP+ + S A A +A A T L R HPQFN+L+RLVQ +P L +VL IGQQ P LL I+ +Q F+ +MNEPV S+ P + +Q M+P + QMA M EQ QQ M M G G V+RL+EEE AAV RLTE+GFDR++AAQA+LACDKNEALAAN L++ MG GG
Sbjct: 2 KLTVKTLKGAKFDVEVEETHTVQEAKSAIEKEKPELVASTLKLIHSGKVLKDEDTIASCGIKPNDFLVVMVTKAKKPAATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTRTDTFSQEAVDNLTAMGFPEAEVRHCLRAAQGNPDVAVEFLTNGIPDAV-SAAMNATESSSATPAQATQPLQALRNHPQFNELRRLVQSNPQMLQQVLAQIGQQQPELLEEINSHQALFLEMMNEPVTAAPSSAPTGSRAPTASSESASGMGMPMEGMGNPAQMAQMIQSMSPAELDQMAQMMGLSSDQLRMTAQMLGQMPPEQLQQFMAHMGGGEGHGGQQ--------------VLRLTEEEMAAVDRLTEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDGG 399 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig192.20.1 >prot_P-littoralis_Contig192.20.1 ID=prot_P-littoralis_Contig192.20.1|Name=mRNA_P-littoralis_Contig192.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=477bp MVKLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQback to top mRNA from alignment at P-littoralis_Contig192:77722..86585+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig192.20.1 ID=mRNA_P-littoralis_Contig192.20.1|Name=mRNA_P-littoralis_Contig192.20.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8864bp|location=Sequence derived from alignment at P-littoralis_Contig192:77722..86585+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig192:77722..86585+ >mRNA_P-littoralis_Contig192.20.1 ID=mRNA_P-littoralis_Contig192.20.1|Name=mRNA_P-littoralis_Contig192.20.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1431bp|location=Sequence derived from alignment at P-littoralis_Contig192:77722..86585+ (Pylaiella littoralis U1_48)back to top |