mRNA_P-littoralis_Contig190.28.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig190.28.1
Unique NamemRNA_P-littoralis_Contig190.28.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: A0A6H5KRX1_9PHAE (Homeobox domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRX1_9PHAE)

HSP 1 Score: 421 bits (1081), Expect = 1.540e-136
Identity = 299/526 (56.84%), Postives = 344/526 (65.40%), Query Frame = 1 
Query:  226 LSRCSSPNSFMRMPEQNPLDTYPNDTHVVGSSNLLPYNVSCDINNLDPLSSFLASGRSDSDPFGFGVGSVADGTFGGRKPTPEELLLFRSHRLLQAEAVGVAIGGPSIATSSSPNATHVHKRFGLVSAALARQIRMKVLEQTNAAVDRVRGLGAGALPTQQEDVIDAERRNCHRMLAGILDAATSTLKEIVPTSCGGGLGGVAGSMVGTVGSALPSSLLGSPVTESQQLASTWEDATTTSSMNLLDNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILHHMTPGMGRSSVFAVTQVRDRSSNXXXXXXXXXXXXXXXXGAHFGGGGMYQEGVGASFNSGGGVVVPTGHNSSHTRLFGSSLDAGIGSSPPGR---GKGGTAKRTTSNTVKGKKKSTLLSKM----GSTSRQTSAANNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVRRCRTKKIGLATGPEQITYPES-QSFPKALAVNR 1779
            L R SSP  FM   +Q PL  YP D  V+  ++  P++ S      DPLS FL+SGR        G+GSVADGTFGGRK TPEEL+LFRSHRLLQAEAVGVAIG   + +S   +A +V KR  LVS A+ RQ+R+KVLEQTNAAV+ VR LG GA P QQ+ VI+AERRNCHR+L+G+LD  T+TLKE+  T  GGG G V+  M   +  ALP S LGSP TESQQLASTWEDA T+SS       XXXXXXXXXXXXXXXXXXXXXXXXX                     SILHHM PG GRSSVFA+TQ+RDR  +                    G  GM Q+G+GASF SGGG   P GH+        +  D  +  +  G    G GG  KR TSN  K K +S LL K       T  + S  NNRKGSRHRLTPQAKEILE WLAKHWLNPYPTEE+K+ LAQ+C ITVTQVNNWMMNVRVRRCRTKKIGLATGPE+ITY  + ++ PKALA NR
Sbjct:   70 LGRVSSPILFMGH-QQQPLP-YPPDAQVISFTDPYPHDDS------DPLSFFLSSGRGXXXXXXXGLGSVADGTFGGRKATPEELMLFRSHRLLQAEAVGVAIG--PLHSSGGADAAYVRKRLRLVSTAVERQLRLKVLEQTNAAVEGVRALGEGAPPAQQQSVINAERRNCHRVLSGVLDEGTATLKELSTTG-GGGQGDVSVDM--GMDMALPPSALGSPATESQQLASTWEDAATSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------SILHHMPPGTGRSSVFALTQMRDRPQHHHSQLGMALGSTRME-----GADGMKQQGMGASFGSGGGAAAPPGHDHGGLSDPSAGFDGDLWGATGGGASVGGGGRGKRATSNVGKAKNRSGLLKKTPPSDAVTDPRRSVYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYTAAGKATPKALAANR 556
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BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: D7FSL4_ECTSI (Transcription factor protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL4_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 1.680e-106
Identity = 239/514 (46.50%), Postives = 276/514 (53.70%), Query Frame = 1 
