mRNA_P-littoralis_Contig192.20.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig192.20.1
Unique NamemRNA_P-littoralis_Contig192.20.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: D7FMK9_ECTSI (UV excision repair protein RAD23B homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK9_ECTSI)

HSP 1 Score: 500 bits (1287), Expect = 8.570e-167
Identity = 351/483 (72.67%), Postives = 366/483 (75.78%), Query Frame = 1
Query:    1 MVKLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPAAXPVAAAAP-------NADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAARGAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGGGLSAFQAPAPTPAAAPAAPATAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADPSADGNNPSGGGDEDEDMYG 1428
            MVKLTVKTIKGKKFQIEVEQT  VREVKGVIE+QNAEFPAAQLKLIHSGQILKD+ TL EY+IKE+EFLVCMVTKP XXXXXXXXXXXXXXXXXX           T AA P AA A        NADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIP+NI + AAPAQA  A  GAMETL+DFRGHPQFN+LKRLVQRDPTQLS +LQMIG+QSP LLARIHENQGDFIALMNEP++ESAPPAAAA   XXXXX                    LQGM+P QRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGM              VIRLSEEEGAAVARLTELGF+RTDAAQAYLACDKNEALAANFLLNDMG G   AFQAPAP PA     P TA     XXXXXXXX                         +PSA GNNP GGGDEDEDMYG
Sbjct:    1 MVKLTVKTIKGKKFQIEVEQTQTVREVKGVIEEQNAEFPAAQLKLIHSGQILKDECTLAEYKIKEEEFLVCMVTKPXXXXXXXXXXXXXXXXXXX-----------TAAAAPAAAPAXXXXXXXXNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPDNIQAAAAPAQAAAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPINESAPPAAAAGNAXXXXXFGPMMGSGGQANNPAQVAQLLQGMSPAQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGIPPGAGGAGGN-VIRLSEEEGAAVARLTELGFERTDAAQAYLACDKNEALAANFLLNDMGAGMPPAFQAPAPVPA-----PPTAATPATXXXXXXXXSDSTAPSATENPADPSPATGESSPTNPSAGGNNPQGGGDEDEDMYG 466          
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: B7FSN5_PHATC (RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSN5_PHATC)

HSP 1 Score: 238 bits (607), Expect = 8.200e-67
Identity = 187/433 (43.19%), Postives = 234/433 (54.04%), Query Frame = 1
Query:    7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPAAXP---VAAAAP---------------------NADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAA---------PAQAPGAARGAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAA------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGGG 1188
            KL VKT+KG+KF+I  E++  V +VKG+IE   +E  A  LKLIHSG++LKD+ ++    IKE++FLV MVTK K                              PAA P   VAAAA                      +A+ V  LT MGFPE +V   LRAA GNPD+AVEFL  GIPE +   AA         P+ +  ++ G+ + L   R HPQFNDL+RLVQ +P  L +VL  IGQQ P LL  I+ NQ  F+ +MNEPV+ SA  +AA      +                            +QGM+P++  QMAA MXXXXXXXXXXXXXXXXX  EQ  Q M     GG     M              V+RL+EEE AAV RL E+GFDR++AAQA+LACDKNEALAAN L++ MG GG
Sbjct:    2 KLLVKTLKGEKFEIHAEESQTVADVKGIIEATKSELSAGTLKLIHSGKVLKDEDSIASAGIKENDFLVVMVTKAKKPVAAKPAATPTP----------------VPAATPGPPVAAAASIEXXXXXXXXXXXXPTRADDVSAEAVANLTSMGFPEAEVKHCLRAAHGNPDIAVEFLTNGIPEGVAEAAAAMNTSAVTSPSASSESSSGSGQPLQALRNHPQFNDLRRLVQSNPQMLQQVLTQIGQQQPQLLQEINANQALFLQIMNEPVESSASVSAAPAVSGSSDAPSLGGLDSGAAAMMEGMGNPAQMAQMIQGMSPEELNQMAAMMXXXXXXXXXXXXXXXXXPPEQLSQFMMQAMGGGEGPESMGGSQ----------VLRLTEEEMAAVDRLAEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDGG 408          
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A8J2SQ80_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQ80_9STRA)

HSP 1 Score: 230 bits (586), Expect = 5.150e-64
Identity = 189/396 (47.73%), Postives = 236/396 (59.60%), Query Frame = 1
Query:   16 VKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPA-AXPVAAAAPNADHVRQLTEMGFP-EDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAARGAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGGGLSA 1197
