prot_P-littoralis_Contig190.28.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig190.28.1
Unique Nameprot_P-littoralis_Contig190.28.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length601
Homology
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: A0A6H5KRX1_9PHAE (Homeobox domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRX1_9PHAE)

HSP 1 Score: 421 bits (1081), Expect = 1.540e-136
Identity = 299/526 (56.84%), Postives = 344/526 (65.40%), Query Frame = 0
Query:   76 LSRCSSPNSFMRMPEQNPLDTYPNDTHVVGSSNLLPYNVSCDINNLDPLSSFLASGRSDSDPFGFGVGSVADGTFGGRKPTPEELLLFRSHRLLQAEAVGVAIGGPSIATSSSPNATHVHKRFGLVSAALARQIRMKVLEQTNAAVDRVRGLGAGALPTQQEDVIDAERRNCHRMLAGILDAATSTLKEIVPTSCGGGLGGVAGSMVGTVGSALPSSLLGSPVTESQQLASTWEDATTTSSMNLLDNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILHHMTPGMGRSSVFAVTQVRDRSSNXXXXXXXXXXXXXXXXGAHFGGGGMYQEGVGASFNSGGGVVVPTGHNSSHTRLFGSSLDAGIGSSPPGR---GKGGTAKRTTSNTVKGKKKSTLLSKM----GSTSRQTSAANNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVRRCRTKKIGLATGPEQITYPES-QSFPKALAVNR 593
            L R SSP  FM   +Q PL  YP D  V+  ++  P++ S      DPLS FL+SGR        G+GSVADGTFGGRK TPEEL+LFRSHRLLQAEAVGVAIG   + +S   +A +V KR  LVS A+ RQ+R+KVLEQTNAAV+ VR LG GA P QQ+ VI+AERRNCHR+L+G+LD  T+TLKE+  T  GGG G V+  M   +  ALP S LGSP TESQQLASTWEDA T+SS       XXXXXXXXXXXXXXXXXXXXXXXXX                     SILHHM PG GRSSVFA+TQ+RDR  +                    G  GM Q+G+GASF SGGG   P GH+        +  D  +  +  G    G GG  KR TSN  K K +S LL K       T  + S  NNRKGSRHRLTPQAKEILE WLAKHWLNPYPTEE+K+ LAQ+C ITVTQVNNWMMNVRVRRCRTKKIGLATGPE+ITY  + ++ PKALA NR
Sbjct:   70 LGRVSSPILFMGH-QQQPLP-YPPDAQVISFTDPYPHDDS------DPLSFFLSSGRGXXXXXXXGLGSVADGTFGGRKATPEELMLFRSHRLLQAEAVGVAIG--PLHSSGGADAAYVRKRLRLVSTAVERQLRLKVLEQTNAAVEGVRALGEGAPPAQQQSVINAERRNCHRVLSGVLDEGTATLKELSTTG-GGGQGDVSVDM--GMDMALPPSALGSPATESQQLASTWEDAATSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------SILHHMPPGTGRSSVFALTQMRDRPQHHHSQLGMALGSTRME-----GADGMKQQGMGASFGSGGGAAAPPGHDHGGLSDPSAGFDGDLWGATGGGASVGGGGRGKRATSNVGKAKNRSGLLKKTPPSDAVTDPRRSVYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYTAAGKATPKALAANR 556          
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: D7FSL4_ECTSI (Transcription factor protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL4_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 1.680e-106
Identity = 239/514 (46.50%), Postives = 276/514 (53.70%), Query Frame = 0
Query:   90 EQNPLDTYPNDTHVVGSSNLLPYNVSCDINNLDPLSSFLASGRSDSDPFGFGVGSVADGTFGGRKPTPEELLLFRSHRLLQAEAVGVAIGGPSIATSSSPNATHVHKRFGLVSAALARQIRMKVLEQTNAAVDRVRGLGAGALPTQQEDVIDAERRNCHRMLAGILDAATSTLKEIVPTSCGGGLGGVAGSMVGTVGSALPSSLLGSPVTESQQLASTWEDATTTSSMNLLDNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILHHMTPGMGRSSVFAVTQVRDRSSNXXXXXXXXXXXXXXXXGAHFGGGGMYQEGVGASFNSGGGVVVPTGHNSSHTRLFGSSLDAGIGSSPPGRGKGGTAKRTTS-----NTVKGKKKSTLLSKMGSTSRQTSAA----NNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVRRCRTKKIGLATGPEQITYPES-QSFPKALAVNR 593
            +Q PL  YP D  V+      P++ S      DPLS FL+SGR        G+GSVADGTFGGRK TPEEL+LFRSHRLLQAEAVGVAIG   +  S   NA +V KR GLVS A+ RQ+R+KVLEQTN AV+ VR LG GA P QQ+ VI+AERRNCHR+L+G+LD  T+TL+E+  T  GGGLGGV+  M   +G A P S LGSP TESQQL                                                                         GM   S    T++                          G GGM Q+G+GASF SGGG V P GHN  H  L   S                            N  K KK+S LL K   +   T +     NNRKGSRHRLTPQAKEILE WLA HWLNPYPTEE+K+ LAQ+C ITVTQVNNWMMNVRVRRCRTKKIGLATGPE+ITY  + ++ PKALA NR
Sbjct:    4 QQQPLP-YPPDAQVLSFPEPYPHDDS------DPLSFFLSSGRGXXXXXXXGLGSVADGTFGGRKATPEELMLFRSHRLLQAEAVGVAIG--PLHPSGGANAAYVRKRLGLVSTAVERQLRLKVLEQTNTAVEGVRALGEGAPPAQQQSVINAERRNCHRVLSGVLDEGTATLRELSTTG-GGGLGGVSVDM--GMGMAFPPSALGSPATESQQL-------------------------------------------------------------------------GMALGS----TRME-------------------------GAGGMKQQGMGASFGSGGGAVAPPGHN--HGGLSDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXNVGKAKKRSGLLKKTPPSDALTDSRRPVYNNRKGSRHRLTPQAKEILEGWLANHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYAAAGKATPKALAANR 401          
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: UPI0019394CFA (homeobox protein PKNOX2-like isoform X1 n=2 Tax=Styela clava TaxID=7725 RepID=UPI0019394CFA)