Query:  268 EQNPLDTYPNDTHVVGSSNLLPYNVSCDINNLDPLSSFLASGRSDSDPFGFGVGSVADGTFGGRKPTPEELLLFRSHRLLQAEAVGVAIGGPSIATSSSPNATHVHKRFGLVSAALARQIRMKVLEQTNAAVDRVRGLGAGALPTQQEDVIDAERRNCHRMLAGILDAATSTLKEIVPTSCGGGLGGVAGSMVGTVGSALPSSLLGSPVTESQQLASTWEDATTTSSMNLLDNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSILHHMTPGMGRSSVFAVTQVRDRSSNXXXXXXXXXXXXXXXXGAHFGGGGMYQEGVGASFNSGGGVVVPTGHNSSHTRLFGSSLDAGIGSSPPGRGKGGTAKRTTS-----NTVKGKKKSTLLSKMGSTSRQTSAA----NNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVRRCRTKKIGLATGPEQITYPES-QSFPKALAVNR 1779
            +Q PL  YP D  V+      P++ S      DPLS FL+SGR        G+GSVADGTFGGRK TPEEL+LFRSHRLLQAEAVGVAIG   +  S   NA +V KR GLVS A+ RQ+R+KVLEQTN AV+ VR LG GA P QQ+ VI+AERRNCHR+L+G+LD  T+TL+E+  T  GGGLGGV+  M   +G A P S LGSP TESQQL                                                                         GM   S    T++                          G GGM Q+G+GASF SGGG V P GHN  H  L   S                            N  K KK+S LL K   +   T +     NNRKGSRHRLTPQAKEILE WLA HWLNPYPTEE+K+ LAQ+C ITVTQVNNWMMNVRVRRCRTKKIGLATGPE+ITY  + ++ PKALA NR
Sbjct:    4 QQQPLP-YPPDAQVLSFPEPYPHDDS------DPLSFFLSSGRGXXXXXXXGLGSVADGTFGGRKATPEELMLFRSHRLLQAEAVGVAIG--PLHPSGGANAAYVRKRLGLVSTAVERQLRLKVLEQTNTAVEGVRALGEGAPPAQQQSVINAERRNCHRVLSGVLDEGTATLRELSTTG-GGGLGGVSVDM--GMGMAFPPSALGSPATESQQL-------------------------------------------------------------------------GMALGS----TRME-------------------------GAGGMKQQGMGASFGSGGGAVAPPGHN--HGGLSDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXNVGKAKKRSGLLKKTPPSDALTDSRRPVYNNRKGSRHRLTPQAKEILEGWLANHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYAAAGKATPKALAANR 401
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BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: UPI0019394CFA (homeobox protein PKNOX2-like isoform X1 n=2 Tax=Styela clava TaxID=7725 RepID=UPI0019394CFA)

HSP 1 Score: 68.9 bits (167), Expect = 7.760e-9
Identity = 34/60 (56.67%), Postives = 40/60 (66.67%), Query Frame = 1 
Query: 1504 NNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVR 1683
            NNRK  R  L  QA EIL SWL  H ++PYPTE+EK TLA    +T+ QVNNW +N R R
Sbjct:  240 NNRKSKRGVLPKQATEILRSWLFSHIVHPYPTEDEKRTLAAQTNLTLLQVNNWFINARRR 299
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BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: Q0ZPQ6_NEMVE (NVHD036-TALE class homeobox protein (Fragment) n=3 Tax=Nematostella vectensis TaxID=45351 RepID=Q0ZPQ6_NEMVE)

HSP 1 Score: 62.0 bits (149), Expect = 1.070e-8
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 1 
Query: 1507 NRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVR 1683
            ++K  R  L  QA  I+++WL +H ++PYPTE+EK ++AQ   +T+ QVNNW +N R R
Sbjct:    1 SKKSKRGVLPKQATSIMKTWLFQHIMHPYPTEDEKRSIAQQTNLTILQVNNWFINARRR 59