            VKT++G+ F++E      ++ VK +IE    E  AA +KLIHSG++LKDD TL +  + E  FLVCMVTKPK   XXXXXXXXXXXXXXXXXXXXXXXXX     A P      + + + QL  MGF  E+Q  AALRAAMGN D+AVEFLM GIPE  PS+        AA      L   R HPQF++L+R +Q +P  L +VLQ +G++ P LL  I +NQ +F+A+MNEPV E+  PA  A                            +Q ++PQQRAQ+AA +                   EQ +QL+G++  GGMP      XXXXXXXX    V+RL+ EE  AV RL ELGF R DAAQAYLACDKNE+LAAN L +  GGGG +A
Sbjct:    5 VKTLEGRLFKVEAAPEASIKAVKDIIETSQPELKAAMMKLIHSGKVLKDDETLADKGVTEQSFLVCMVTKPKRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPQNDEFVSPEALAQLNAMGFGHEEQSRAALRAAMGNVDMAVEFLMNGIPEEQPSQNVEMTEAQAA----SPLAVLRSHPQFDELRRTIQANPASLQQVLQGLGREDPQLLQTIKDNQAEFLAMMNEPVQEA--PAMGAGGDDLDAAQFARA---------------MQSISPQQRAQLAATIGLTPEQFEQFSQQMQNMPREQLRQLLGALGGGGMP---RGAXXXXXXXXPPQNVVRLTREEAEAVGRLCELGFSREDAAQAYLACDKNESLAANLLFDGFGGGGPTA 376          
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A6G0WDE9_9STRA (UV excision repair protein RAD23 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDE9_9STRA)

HSP 1 Score: 229 bits (585), Expect = 5.600e-64
Identity = 189/414 (45.65%), Postives = 227/414 (54.83%), Query Frame = 1
Query:    7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------TTPAAXPVAAAAPNA--DHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAARGAM---ETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 1182
            KLTVKT++G    IE E    V  VK  +E  N      Q KLIH+G++LKD+S L EY IKE++FLV MVTKPK                XXXXXXXXXXXX                  TPAA         A  D +RQL +MGFPE+QV  AL+AA  NPD AVE+LM GIPE     A PA AP AA G +    +L+  R HPQF+ L+RL+Q +P  L  VLQ IG QSP LL  IH NQ +F+ ++NEP+ ESA PAA A                            +  ++PQQ+A MAA M        XXXXXXXXXXX    Q+M +M AGG  GA                 I L+EEE AAV RL ++GFDR +  QAYLACDKNEALAANFL++ M G
Sbjct:    2 KLTVKTLQGVAHAIEAELEDTVLSVKHKVEAVNGAAVENQ-KLIHAGKVLKDESKLAEYNIKENDFLVVMVTKPKVVRKPPTEPTPAPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPAAGAEGLVVGEALNDTIRQLCDMGFPEEQVRVALQAAFNNPDRAVEYLMNGIPEQ--PAAPPASAPAAASGGLGAPNSLEALRSHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHANQEEFVRMLNEPIAESAAPAAGASPFGDADAGGMPSPQQLQQL--------MASLSPQQQAAMAAQMGMTPDQLQXXXXXXXXXXXXXXAQMMQNMQAGGGVGAPTR--------------IHLTEEEAAAVGRLCDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 390          
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A6T7K158_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7K158_9STRA)

HSP 1 Score: 230 bits (586), Expect = 6.900e-64
Identity = 191/401 (47.63%), Postives = 235/401 (58.60%), Query Frame = 1
Query:   10 LTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPAAXPVAAAAPNADH-----VRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAARGAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEP--VDESAPPAAA---AXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXG----VIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLN 1170
            LTVKT+KG KF ++   +  V +VKG+IE   +E PAA +KLIHSG++LKD  ++E   IK  +FLV M+TK K   XXXXXXXXXXXXXXXXXXXXXXXXX    A   A AAP AD      +  LT MGFPE +  A LRAA GNPD+AVEFLM GIP  + ++ A A    ++ G  E L   R HPQF+ L+RLVQ +P  L  VL  IGQQ P LL  I+ NQ  F+ +MNEP  VD +A P+ A   +                            LQ M+P +  +MA+ M                   EQFQ+ M  M A    G GM      XXXXXX G    ++RL+E+E AAV RLTE+GFDR DAAQA+LACDKNEALAAN L++
Sbjct:    3 LTVKTLKGGKFTVDAAPSSTVADVKGLIEAAKSELPAATMKLIHSGKVLKDADSIESCNIKPTDFLVVMITKAKKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATEPAVAAPPADDFPAEVINNLTGMGFPEAEARACLRAASGNPDIAVEFLMNGIPPAVQAQQAAATTGSSSSG--EPLAALRSHPQFDALRRLVQSNPQTLQAVLTQIGQQQPELLREINANQAQFLEMMNEPIAVDPAAAPSVAPTVSSPAAPTGTGGMPAGLMEGMGNPAQMAQMLQSMSPNELNEMASMMNLSPEQLTATAQMISQMPPEQFQEYM--MQAMQQGGGGMGMPGMMXXXXXXGGSQPQMLRLTEDEMAAVDRLTEMGFDRADAAQAFLACDKNEALAANLLMD 399          
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A024TCU4_9STRA (UV excision repair protein RAD23 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCU4_9STRA)

HSP 1 Score: 227 bits (578), Expect = 5.970e-63
Identity = 177/413 (42.86%), Postives = 221/413 (53.51%), Query Frame = 1