HSP 1 Score: 68.9 bits (167), Expect = 7.760e-9
Identity = 34/60 (56.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:  502 NNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVR 561
            NNRK  R  L  QA EIL SWL  H ++PYPTE+EK TLA    +T+ QVNNW +N R R
Sbjct:  240 NNRKSKRGVLPKQATEILRSWLFSHIVHPYPTEDEKRTLAAQTNLTLLQVNNWFINARRR 299          
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: Q0ZPQ6_NEMVE (NVHD036-TALE class homeobox protein (Fragment) n=3 Tax=Nematostella vectensis TaxID=45351 RepID=Q0ZPQ6_NEMVE)

HSP 1 Score: 62.0 bits (149), Expect = 1.070e-8
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
Query:  503 NRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVR 561
            ++K  R  L  QA  I+++WL +H ++PYPTE+EK ++AQ   +T+ QVNNW +N R R
Sbjct:    1 SKKSKRGVLPKQATSIMKTWLFQHIMHPYPTEDEKRSIAQQTNLTILQVNNWFINARRR 59          
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: T1EK84_HELRO (Homeobox domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EK84_HELRO)

HSP 1 Score: 61.2 bits (147), Expect = 1.890e-8
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 0
Query:  511 LTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVR 561
            L  QA  +L++WL KH L+PYPTEEEK +LA    ++  QVNNW +N R R
Sbjct:    7 LPKQATRVLKTWLFKHLLHPYPTEEEKKSLADHTNLSALQVNNWFINARRR 57          
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: H2ZDB0_CIOSA (Homeobox domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZDB0_CIOSA)

HSP 1 Score: 67.0 bits (162), Expect = 4.410e-8
Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 0
Query:  503 NRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVRRCRTKKIGLATGPEQITYPESQSFPKA 588
            +RK  R  L  QA EIL SWL  H ++PYPTE+EK TLA    +T+ QVNNW +N R RR     +  A+ P+  T P +   PKA
Sbjct:  248 SRKTKRGVLPKQATEILRSWLFSHIVHPYPTEDEKRTLATQTNLTLLQVNNWFINAR-RRILQPMLD-ASNPDPTTLPAAS--PKA 329          
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: D2V5D6_NAEGR (Homeobox protein PKNOX1-like protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V5D6_NAEGR)

HSP 1 Score: 67.4 bits (163), Expect = 5.400e-8
Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 0
Query:  484 KSTLLSKMGSTSRQTSAANNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVRRCRTKKIGLATGPEQITYPESQSFPK 587
            K   L+K+ ST   T   + R+G+   L   A  +L+SWL  H+L+PYPTE EK  L     +T+TQVNNW +N RVR  R     +  G ++     S S P+
Sbjct:  564 KDKYLTKILSTQENTLMRSKRRGN---LPRHATNVLKSWLYSHFLHPYPTESEKKDLCMETGLTLTQVNNWFINQRVRTWRPMLESMLDGDQKDKATPSSSKPQ 664          
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: A0A151Z9H2_9MYCE (Putative homeobox transcription factor n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z9H2_9MYCE)