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BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: T1EK84_HELRO (Homeobox domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1EK84_HELRO)

HSP 1 Score: 61.2 bits (147), Expect = 1.890e-8
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 1 
Query: 1531 LTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVR 1683
            L  QA  +L++WL KH L+PYPTEEEK +LA    ++  QVNNW +N R R
Sbjct:    7 LPKQATRVLKTWLFKHLLHPYPTEEEKKSLADHTNLSALQVNNWFINARRR 57
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BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: H2ZDB0_CIOSA (Homeobox domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZDB0_CIOSA)

HSP 1 Score: 67.0 bits (162), Expect = 4.410e-8
Identity = 40/86 (46.51%), Postives = 51/86 (59.30%), Query Frame = 1 
Query: 1507 NRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVRRCRTKKIGLATGPEQITYPESQSFPKA 1764
            +RK  R  L  QA EIL SWL  H ++PYPTE+EK TLA    +T+ QVNNW +N R RR     +  A+ P+  T P +   PKA
Sbjct:  248 SRKTKRGVLPKQATEILRSWLFSHIVHPYPTEDEKRTLATQTNLTLLQVNNWFINAR-RRILQPMLD-ASNPDPTTLPAAS--PKA 329
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BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: D2V5D6_NAEGR (Homeobox protein PKNOX1-like protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V5D6_NAEGR)

HSP 1 Score: 67.4 bits (163), Expect = 5.400e-8
Identity = 40/104 (38.46%), Postives = 56/104 (53.85%), Query Frame = 1 
Query: 1450 KSTLLSKMGSTSRQTSAANNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVRRCRTKKIGLATGPEQITYPESQSFPK 1761
            K   L+K+ ST   T   + R+G+   L   A  +L+SWL  H+L+PYPTE EK  L     +T+TQVNNW +N RVR  R     +  G ++     S S P+
Sbjct:  564 KDKYLTKILSTQENTLMRSKRRGN---LPRHATNVLKSWLYSHFLHPYPTESEKKDLCMETGLTLTQVNNWFINQRVRTWRPMLESMLDGDQKDKATPSSSKPQ 664
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BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: A0A151Z9H2_9MYCE (Putative homeobox transcription factor n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z9H2_9MYCE)

HSP 1 Score: 67.0 bits (162), Expect = 6.050e-8
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 1 
Query: 1522 RHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVRRCRTKKIGLATGP 1722
            R +L  +A  IL+ WL +H ++PYPTEEEKVTLA+S  ++ +Q+NNW  N R R    + I   TGP
Sbjct:  478 RGKLPSEATTILKKWLFEHNMHPYPTEEEKVTLARSTSLSFSQINNWFTNARRRILPRQSIPPTTGP 544
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BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: A0A077WBY5_9FUNG (Homeobox domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WBY5_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 6.960e-8