Query:    7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------TTPAAXPVAAAAPNA--DHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAAR-GAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 1182
            KLTVKT++G  + IE E    V  VKG +E  N      Q KLIH+G++LKDDS L EY +KE++FLV MVTKPK              XXXXXXXXXXXXXX                  +TPAA         A  + VRQL +MGFPEDQV AAL+AA  NP+ AVE+LM GIPE   +  A   AP +   GA  +L+  R HPQF+ L+R++Q +P+ L  VLQ IG Q+P LL  IH+NQ  F+A++NEP+ E+A P+A                              +  ++PQQ+A MAA M                   E   QLM  M AGG  G G                I L+EEE AAV RL ++GFDR +  QAYLACDKNEALAANFL++ M G
Sbjct:    2 KLTVKTLQGVSYPIEAELEDTVLSVKGKVEAVNGAAVDNQ-KLIHAGKVLKDDSKLSEYNVKENDFLVVMVTKPKVVRKTAADPAPPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPAAGAPGIVVGEALSETVRQLVDMGFPEDQVRAALQAAFHNPERAVEYLMNGIPEQPAAPPASTTAPASGGLGAPTSLEALRHHPQFDALRRMIQANPSALPTVLQQIGAQNPQLLQLIHQNQEQFVAMLNEPIAEAATPSATPSVPASPFGDSGADGMPTPQQLQQL----MASLSPQQQAAMAAQMGMTYEQLQQFTQMLNTMPPEAMAQLMQQM-AGGEGGHGAPTR------------IHLTEEEAAAVGRLVDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 396          
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A5D6YB40_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB40_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.040e-62
Identity = 189/423 (44.68%), Postives = 234/423 (55.32%), Query Frame = 1
Query:    7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTP---------------------------------AAXPVAAAAPNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAARGAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDM 1176
            KLTVKT++G  F I+ E T  V  VK  IE Q + FP AQ KLIH+G++LKD+S L EY +KE++FLV MVTKPK     XXXXXXXXXXXXXXXX   XXXX                                    ++  VA    NA  V+QL EMGFPEDQV  AL+AA  NPD AVE+LM GIPE +   AA A AP  A GA  +L+  R HPQF+ L++L+Q +P  L  VLQ IG QSP LL  IH+NQ  F+A++NEP+  + P ++                              +  + P+Q+AQMAA M                      +Q+M SM   G  GAG XXXXXX         I L+EEE AA+ RL ++GFDR +A QAYLACDKNEALAANFL++ M
Sbjct:    2 KLTVKTLQGVAFSIDAEPTDTVASVKATIETQQS-FPVAQQKLIHAGKVLKDESPLAEYNVKENDFLVVMVTKPKAPKPSXXXXXXXXXXXXXXXXTPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGIVADEQMNAT-VQQLCEMGFPEDQVRQALQAAFNNPDRAVEYLMNGIPETVAPPAATAAAP-LAGGAANSLEALRNHPQFDALRQLIQANPAALPAVLQQIGGQSPELLRLIHQNQDQFVAMLNEPI--TTPSSSVPAATGAAPLDFGGLGGGGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPDQLRGLSQMLSNLPPGAMEQMMASM---GGDGAGXXXXXXXGGHR-----IMLTEEEAAAIDRLCDMGFDRNEAVQAYLACDKNEALAANFLMDSM 411          
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A485KDA0_9STRA (Aste57867_4066 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDA0_9STRA)

HSP 1 Score: 225 bits (573), Expect = 4.180e-62
Identity = 191/427 (44.73%), Postives = 231/427 (54.10%), Query Frame = 1
Query:    7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------------------TTPAAXPVAAAAPNA--DHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAAR-----------GAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGG 1182
            KLTVKT++G  + I+ E    V  VK  +E  N   P  Q KLIH+G++LKD+S L EY IKE++FLV MVTKPK         XXXXXXXXXXXXXXXX                         TTPA          A  D +RQL +MGFPE+QV  AL+AA  NPD AVE+LM GIPE       PA  P +             GA  +L+  R HPQF+ L+RL+Q +P  L  VLQ IG QSP LL  IH+NQ  F+A++NEP+ ESA PA                               +  ++PQQ+A MAA M     XXXXXXXXXXXXXXE   Q+M  M  GG    G+               I L+EEE AAV RL ++GFDR +  QAYLACDKNEALAANFL++ M G
Sbjct:    2 KLTVKTLQGVAYSIDAELDETVESVKRKVEGVNGAAPENQ-KLIHAGKVLKDESKLSEYNIKENDFLVVMVTKPKVVRKTATEPXXXXXXXXXXXXXXXXAATAXXXXXXXXXXXXXXXXXAATATTPAVGAAGLVVGEALNDTIRQLCDMGFPEEQVRLALQAAFNNPDRAVEYLMNGIPER------PAAPPASXXXXXXXXXXXVFGAPNSLEALRNHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHQNQEQFVAMLNEPIAESAAPAGGVPASPFGDADAGGMPTPQQLQQL------MASLSPQQQAAMAAQMGMTPDXXXXXXXXXXXXXXEAMAQIMQQMQGGGAAAGGLGAPTR----------IHLTEEEAAAVGRLCDMGFDRNEVIQAYLACDKNEALAANFLMDSMSG 405          