HSP 1 Score: 67.0 bits (162), Expect = 6.050e-8
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0
Query:  508 RHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVRRCRTKKIGLATGP 574
            R +L  +A  IL+ WL +H ++PYPTEEEKVTLA+S  ++ +Q+NNW  N R R    + I   TGP
Sbjct:  478 RGKLPSEATTILKKWLFEHNMHPYPTEEEKVTLARSTSLSFSQINNWFTNARRRILPRQSIPPTTGP 544          
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: A0A077WBY5_9FUNG (Homeobox domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WBY5_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 6.960e-8
Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = 0
Query:  493 STSRQTSAANNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVR 561
            STS  TS+ ++ K  R  L      IL  WLAKH  +PYPTEEEKV LAQ   +T+ Q++NW +N R R
Sbjct:  197 STSDITSSVSHTKKRRGNLPKPVTAILRDWLAKHKTHPYPTEEEKVALAQQTNLTINQISNWFINARRR 265          
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: A0A068RNT1_9FUNG (Homeobox domain-containing protein n=1 Tax=Lichtheimia corymbifera JMRC:FSU:9682 TaxID=1263082 RepID=A0A068RNT1_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 7.090e-8
Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 0
Query:  473 RTTSNTVKGKKKSTLLSKMGSTSRQTSAANNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVR 561
            R++S T+K +  S L +   + S  TS+ N+ K  R  L      IL  WLAKH  +PYPTE+EKV LAQ   +T+ Q++NW +N R R
Sbjct:  179 RSSSGTIKKQSSSALPTT--ACSNMTSSINHTKKRRGNLPKPVTAILRDWLAKHKKHPYPTEDEKVALAQQTNLTINQISNWFINARRR 265          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRX1_9PHAE1.540e-13656.84Homeobox domain-containing protein n=1 Tax=Ectocar... [more]
D7FSL4_ECTSI1.680e-10646.50Transcription factor protein n=1 Tax=Ectocarpus si... [more]
UPI0019394CFA7.760e-956.67homeobox protein PKNOX2-like isoform X1 n=2 Tax=St... [more]
Q0ZPQ6_NEMVE1.070e-845.76NVHD036-TALE class homeobox protein (Fragment) n=3... [more]
T1EK84_HELRO1.890e-852.94Homeobox domain-containing protein n=1 Tax=Helobde... [more]
H2ZDB0_CIOSA4.410e-846.51Homeobox domain-containing protein n=1 Tax=Ciona s... [more]
D2V5D6_NAEGR5.400e-838.46Homeobox protein PKNOX1-like protein n=1 Tax=Naegl... [more]
A0A151Z9H2_9MYCE6.050e-847.76Putative homeobox transcription factor n=1 Tax=Tie... [more]
A0A077WBY5_9FUNG6.960e-849.28Homeobox domain-containing protein n=1 Tax=Lichthe... [more]
A0A068RNT1_9FUNG7.090e-842.70Homeobox domain-containing protein n=1 Tax=Lichthe... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 345..368
NoneNo IPR availableGENE3D1.10.10.60coord: 477..562
e-value: 1.1E-19
score: 72.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..508
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..508
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 387..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..100
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 57..382
NoneNo IPR availablePANTHERPTHR11850:SF57HOMEOBOX PROTEIN 9coord: 57..382
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 491..561
NoneNo IPR availablePANTHERPTHR11850:SF57HOMEOBOX PROTEIN 9coord: 491..561
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 504..569
e-value: 3.7E-9
score: 46.4
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 502..565
score: 12.632757
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 505..567
e-value: 1.67153E-14
score: 66.1128
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 522..561
e-value: 8.8E-14
score: 51.2
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 504..568

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig190contigP-littoralis_Contig190:164676..172011 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig190.28.1mRNA_P-littoralis_Contig190.28.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig190 164676..172011 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig190.28.1 ID=prot_P-littoralis_Contig190.28.1|Name=mRNA_P-littoralis_Contig190.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=601bp
MAASSSSYGAMLLSSSSGEGGGGGTGGGSPPPIAGCISSNGSSSNSIGAP
TLSATTRDAQQQQQSQQQQQPQQQELSRCSSPNSFMRMPEQNPLDTYPND
THVVGSSNLLPYNVSCDINNLDPLSSFLASGRSDSDPFGFGVGSVADGTF
GGRKPTPEELLLFRSHRLLQAEAVGVAIGGPSIATSSSPNATHVHKRFGL
VSAALARQIRMKVLEQTNAAVDRVRGLGAGALPTQQEDVIDAERRNCHRM
LAGILDAATSTLKEIVPTSCGGGLGGVAGSMVGTVGSALPSSLLGSPVTE
SQQLASTWEDATTTSSMNLLDNHNHNNSSSNSSSSSNIPISLSFLNSMQQ
QSQSQQQQQQQQQQQQQQQSILHHMTPGMGRSSVFAVTQVRDRSSNGNGN
GNGKGNGGGGSGGAHFGGGGMYQEGVGASFNSGGGVVVPTGHNSSHTRLF
GSSLDAGIGSSPPGRGKGGTAKRTTSNTVKGKKKSTLLSKMGSTSRQTSA
ANNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQ
VNNWMMNVRVRRCRTKKIGLATGPEQITYPESQSFPKALAVNRTGRNASS
N
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR008422Homeobox_KN_domain
IPR009057Homeobox-like_sf