Identity = 34/69 (49.28%), Postives = 43/69 (62.32%), Query Frame = 1 
Query: 1477 STSRQTSAANNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVR 1683
            STS  TS+ ++ K  R  L      IL  WLAKH  +PYPTEEEKV LAQ   +T+ Q++NW +N R R
Sbjct:  197 STSDITSSVSHTKKRRGNLPKPVTAILRDWLAKHKTHPYPTEEEKVALAQQTNLTINQISNWFINARRR 265
[Close]
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Match: A0A068RNT1_9FUNG (Homeobox domain-containing protein n=1 Tax=Lichtheimia corymbifera JMRC:FSU:9682 TaxID=1263082 RepID=A0A068RNT1_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 7.090e-8
Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 1 
Query: 1417 RTTSNTVKGKKKSTLLSKMGSTSRQTSAANNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQVNNWMMNVRVR 1683
            R++S T+K +  S L +   + S  TS+ N+ K  R  L      IL  WLAKH  +PYPTE+EKV LAQ   +T+ Q++NW +N R R
Sbjct:  179 RSSSGTIKKQSSSALPTT--ACSNMTSSINHTKKRRGNLPKPVTAILRDWLAKHKKHPYPTEDEKVALAQQTNLTINQISNWFINARRR 265
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig190.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRX1_9PHAE1.540e-13656.84Homeobox domain-containing protein n=1 Tax=Ectocar... [more]
D7FSL4_ECTSI1.680e-10646.50Transcription factor protein n=1 Tax=Ectocarpus si... [more]
UPI0019394CFA7.760e-956.67homeobox protein PKNOX2-like isoform X1 n=2 Tax=St... [more]
Q0ZPQ6_NEMVE1.070e-845.76NVHD036-TALE class homeobox protein (Fragment) n=3... [more]
T1EK84_HELRO1.890e-852.94Homeobox domain-containing protein n=1 Tax=Helobde... [more]
H2ZDB0_CIOSA4.410e-846.51Homeobox domain-containing protein n=1 Tax=Ciona s... [more]
D2V5D6_NAEGR5.400e-838.46Homeobox protein PKNOX1-like protein n=1 Tax=Naegl... [more]
A0A151Z9H2_9MYCE6.050e-847.76Putative homeobox transcription factor n=1 Tax=Tie... [more]
A0A077WBY5_9FUNG6.960e-849.28Homeobox domain-containing protein n=1 Tax=Lichthe... [more]
A0A068RNT1_9FUNG7.090e-842.70Homeobox domain-containing protein n=1 Tax=Lichthe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig190contigP-littoralis_Contig190:164676..172011 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FSL4
PFAMsHomeobox
Model size1803
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue2.75e-107
EggNOG OGsKOG0774@1|root,KOG0774@2759|Eukaryota
DescriptionDNA-binding transcription factor activity
Cds size1803
COG categoryK
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig190.28.1prot_P-littoralis_Contig190.28.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig190 164676..172011 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789915.377057-CDS-P-littoralis_Contig190:164675..1648281680789915.377057-CDS-P-littoralis_Contig190:164675..164828Pylaiella littoralis U1_48CDSP-littoralis_Contig190 164676..164828 -