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A7S4DGQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGQ1_HETAK)

HSP 1 Score: 226 bits (575), Expect = 4.280e-62
Identity = 211/423 (49.88%), Postives = 250/423 (59.10%), Query Frame = 1
Query:    7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------TTPAAXPVAAAAPNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSR--AAPAQAPGAAR--GAMETLDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------LQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGV-IRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMG 1179
            KL VKT+ GK F I++E++    EVK  I +   + PA   KLIH+G+ILKDD TL E  I   EF+VCM +KPK        XXXXXX XXXXXXX                          T  + P  +   N + V+QL +MGFPEDQV AALRAAMGN DVAVEFLM GIPE +P+   AA A + GAA   G    LD  R HPQ N LKRLVQ +P  L +VLQ IG QSP LLA IH NQ +F+ +MNEPVDESAP A   XXXXXXXXXXXXXXXXXXXXXXXXXX          L  +   QRAQ+A ++                   EQ QQ+M          AGM XXXXXXX        IRL+++E  AV RL ++GF+R +  QAYLACDKNEA+AAN L++ MG
Sbjct:    2 KLNVKTLDGKNFSIDIEESKTFAEVKDAIAEARPDLPADTQKLIHAGKILKDDQTLAEVNIGATEFIVCM-SKPKKPARASPAXXXXXXAXXXXXXXAAPVTPXXXQXXXXXXXXRPAGEAAATNTSTPAQSNYENPETVQQLVDMGFPEDQVKAALRAAMGNGDVAVEFLMNGIPEGLPTNPAAAGASSGGAAASTGTGHPLDALRRHPQLNALKRLVQSNPGALQQVLQQIGAQSPELLATIHANQEEFVRMMNEPVDESAPAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPAIMARMMQLASLPEAQRAQVAQSLGIPADQLNQFVNLMRMMPPEQLQQIMA---------AGMGXXXXXXXGLPPGATTIRLTQDEADAVNRLCDMGFNRNNVMQAYLACDKNEAMAANLLMDGMG 414          
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Match: A0A1Z5KBW7_FISSO (UV excision repair protein RAD23 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBW7_FISSO)

HSP 1 Score: 224 bits (571), Expect = 8.910e-62
Identity = 184/413 (44.55%), Postives = 224/413 (54.24%), Query Frame = 1
Query:    7 KLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQILKDDSTLEEYEIKEDEFLVCMVTKPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPAAX---------------PVAAAAPNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPENIPSRAAPAQAPGAARGAMET--LDDFRGHPQFNDLKRLVQRDPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDE--SAPPAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGMNPQQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMXXXXXXXXXXXXXGVIRLSEEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGGG 1188
            KLTVKT+KG KF +EVE+T  V+E K  IE++  E  A+ LKLIHSG++LKD+ T+    IK ++FLV MVTK K      XXXXXXXXXXXXXXXXXXXXXX     X               P      + + V  LT MGFPE +V   LRAA GNPDVAVEFL  GIP+ + S A  A    +A  A  T  L   R HPQFN+L+RLVQ +P  L +VL  IGQQ P LL  I+ +Q  F+ +MNEPV    S+ P  +                             +Q M+P +  QMA  M                   EQ QQ M  M  G   G                 V+RL+EEE AAV RLTE+GFDR++AAQA+LACDKNEALAAN L++ MG GG
Sbjct:    2 KLTVKTLKGAKFDVEVEETHTVQEAKSAIEKEKPELVASTLKLIHSGKVLKDEDTIASCGIKPNDFLVVMVTKAKKPAATPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTRTDTFSQEAVDNLTAMGFPEAEVRHCLRAAQGNPDVAVEFLTNGIPDAV-SAAMNATESSSATPAQATQPLQALRNHPQFNELRRLVQSNPQMLQQVLAQIGQQQPELLEEINSHQALFLEMMNEPVTAAPSSAPTGSRAPTASSESASGMGMPMEGMGNPAQMAQMIQSMSPAELDQMAQMMGLSSDQLRMTAQMLGQMPPEQLQQFMAHMGGGEGHGGQQ--------------VLRLTEEEMAAVDRLTEMGFDRSEAAQAFLACDKNEALAANLLMDSMGDGG 399          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMK9_ECTSI8.570e-16772.67UV excision repair protein RAD23B homolog n=1 Tax=... [more]
B7FSN5_PHATC8.200e-6743.19RAD23 n=3 Tax=Phaeodactylum tricornutum TaxID=2850... [more]
A0A8J2SQ80_9STRA5.150e-6447.73Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6G0WDE9_9STRA5.600e-6445.65UV excision repair protein RAD23 n=1 Tax=Aphanomyc... [more]
A0A6T7K158_9STRA6.900e-6447.63Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A024TCU4_9STRA5.970e-6342.86UV excision repair protein RAD23 n=2 Tax=Aphanomyc... [more]
A0A5D6YB40_9STRA1.040e-6244.68Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A485KDA0_9STRA4.180e-6244.73Aste57867_4066 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S4DGQ1_HETAK4.280e-6249.88Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1Z5KBW7_FISSO8.910e-6244.55UV excision repair protein RAD23 n=2 Tax=Fistulife... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig192contigP-littoralis_Contig192:77722..86585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FMK9
Preferred nameRad23
PFAMsUBA,XPC-binding,ubiquitin
Model size2457
Max annot lvl2759|Eukaryota
KEGG koko:K10839,ko:K18180
KEGG Pathwayko03420,ko04141,ko04714,map03420,map04141,map04714
Hectar predicted targeting categoryother localisation
GOsGO:0002020,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010604,GO:0015630,GO:0016579,GO:0019222,GO:0019538,GO:0019899,GO:0019900,GO:0030162,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031593,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032991,GO:0033554,GO:0034641,GO:0036211,GO:0042176,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043900,GO:0043902,GO:0043903,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045069,GO:0045070,GO:0045732,GO:0045787,GO:0045862,GO:0046483,GO:0048518,GO:0048522,GO:0048524,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0051726,GO:0060255,GO:0061136,GO:0065007,GO:0065008,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0140030,GO:1901360,GO:1901363,GO:1901564,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903900,GO:1903902,GO:1990381,GO:2000058,GO:2000060
Exons7
Evalue2.19e-172
EggNOG OGsCOG5272@1|root,KOG0011@2759|Eukaryota
Ec32 ortholog descriptionUV excision repair protein RAD23B homolog
Ec32 orthologEc-23_000690.1
Descriptiondamaged DNA binding
Cds size1431
COG categoryO
BRITEko00000,ko00001,ko03029,ko03051,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig192.20.1prot_P-littoralis_Contig192.20.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig192 77722..85559 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789923.4912703-CDS-P-littoralis_Contig192:77721..777901680789923.4912703-CDS-P-littoralis_Contig192:77721..77790Pylaiella littoralis U1_48CDSP-littoralis_Contig192 77722..77790 +
1680789923.5095973-CDS-P-littoralis_Contig192:81933..820891680789923.5095973-CDS-P-littoralis_Contig192:81933..82089Pylaiella littoralis U1_48CDSP-littoralis_Contig192 81934..82089 +
1680789923.5202386-CDS-P-littoralis_Contig192:82516..827801680789923.5202386-CDS-P-littoralis_Contig192:82516..82780Pylaiella littoralis U1_48CDSP-littoralis_Contig192 82517..82780 +
1680789923.5296624-CDS-P-littoralis_Contig192:83293..835891680789923.5296624-CDS-P-littoralis_Contig192:83293..83589Pylaiella littoralis U1_48CDSP-littoralis_Contig192 83294..83589 +
1680789923.5434344-CDS-P-littoralis_Contig192:84155..842731680789923.5434344-CDS-P-littoralis_Contig192:84155..84273Pylaiella littoralis U1_48CDSP-littoralis_Contig192 84156..84273 +
1680789923.552278-CDS-P-littoralis_Contig192:84465..846781680789923.552278-CDS-P-littoralis_Contig192:84465..84678Pylaiella littoralis U1_48CDSP-littoralis_Contig192 84466..84678 +
1680789923.5630736-CDS-P-littoralis_Contig192:85244..855591680789923.5630736-CDS-P-littoralis_Contig192:85244..85559Pylaiella littoralis U1_48CDSP-littoralis_Contig192 85245..85559 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789923.572801-UTR-P-littoralis_Contig192:85559..865851680789923.572801-UTR-P-littoralis_Contig192:85559..86585Pylaiella littoralis U1_48UTRP-littoralis_Contig192 85560..86585 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig192.20.1

>prot_P-littoralis_Contig192.20.1 ID=prot_P-littoralis_Contig192.20.1|Name=mRNA_P-littoralis_Contig192.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=477bp
MVKLTVKTIKGKKFQIEVEQTLKVREVKGVIEQQNAEFPAAQLKLIHSGQ
ILKDDSTLEEYEIKEDEFLVCMVTKPKPAAAAPAAAAAPAPSPAPTSAEA
APAPATTPAAAPVAAAAPNADHVRQLTEMGFPEDQVTAALRAAMGNPDVA
VEFLMTGIPENIPSRAAPAQAPGAARGAMETLDDFRGHPQFNDLKRLVQR