1680789915.391353-CDS-P-littoralis_Contig190:165719..1658271680789915.391353-CDS-P-littoralis_Contig190:165719..165827Pylaiella littoralis U1_48CDSP-littoralis_Contig190 165720..165827 -
1680789915.4013271-CDS-P-littoralis_Contig190:166533..1666351680789915.4013271-CDS-P-littoralis_Contig190:166533..166635Pylaiella littoralis U1_48CDSP-littoralis_Contig190 166534..166635 -
1680789915.4111173-CDS-P-littoralis_Contig190:168281..1685441680789915.4111173-CDS-P-littoralis_Contig190:168281..168544Pylaiella littoralis U1_48CDSP-littoralis_Contig190 168282..168544 -
1680789915.423385-CDS-P-littoralis_Contig190:168619..1688871680789915.423385-CDS-P-littoralis_Contig190:168619..168887Pylaiella littoralis U1_48CDSP-littoralis_Contig190 168620..168887 -
1680789915.435188-CDS-P-littoralis_Contig190:171102..1720111680789915.435188-CDS-P-littoralis_Contig190:171102..172011Pylaiella littoralis U1_48CDSP-littoralis_Contig190 171103..172011 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig190.28.1

>prot_P-littoralis_Contig190.28.1 ID=prot_P-littoralis_Contig190.28.1|Name=mRNA_P-littoralis_Contig190.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=601bp
MAASSSSYGAMLLSSSSGEGGGGGTGGGSPPPIAGCISSNGSSSNSIGAP
TLSATTRDAQQQQQSQQQQQPQQQELSRCSSPNSFMRMPEQNPLDTYPND
THVVGSSNLLPYNVSCDINNLDPLSSFLASGRSDSDPFGFGVGSVADGTF
GGRKPTPEELLLFRSHRLLQAEAVGVAIGGPSIATSSSPNATHVHKRFGL
VSAALARQIRMKVLEQTNAAVDRVRGLGAGALPTQQEDVIDAERRNCHRM
LAGILDAATSTLKEIVPTSCGGGLGGVAGSMVGTVGSALPSSLLGSPVTE
SQQLASTWEDATTTSSMNLLDNHNHNNSSSNSSSSSNIPISLSFLNSMQQ
QSQSQQQQQQQQQQQQQQQSILHHMTPGMGRSSVFAVTQVRDRSSNGNGN
GNGKGNGGGGSGGAHFGGGGMYQEGVGASFNSGGGVVVPTGHNSSHTRLF
GSSLDAGIGSSPPGRGKGGTAKRTTSNTVKGKKKSTLLSKMGSTSRQTSA
ANNRKGSRHRLTPQAKEILESWLAKHWLNPYPTEEEKVTLAQSCRITVTQ
VNNWMMNVRVRRCRTKKIGLATGPEQITYPESQSFPKALAVNRTGRNASS
N
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mRNA from alignment at P-littoralis_Contig190:164676..172011-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig190.28.1 ID=mRNA_P-littoralis_Contig190.28.1|Name=mRNA_P-littoralis_Contig190.28.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7336bp|location=Sequence derived from alignment at P-littoralis_Contig190:164676..172011- (Pylaiella littoralis U1_48)
ATGGCGGCGAGCAGCTCATCCTACGGGGCAATGTTGCTGTCATCCTCCTC
GGGGGAAGGCGGCGGCGGCGGTACCGGCGGCGGCAGCCCGCCGCCGATTG
CCGGGTGCATCAGCAGCAACGGCAGCAGCAGCAACAGCATTGGGGCACCA
ACCTTATCGGCCACGACCCGCGACGCCCAGCAGCAGCAGCAGTCGCAGCA