DPTQLSRVLQMIGQQSPTLLARIHENQGDFIALMNEPVDESAPPAAAAAP
AGGMGGLGSMMGAGGQPSSPAQVAQMLQGMNPQQRAQMAAAMGLSPQQLA
QVSQVIGQLPQEQFQQLMGSMNAGGMPGAGMGGMPPGAGGAGAGGVIRLS
EEEGAAVARLTELGFDRTDAAQAYLACDKNEALAANFLLNDMGGGGLSAF
QAPAPTPAAAPAAPATAVPASTASSDSVSPSASAESAPDSTSASPPSASV
EATPADPSADGNNPSGGGDEDEDMYG*
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mRNA from alignment at P-littoralis_Contig192:77722..86585+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig192.20.1 ID=mRNA_P-littoralis_Contig192.20.1|Name=mRNA_P-littoralis_Contig192.20.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8864bp|location=Sequence derived from alignment at P-littoralis_Contig192:77722..86585+ (Pylaiella littoralis U1_48)
ATGGTTAAACTCACGGTGAAGACAATCAAGGGTAAAAAGTTCCAGATTGA GGTTGAGCAAACCCTAAAGGTGAGCCTTGGTCCTTGGCTACGATAAGCTA CCTTCGGCATATGTAGACAACAACTTGACATGCATGATGCGTCGACAAAC GTTCTTTACCGCAGTACCAGGTATACAGCAGTCTCTCTCCACGTCGTATA ATGTGTCGCCAAGGCTTTCACGTTGGCACTGCTGCTGAGTTTCTCCCCCT CATCTCTTCAGCATTTGGTATCAGTTGTCAGAGACACTGTACAAAGCCAG GAACGGGTCACGTGACGACGGCGTCCATAATTTTCAAGTATTGCTGTAAT ATCTTTTTACACTTATAAATTCCTGCGTGACCTTCCTCCAGTTTGTGTGC CGGCTGGTTCACCCACTGCTGTGGTATGTGTGTTGTGGTAAATGATACGG AAACGTAGAAAGCGTCCAGAAAAAATGGGATGAAAGCACACAAAACAAAC TGCGGTACGTTGTGTGTGTTGTTGTTGTTGTTGTTGTTGTTGATTCTCAC ACTAGCTCACTGCCACCGCAGTCTAGCCCGTGGTCACAAACCAGGCACAT ATCGTGCTAGGGGGAAAAAAAAATAAAAAAAATATATATATGGACTATGA TCACCCACAGTCAAGTCAGATATGGTACCGTTGGGGTACCATCTGTGGTG GCCAGAGTACCAAACAAATACAGAAAAAAATAACAGGCTCGAAAGAAAAA CAAAAATTGGAAACAGTCCAACAAACAAAAAATAACCAAGACAAAGCTCA ACCATAACCATATACTTCGAAGTACTTCGTACATCGAACCAGGGCCCAGG GCCATGACAGACCAAGGCAAACGCAAACCAGGGCGATGGTCCTGTAACTA TAAGATCAATAGACGAAAGACAAAAATAAAATAGAAAAGAAGAAGATTAC AGGGAGGGCACGAAGACTGAGAGAGTGCACTCGTAGACAAACACAACAAA CAGGCCGCCAAACAAAGAGGAAGCAGGGGAACGAAAAGGGAAAAGAAGAC CGGAAGTACCGGAAGTCGGGGGGGGGGGGGAGGAGATCAAAAATAAAATA AAAGGCATGCAATCAATCGCAAACATGTCTTGCCACGAGGTCTGCCTGTT CACGCTTGCTCTCCTCAGTCGCACTCATGCCTCCTGCTACTGGCACCACC GTACCCAGTTGTTTCTGCCCCACATCTTTAGCAGCAGCTACACCACCACT CCGCCCTACAAGTATTCCACTCCGGCCACCCCGTAGCTTGGCATTGGACT GCTTCTTCTTGTGCTGTGCAACTCCAACCCCACTACCCCGCTGCCCTTGT GCCCCCCCGTCCGCTGCCCTTGTGCCCCCTCGTACTCCTCCTCTCGTTTA TCCCCGCCATCCGTTCTCCCTCTTTTGGTCAAGGCCTGGCCCTCAGCCGC GTCCCTCTCCCTTTTCCGTCGACGTGTCTCTGATAAGTCTCCCTCTTTCT TGAGCCACTCGTCCGTGAACCGCCGCGCACCCTCGTCGATCCTGTCGTAC CACTCGTCAGCTCTCTTGGCACTTGCCTCCCACCCCTCTTTTTTGTCGAC CACGATGTCGAACGCTTCGAGGTCCTCCTGCATTCGCCTCAGCCAGTCAA ACTCTTGCCCCCCCACATACCTCGCTCCCCCCTGCAATTCTCCCAAAAGA GCAATTTTCGGGAGTCTCTCGTCTCTCATGCGCGCAACGAATCCTGCGAA GCACAGTCGCCGCTTGCGCACGGTGGCCTCAACGCTCTCGTTGCAACCCG CGGTGATCAGGGCTTTGGCGTAGGAGAGGGGTCGGTCTGTTCTCTCCCTC TTTTTCCATCCGATGCAGCGAAGGAGGAAGAAGTAGTGGGCTGACCGAAG CTTGCGGTACTCCGCTGGCTTCAGATTCCATGTGACACACCCGTATAGGA GGGTCTCCACGACTTCAGCTTGGAGGAGTCGTACTTTTAGTCGAAGAGGG GCCCCCGGGCGGTCGTACATTGCCTGGCTGTTGCGCCGGAAGCAGGCGTG CGCTCGCTGCACTTGGTGGTTAATCTCGCCCTCAATGCTACTGTCCTCAC AAATCTTACCCCCGAGATAAACAAAGTCTTTCTTCTGCTTGAAGACCATC CCGGCAGCGTCGATCGTGAACGAGCACGCCTCCATCCCTTTCGCGAGCAT ACACATGGTCTCCGTCTTGGGTTCTGACACCAACAGCCCAAACCGCCCGG CCACACGTACGATGATCGACATCATCTTCTCAGGGCTCCGAGGTGATTAA GATACAATACAGGCGTCGTCGGCGTAGAGCATACTCCAGATGGACTTCAC TGCCTCCACCAGTCGGGCGTTCCTCCCCTTCCCCTTCGTCACCTTCCTCT TGACCTTGGCCATGTCCGCCATCACCTCCGCGTCCTTGCTGATCTCGGCA AAGGCCACCATGAGCATCGCAGCAAAGAAAAGGTTGAACAGCAGGGGTGC CAGATTGCATCCCTGTCGGAGTCCCTGCCCCACATCAAACCAGTCGGAGC ACCTCCCGTCGTCCATCCGTACGCATGCTCTCATTCCGTCGTGGAATTGG CGAATGACCGCAAGCATCTTGGGGGGCACTCCGAGCCGCTTGAGCACCGA CCACAGTAGTTCCCGGTCTACAGAGTCGTAGGCTTTCGTGAGATCGATAA AGCAGGCGTACAGTGGGTGTGTGTGTCTGTGTGTGTCGGTGTGCCTGTGT GTGTGCGTGTGTGTCTGTGTGTGTGGGCTCATGCATAATGCTTGAAGTAT GTCAAAGTACATATTATATGATACAGGAGAAAGAACGACACTTCAAAAAG TAATTACCCCAACCCTTAGCCTTAAGGGTTGCCTGACAAGGGCGGTAAAA AATTCCTTACTGAAAAAACAATTTTTTTATCTGAAAAGAACATTTTCACT CTTTAATCAAGTCAAAAGAGCTTATTTTGATAAGGCTTAAACACGGGCTG TCGTCTGTGCGTACCCGATAACAAGAATTAAAGCAGGAGAAGACGTTATG CAGTAGCTTCATCTGCGTCGGCGCATTCAGATCTTCTAATGGGGCTTAGT TATCGAAGTTCGCAGCATTAGCACAAGAACTCCGCAGGATCCCTGAAAAA CTCCGCAATCCGGACTGACGCTAAACGTTTGACGCAGCTGTACTCGCCGC CATCGGCATCAATCTTCTGAACTGCGGTTCGTCCGATGTAGCTATTGGCA TGAGCTACTGCTGTTGACCCGTAGTTTTGGAGGTTAGGGTATGTGGCGTC GAGTACAGCAGTGGGAGATAGCACAGCAGTGGAAGATGATTTTTGGAATC TGTCCATTTTGCGGAGTTTATGATCCTCCACTGCGACCATCGATACCTAG GCCCCAGCAGCAGCTCTGAATGCGCCGACGCAGATTTAGCTACTACATGA CGTCTTCTCCTGATTTAATCCTTGTTATCGGGTACGCACAGACGACAGCC CATGTTTAAGCCTTATCAAAATAAGCTCTTTTGACTTGATTTTAGAGTCT CAATTTTTTATCTTGATATTTATCTAAGAGATTGGAGGTAGACATGTGAT ATGCATGTGAAGAAGAGCCCCCGCCGCCGCTGTGTGCGATAACCAACCAT TTTCCTCTTTCCCGACACCTTCCTACTGGTGTGAGGTACCCCGTGTGTAA GTGTCAGGGCCCGTTCACTGTTGTTCAAAATCCGTGCCTCTCGACGATCG GTTGTCAGGGAACCCTTAATAGTTGCTAGTTTGATGACCGTATTTAACAG ACTTATGAAAGTATGGGCGGAACCGTAAGCCAGAGCAGGTGAGCGTGTGT CATCCCATTTATTCTGGGCACCCGCTACACCTTTGGGTATGATGTGGGTG CTTCAGCCGGGGTCACATAAGAGCCTCACCCCAAATCCACTACTTACGTT GTACTTGAGTGGACCCATGTGCAGGTTGAGTGCGGTCAAGTCACAAATCT TCACGCTTAACACTCCCTGGTATGTGAAAGCCCAGCGTTGGGAGTTTCAC AGAGGTGAAGCCCCCCTGCCGGCGCAGGAGGCCTCACCCCAAATCCGTAT CGTAACCACACACTGTGCTTTGAACTGAAGAACTTCGTACGAAGTACTTG TACTTCGTATACTGGCACGTATTACTTCGAAGTACACACGATTTGGCACG TTCATTTTCCAGGTTCGGGAGGTTAAAGGGGTCATCGAACAGCAAAACGC CGAGTTCCCGGCGGCCCAGCTGAAGCTTATCCACTCCGGCCAGATCCTGA AGGATGATTCCACGCTGGAGGAATACGAGATCAAGGAGGATGAGTTCTTG GTATGCATGGTGACCAAGGTGCGACGGATTTCAAATCAGGAAAATGAGGC GTGACTGTTCGTTGTTCCTCCTACTCCCGCGGGGGGCGACTGCTGTTGCC ACTGCCCGGTAGCGGGGAGCTACTTTTTCCAATAGCCAAAAGCAAATTTT TGTTCGAGATATTTTTAAGGAAACCGGGTGCTCTGAGAACCTCTAATCTT GCATGCAGTAGTCACATTTTCGCTGCAGGAGCGCAGCAGACGTCGATGTC AAGGTGGACCTCTTGCGAGAAGTCTCCTGACACCGGACCAACGTGCACAA TGTGCACCATTATCATACTCCCACGTGCTTCCAGCCCACTGCTGTACATC CCACCAATGATAGCGTGACTGTCTTGGTTGGATATTCTCCCCACCGGCTC TTCTTCGATTTCGCCATGAATGCGTTCGAACATCCGACATTTCAGCCCAA GCCAGCCGCCGCTGCACCGGCCGCAGCGGCCGCTCCTGCGCCATCCCCCG CCCCTACATCGGCGGAAGCAGCACCTGCACCCGCCACTACACCGGCCGCC GCACCCGTTGCGGCAGCCGCTCCCAACGCCGACCATGTTCGGCAGCTCAC TGAAATGGGGTTCCCGGAAGACCAGGTGACGGCCGCACTGCGTGCTGCCA TGGGCAACCCCGACGTCGCTGTGGAATTCCTCATGACCGGAATTCCGGAA AACATTCCGGTGCGTACGCAGCCTGCATGCAGCGGATTTTTGCAGTTTGT ACATGAACAAACTCAGGCCTTCATTCTTCACTAAATACCCGGAGAAGCTC TGGCATTTTGCAAGTGCAATACTGTTTTGCGTTCGTCGACTAGACATTCA GCGAGCTCAACAAACTCAGGCGGCCGGCGTTTCCAGCAGTCAAACTACCA TCCCCATTTTACAAAGCATTTGTAATAACAAATCATAGCAAAAGCCGCTG ATCTCGCCCACCTCGGCTGTTGTTCGCTTCCGATTTGATGAGGCAACTCC CCAAGTTTCATAATGCTTAGTCCTATTTCGGTTTTACGGGCCAGTTACGT GTGTTCAATTCTAGGGGACGGTCCATCGGTATACCAAGAACAAACCCCTA TCTTTGAACAAATATTCGCAAAAGCGGTTCCGGGACAGCAGTATGTCTGA ATATCATTTACAGTGTTGACGAGGTACAAATGCTGACCCGTCTTTGTCGC CACACCGACGTAGGTCGCCCAGTCTAGGGCTGCCCCTGCACAGGCGCCCG GAGCAGCTCGAGGAGCCATGGAAACACTGGATGACTTCCGCGGGCACCCG CAATTCAACGACTTAAAGCGCTTGGTACAGCGTGACCCCACACAGCTCTC CCGAGTCCTGCAGATGATCGGGCAGCAGAGCCCGACACTGCTTGCTCGCA TCCACGAAAATCAGGGAGACTTTATCGCGTTGATGAATGAGCCCGTCGAT GAGTCTGCCCCCCCTGCAGCGGCTGCCGCACCTGCCGGTGGCATGGGCGG CCTTGGCTCGATGATGGGGTGCGTACAAATACATTCAGTGTTCGCACAAT GTCCACTCACATAACTTTGCTTTTCTAGGGCATCCCACAAATTATTTGAT GACCGGCAGCTTTGACAACGCCTTGACGATATTCTGAACAAGAGCATAAT CGCCCAAGTATACTTCAAGTCTTTTGATCGTTTTGGCCCAACACTGACAT CGAGAGGGGCTGCAGCTGTATCCCACTCTGCCATAAATCGGACATCATAG CGGGTGAAGGCAACGCGGACTCGGACCAAGAACGCTCCGATAAAGATCGT TTGTAAAGCAGTGCATACAAAGTACCGTAGTCCAATGACATATCGGCCCT TGTGTCGTGCTTCCGATTTTGCGCAACAGCTCTTCAAGGCTAGCGCTTGT CCACCAATCTTCTGCAGACATGGTGCACCGGTAGTTGAAAGCCCTTCAGA TAACGAAGACACAGCCACACGTCTTGCTGTACCTGCCGAAGCGATCTACC TACCTAGAGTGATCACATGTTGGCACTTCTTTCACTGGTCTGCAGTGACT CTCACAGCCTCCTTTTTTATTTCTGTGTCGTCAGGGCCGGAGGCCAACCA AGCAGCCCTGCCCAGGTGGCTCAAATGCTGCAAGGTATGAACCCGCAGCA GCGAGCACAAATGGCTGCAGCAATGGGATTGTCTCCGCAGCAGCTCGCAC AGGTGACCGTGGTTTTGCGTCGAACCTCACGTATTCCGACGCTTGTTACC ATATATCCTTGACTGGCATACCCCGTCTCTGCTGTACTGTCGGGGCACTT TGAAAAGTCAATTGAAGTTTACGCACACGCCATTTCAAACGTTTGTTGTT GGCCGATCATCACTCGTTTTTACCATCTGCCGATGCGCTCCTAGGTGAGC CAGGTGATAGGTCAACTACCGCAAGAGCAGTTCCAACAGTTGATGGGGTC GATGAATGCCGGGGGGATGCCTGGTGCTGGGATGGGAGGTATGCCTCCAG GAGCCGGCGGTGCTGGCGCTGGCGGCGTGATTCGTCTTTCAGAGGAAGAA GGAGCGGCTGTGGCTCGCCTTACCGAGCTAGGATTCGACAGAACAGATGC