GCAGCAGCAGCCGCAGCAGCAGGAGCTTAGCAGGTGCTCATCCCCAAACT
CCTTCATGAGGATGCCTGAACAAAACCCCCTCGACACCTACCCCAACGAC
ACCCACGTCGTGGGTAGCAGCAACCTCCTGCCCTACAACGTCTCCTGCGA
CATCAACAACCTTGACCCGCTGTCCAGCTTCCTAGCCAGCGGCCGTAGTG
ACAGCGATCCATTCGGGTTCGGCGTGGGCTCCGTCGCCGATGGCACGTTC
GGCGGCCGCAAGCCCACCCCCGAAGAGCTGCTGCTCTTCAGGAGCCACCG
ATTGCTCCAAGCAGAAGCAGTCGGTGTTGCAATCGGCGGCCCATCGATTG
CCACTTCAAGCAGCCCCAATGCAACTCATGTGCACAAGCGGTTCGGCCTT
GTGTCCGCCGCCCTCGCAAGACAGATTAGGATGAAGGTACTCGAGCAAAC
GAACGCGGCGGTGGATCGTGTTCGCGGGTTGGGTGCGGGTGCACTCCCGA
CACAGCAGGAAGACGTGATCGACGCCGAGAGAAGGAACTGTCACCGAATG
CTCGCGGGAATACTCGATGCGGCGACTTCTACGCTGAAGGAGATTGTCCC
GACCAGCTGCGGCGGTGGCTTGGGCGGGGTAGCAGGGAGCATGGTGGGCA
CGGTAGGGTCGGCGCTGCCGTCGTCGTTGCTCGGTTCTCCCGTGACTGAA
TCGCAACAGGTGAGTTCAAATAGTGCTGTTATTCCATTGTATGGCCCATT
GTATTAGACCTGCGTGTTCTTATCCAACGAACAAGTTCTTCATACTTCGA
AGTACAGTAGCTGGGCAAAAACATCCCCGGGGCACGTCGTTGCTCGGTTC
TCTCGTTGCAGAATCACAACAGGCGCGTGACTACTGGTCCGAGGCCTCCT
GCAGTACTGCTGCAGGACAGAGGAAAACACAATACCTATAATCATATGTA
TGCACATTGAGATTTGCAACCAACACGTATATACTACTGCCATATCGCAC
TACTGCTGTGTTGTACAAGCACCAGGTAACAGGAGTAGTACTTCGTTCAA
TATCTGCGACCAATCAAAACGTTCTGCATGCTGTTGGTGGGGAATAGTGA
TCACACACGCCGTGAATAGAGCTCTTTCTCTCTGTTGGTCAGGCTGGACC
TGGGGGTGGTGTACTTTCGGTGTGTCGTTGGTCCATGTGAAACAAACTCC
GAGTACTTGCCTCACGAAGTAGAGTGAAAGTTGAGGGATGCTTTTGTCAG
GGTGGCGCTGTCGGGTAGGCCATTCCGACAGTGGTGGGACATACTTGTTT
CTTCCGAAAAACAAGTAACAGCAAATACCGTTGTCCTTTTTGTTCCTATC
TCCCTTTTTATTCTCTAAGGAACAAAATCAATAACATTTCAGGGTTCGTT
ATATCCTACGTGTGTACGCGAGAGAGGGGGTACTCGTACATGCTAGTGTT
GTTGTTTGAGGGGTGAGTGTTGCTATGGCCTTGGCCGTGGGAAGGGGCTA
ACTACAGGTAACGCAGTAATAGACAAGAGGCTCCACCGACATACTTCACG
CCCGAATCGTGCGGCGAAGCCCCTGTGTTGGTCTTGTGTTCGTTGATGCT
ACAGTGGTGTGAAGTGTGCAACCCTTTGCTGCTCCTTTCGGCACGGAAAA
TATTTCGCATTTTTACTCCAACATTATCGTTCTCGATCACCCCTGACGTT
TTTTTCAACTCCTATTGTCCTTGGTCTCGTTCTCGCTGCCTTCAGATGTC
ACTTATATTTCACCCGGACCATCAAATTACGGACGTTTCTTCCGTACGTT
ATTATTGTTTCGGACTTACAACATCCAGTACACCTGCTATTTTTTCTGGT
CTCATGTCCACAGTTAGGAAGTTCAGTTTAAGAACCTAAGCTCAATAGCC
AGCGCCACGCCGCATCCTAATTCGTACTTTGAAGTACTCAATAGCCTGTA
CTTGGTGGTTGAGACAATATACGGTTTTGAGCCTTGCTCAAGATGGGTAG
TTTTTGCCAATCGGCCGGTACTGCTGTGGAACTCATGTCGTGTGGATCCA
TCCGGCGAGAGCCACCCTTCTGCCGTAGTTTCGTACAAACTGCCAACAAC
AGGCGCTATGTGTAGAATGCAGGCAGACTTCAATAACAACAAGCTTTATG
TGTGGAAGACATACAAAACTTAAACTCATAATAATACATACTCCGTATAT
ACATATTCGAGAGGAGGTAGACGATTGTCAAGACTGTCATTCCGTATTTC
GCTACCACAATGCCGCCAAGACCCAAGTCATCACCCGACTTCCGAGGCCA
ACCCGCTGCACTCATCTTCCGTGTTGTGGTCATTATTTGGTTCTGGCTAA
TTGTTTGATTGTTCAGGTAGTTTTATTTCGCGGTCTGTTGGAGGTTCGAT
GGAGATTGTTATCTCGCTGGCGTTTGCCTGGCGATAAAATAAAACACACT
CCAACAAAAATAAGATGAGACAAAGGCTCAGATGCAAGAACAACAAGGCA