AGCGCAGGTGCGTTGGCCCTCGGTCGGCCCTTATCTAGTCTTGACTGTCC CGTGGCCATTCGCGCAGCCCACGCACTCGTCAAGTAAGGGCGCAACTGCT ACAGACAGCTGTGCTGTCAGGACTAAAAGGTGCTCGCTTCAACATGCAGG AGTACGACCTATGAATACACCCACAACTGTTTGTATATTGCTCCCGTGGG AAGGCCGTCTACACCATGTGCTGTACGAATCTAATTCGGTAAAATATTCT CGTATGCAGCGGCAAGCCTTTCCGTTCGGAGTGTTTTTTTTTTGCAGGAT GGATCCCTTTGAAATATGTGGATTCATCGATAGACGTTAGCTTACATTCA AGCCTTGGTGACTGCCAACCTTCCTCGGGGGAAAATGCCGTTTTCTGAGT CGGAACTTCCGCTTCCAACATGACATGTGTGCGACAGCACCATCAACCAG CCCGGTTCAGGAATTGCGAACCACGGACGTGACACTAAGCACGAGAAGTA GATATCGTAAGGAACCCAAAACATGGCGCTCCCCCGCACGCCCCTCCCCG ATCGCATATTTGATTGATCCCAGGCGTATTTAGCTTGCGACAAGAATGAG GCACTCGCAGCAAATTTCCTTCTCAACGATATGGGTGGAGGAGGCCTGTC CGCCTTCCAAGCGCCCGCTCCCACCCCTGCAGCCGCTCCCGCCGCCCCAG CGACCGCGGTGCCGGCCTCTACGGCTAGTAGCGATTCGGTAAGCCCGTCA GCTTCGGCGGAATCTGCACCTGATTCAACCTCGGCTTCTCCTCCCTCTGC CAGCGTAGAGGCAACCCCTGCAGACCCATCTGCGGATGGCAACAATCCGA GTGGAGGTGGTGACGAAGACGAAGACATGTACGGGTAGATTATGGGGCAT CATATGCTATTTGCCGGGGAGGGTTCCCAAGTTGAGGTTGAACGCGCTGT TGAATTCAAGACCAATACTGTCTATGGTTGCTCTGTCGTGTTTATTCTCA GAAATTTATGGTCATTTTTGAGATCCAATCGCCGCCGACTCTCTGTTTGT ACTTTCGTTCGACGGGCACCTCAACGTTTGTCAAGGGGTGCGAGGTAGTC GTCGGGGCGTATCGCCAGGTATTTTTGTTATTTGCACGCCGAATACTGTT TTCGACTTCAGCCTCGAGCATTTGAGAATGCAAGCTTGCTGTGCTACGCA GGCCAGTCGAGCGTTTTTGAATAAGCGTCTTCAATTCTAGCCTAGACACG AAGCACGTTCCTCGCGTCGCGTACCAATGACCACGCACAGCAGTGACAAA CGTACAGCTGTGTCCATTGGTCTGAGCGCGTGTTGCGGAAGGCCGTTTTT TCAGTCGGCCTACATTCGCACGGCCCATGTTGCTGTCTTGAATCACGGTT CCACCAACCGCGACGAGAAAGTCGCGATTAATGAAGGCCAGATCTGAGCC TGGGGCTGCTCGGGTATGGCTGTTGTACGTACGTATTTTCAGCGGAGGGA CGGGCGCAGAGGTAAGCCTTTCCACTGTGCGTCGATTTTGGGAGGTCAGG GACATGCAGCGATGACGGCTCACAGGCTACTACTTACATGTCCGTCATCG TACCCTGCATCTTCACAGGGATGATTCCCTGTTCGAGTGTTTCTGCCTGT ATGTCGATTGTTTCTCAGTCTTTCCTTCCAGGAAAGTAGGTTCACGCGGC CTTGTGTGTGTTTGGGGACGATGTCTTCTAGCATGGAACTGATTTTGTAC TCCTACCGAGTTCATTTTTAACTGTGGCGTTCGTGCAGCTTTTGTCACTT CGTTGCTCTATCGTCGTAGACAAAGTCCAGACACAACTAGATCTTGACCA TTTCATGTACCTTTTGCGATTCCACAACGAACGTTTTAATGTTTTGGCTC TTCGATACTTGGTA
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Coding sequence (CDS) from alignment at P-littoralis_Contig192:77722..86585+

>mRNA_P-littoralis_Contig192.20.1 ID=mRNA_P-littoralis_Contig192.20.1|Name=mRNA_P-littoralis_Contig192.20.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1431bp|location=Sequence derived from alignment at P-littoralis_Contig192:77722..86585+ (Pylaiella littoralis U1_48)
ATGGTTAAACTCACGGTGAAGACAATCAAGGGTAAAAAGTTCCAGATTGA
GGTTGAGCAAACCCTAAAGGTTCGGGAGGTTAAAGGGGTCATCGAACAGC
AAAACGCCGAGTTCCCGGCGGCCCAGCTGAAGCTTATCCACTCCGGCCAG
ATCCTGAAGGATGATTCCACGCTGGAGGAATACGAGATCAAGGAGGATGA
GTTCTTGGTATGCATGGTGACCAAGCCCAAGCCAGCCGCCGCTGCACCGG
CCGCAGCGGCCGCTCCTGCGCCATCCCCCGCCCCTACATCGGCGGAAGCA
GCACCTGCACCCGCCACTACACCGGCCGCCGCACCCGTTGCGGCAGCCGC
TCCCAACGCCGACCATGTTCGGCAGCTCACTGAAATGGGGTTCCCGGAAG
ACCAGGTGACGGCCGCACTGCGTGCTGCCATGGGCAACCCCGACGTCGCT
GTGGAATTCCTCATGACCGGAATTCCGGAAAACATTCCGTCTAGGGCTGC
CCCTGCACAGGCGCCCGGAGCAGCTCGAGGAGCCATGGAAACACTGGATG
ACTTCCGCGGGCACCCGCAATTCAACGACTTAAAGCGCTTGGTACAGCGT
GACCCCACACAGCTCTCCCGAGTCCTGCAGATGATCGGGCAGCAGAGCCC
GACACTGCTTGCTCGCATCCACGAAAATCAGGGAGACTTTATCGCGTTGA
TGAATGAGCCCGTCGATGAGTCTGCCCCCCCTGCAGCGGCTGCCGCACCT
GCCGGTGGCATGGGCGGCCTTGGCTCGATGATGGGGGCCGGAGGCCAACC
AAGCAGCCCTGCCCAGGTGGCTCAAATGCTGCAAGGTATGAACCCGCAGC
AGCGAGCACAAATGGCTGCAGCAATGGGATTGTCTCCGCAGCAGCTCGCA
CAGGTGAGCCAGGTGATAGGTCAACTACCGCAAGAGCAGTTCCAACAGTT
GATGGGGTCGATGAATGCCGGGGGGATGCCTGGTGCTGGGATGGGAGGTA
TGCCTCCAGGAGCCGGCGGTGCTGGCGCTGGCGGCGTGATTCGTCTTTCA
GAGGAAGAAGGAGCGGCTGTGGCTCGCCTTACCGAGCTAGGATTCGACAG
AACAGATGCAGCGCAGGCGTATTTAGCTTGCGACAAGAATGAGGCACTCG
CAGCAAATTTCCTTCTCAACGATATGGGTGGAGGAGGCCTGTCCGCCTTC
CAAGCGCCCGCTCCCACCCCTGCAGCCGCTCCCGCCGCCCCAGCGACCGC
GGTGCCGGCCTCTACGGCTAGTAGCGATTCGGTAAGCCCGTCAGCTTCGG
CGGAATCTGCACCTGATTCAACCTCGGCTTCTCCTCCCTCTGCCAGCGTA
GAGGCAACCCCTGCAGACCCATCTGCGGATGGCAACAATCCGAGTGGAGG
TGGTGACGAAGACGAAGACATGTACGGGTAG
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