GGGGGGGACCAGGTTATTAAGGCTCCCCTGCGTTTCGTCGCGCTATCCTT
CAAAAGTTCCGCCCACAGGCTTGACATCATTGGACTTTCAAATATGACAG
CGGGGGCCTTGTTTAATCATGGCCACACAAAAAAAAAGATATAGTATGCT
TCGAAGTATCAAACAACACCGTGCCTACCCGCGTGCAATTTTATGATTCA
GAATATTGTCAAGGCCCCCCTTGATATTTTTGCTGGCGTAACATTGTCCT
AACGCCGTTGCAGCAAGTTCGTACCTGTGCGCAAGAGCACAAGGTAAAAT
TATTGTCAAGGCTTCCCTTGCAATGGAAATGTTTGCTACGGTAGTTCCGT
TAAAAAACATGACGGCGGAAATTTTGCTTTCTCACTGCCATCCATGCACG
CTTGTCGCCCTCTACCCCACACAGCTGGCGTCAACCTGGGAAGACGCCAC
AACTACCTCGAGCATGAACCTGCTCGACAACCACAACCACAACAACAGCA
GCAGCAACAGCAGCAGCAGCAGCAACATCCCCATAAGCTTGTCATTCCTA
AACTCCATGCAACAACAGTCACAGTCACAGCAACAGCAACAGCAACAGCA
GCAGCAGCAGCAGCAGCAGCAGTCCATTCTGCACCACATGACCCCCGGCA
TGGGCCGCTCGAGCGTGTTCGCCGTAACGCAAGTTCGGGACCGTTCCCGA
GATCTCCCCCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
TGTCCACCTCGGAATAGGCAGCAGTAATGGTAACGGCAATGGCAACGGCA
AAGGCAACGGCGGCGGCGGCAGCGGCGGTGCTCACTTTGGTGGGGGAGGC
ATGTACCAAGAGGGGGTGGGCGCCAGCTTCAACTCTGGGGGGGGGGTTGT
GGTACCGACCGGGCACAACAGCAGCCATACAAGGCTTTTTGGTTCTTCTC
TCGATGCGGGGATCGGAAGCAGCCCTCCCGGACGGGGCAAAGGGGGCACC
GCAAAACGAACGACGTCCAACACCGTTAAGGTATGATATCGTGCGGCAAT
CGCAGCAATGCGGAACACCAGTATCGAACGCTCCTGAACGAAACTGAGGC
TGCGTTTCTCAGGGAAAGGGTGCGACGTTCTGGCAAGGTTATTACACTAA
GTTAGCAGTGTTAGGAGACACGGTATTTCTAAGAAACACAGGATCAGCCA
AAACAATAAACGTTTCCTTACGCGTGCACTGTTGTGCTGTACAACAGAGC
GGTATGATGAGCCCACCATTCTGTTATTGTGGGGGTAGGGGTGTATTGCT
TGTCACGCCGGAACGCATCTTATTCTGCACCCCGTAGCACAAATTGTACT
TCGAAGGACTGATTTATTTTCACAAATAGGTGGTTTCGAGGTACTTTATT
CGTCACATAATGTAGAGTCCATATTACATCAACCCCCCACCGCATATTGT
ACTGGTGCTTTTTGGAGTCCCCCCCCCCCCCCTTATCTGTGCTTTACACT
TTTCGTTTGCTTGAATTTTACCACAAGATAAGATGCAGTTCGCGCTTCGG
GCTACTCGCAGGACAAATGACAAAGCCTCACTCTTGGTGCCATACGACGT
TGGCCTAGTGGTAATGCGGCGTTGTACGGCCCAGACATTGGAGAGATGAC
AGGAGGTTCACGGTCTGACGACTACGTTATAGACGATCACGAGTACGATA
GCCCCTCCCTATTTCTGCTCGTCCTTCTCCGGCTCGACACCCCCCCTGCT
CAGCCTAGTTGTTCGAAGCTTTGACTTTTCCGGTCACTCATGTAGGGGCT
GAGCACGTAACGGTTTCGGTTTCGGAAATCCATCGATCAAGAGAAAGTTC
AAGACAAGGGTCGAGCTCAAGGGCCAGACAAACATCAGTTTGAAATTGGT
TTGGCCCTGAGCTCCATCCTGAGCTGCCTTAGCTTAAACCGGAGCTTTGT
CGATACATACATCCGAAACTGTCTGGTCACTCCAGATTACTGGGCAATGT
ATCCTCCGGAACCGACCCCCCCCCAGCCGGCACGGCAACCGCCAGCCACG
GACATCAAAAATATGAATAGCCCAGTGCTTGCCTGTAAAGGGATTTACTT
ATTCACGGATAGAGATCATAGCTCTCTGCCTCTCTGTCTCTCTGTCTCTC
TGTCTCTCTCTCCCCCTCTCTTACTCCCTTTCAATTTTGGATAGTTTTCC
GAGCGTCCTTCGTTGGACATGCCTCCAAATACTTCCACGCATGCATGCGT
CCAACGTCTAAAACACGTGCCAGTTCGAGCACTAACATGTTCCTTGAGAG
ACCGCACCCTCCCTCTTCCCCATTGTTATCTTAGTTGACAGTGAACCCAT
TAGGAGTATAGGAACGGTGCTCCGTCTCGAAAGGGATTCTTGGTCAACCA
ATGGTCAAATGATCAAGGCGACCAACAAACGAGCACCCCCTCCCACCCCC
TCCTTTTATTTTGCGTACCCCCCCCGTACGGCCACCGCTGCCAGGATATC
ATCCATTGAACACTACGCCCCCCCCGCCCCTCATTGTCGCATAGCTGCTG
TTACCCTACCCCCCTCCCCTTCACGGCCACCGCTGCCAGGAAAACAGTGA
GCACACACACACACACACATCCTCCCCTACAAGGACTTCCCAACCTGAAC
CGTTTTTCGCCTCTGCACTGCTGTAGGGTAAGAAGAAGTCCACGCTGTTG
AGCAAGATGGGTTCCACCTCCCGGCAGACGTCGGCGGCCAACAACCGCAA
GGGCAGCCGCCACCGCCTCACCCCTCAGGTATACAAAACCAAAACAATTC
TCCGACGGGCTTTTTGGCCGTAATATCCTATCTCAACGACTGCGATATAA
AATCAATTAATTGCTGTGATAAAAAATGGTCAACATCAGCAGAGGAGAAA
CACTCCCACCTGACGCCCACCCCTCATGCATTTAAATACGCATCGTACCA
GGTACTTTTTTCACTCCCACTGTACGACGCTATCTTGTCTGATTGATGAA
TACGAGCTGGAGGTTTTTGGCGACGAGCTTTCAATACTAATATTGTCTGA
TGAATACGGGCTAGAGGGTTTCGGGTGACGAGGTTTCAAATAAACGCGAG
AATCTCTGTCGCAATATAATTGACAACGTGTCGGGAATTCCTTCCAGAGA
GGGCCTCGTACGTTCCGGCCGGGAAATGAAAACACACACTACAGTTGTTG
TATGATATAACAACCCAAAATATTATAGGGTTTACCCCGCGGCAATGATT
TTGGATGTGGCCTGAGCGGGACAAGGCTCTTTCCTCGGTAACGGTTTGGA
TGGGATGGGTCCTTCCGATCGATCACGCAAACTGCGCGGCATTATTACCC
GACTGCAAACATACCGGTTGAAAACAATCGCGGCCGAAACGAACGGCGAC
AAACACCAAAACGATCCAACGAACTGACCTCTAATTTCTGATCGACCCCT
GCTGCTGCAACCTCCTCTCCTCTCCTCTCCCCAGGCCAAGGAAATTCTCG
AGAGCTGGCTCGCCAAGCACTGGCTGAACCCTTACCCTACCGAGGAAGAG
AAGGTCACCCTGGCGCAGAGCTGCCGCATTACTGTCACCCAGGTATGCCA
TTCATGGACATATATCTCTTGGATATAAAACCCGTCTGCTTCGCAAGCTC
TTCCACTCGCTCCCAGCTAAAAGATGCATGTAGCAGGCCTGTCTGCGCAA
GTACGGAATGAGGTTCGTGACATTCCGCAGCGTAGAAATTCCATGTACAC
TTTTATAAACCCTGTACTAGTTCCAAGCATTTGACCTCGCTGACGAGGAA
CACGTCAGCCTGGCGCAGAGTTGCTTCGTCGCGCACCGTCACACAGGGCT
TACTATTGGGTATCTCATCTTAGAAAGGACGCCCGTTTGCTTTATGTACT
CTTTAGTCACTTCGCTCGGTCCCAGTTTTTCTCAGGTGCCTTAGCAGTCG
GGGGTGACCTAGGAGTCACGGGCGTCAACTCATTCTGCGCAAACTATGAT
AGCGATAGTATGTGGCTTCGCTGTCTCGCATATTGAAGCTGTCAGGGTCT
TACGATATACTGTGCTGCTGTAACTGTACACAGTTTTTTTTTCATGGTTG
GCGGGCTTGTACCCACGGGAGGAGTAATGAGAAACTCGCAAACAAACGAA
TCGGGAGAAACAAATGGATGATGGGCATCGCCTAGAGTGCGTGCGTGTGT
ACGTGTGCGTGTGCGTGTGCGCGCGCATACGTGTGTGCGTGCGACCGTGT
TGCTTTCTCGACAGCAACCAAAACATGAAAGCACGGATGCGAGCAACGAA
AGAGTATCTCAGCGAACTACAAAATGTTTGGCACATTACACAATTTTTGG
ACAATGTTTTTTGCCGCGATCCCCTCTCCCATGACCGATCGCAGATGGTT
GTACAATTTTGGTGAATATTGCTAACCATGTGCCTCTGGCGTTCATTTTG
ATATTGCCGACAATGCCCGACCCTCAACACCAGGTGAACAACTGGATGAT
GAACGTCCGCGTAAGGCGCTGCCGCACCAAAAAGATCGGCCTTGCTACCG
GCCCAGAGCAGATCACCTACCCGGAGTCGCAATCGTTTCCCAAGGCGCTG
GCCGTGAACAGAACAGGCCGTAATGCTTCGAGCAAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig190:164676..172011-

>mRNA_P-littoralis_Contig190.28.1 ID=mRNA_P-littoralis_Contig190.28.1|Name=mRNA_P-littoralis_Contig190.28.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1803bp|location=Sequence derived from alignment at P-littoralis_Contig190:164676..172011- (Pylaiella littoralis U1_48)
ATGGCGGCGAGCAGCTCATCCTACGGGGCAATGTTGCTGTCATCCTCCTC
GGGGGAAGGCGGCGGCGGCGGTACCGGCGGCGGCAGCCCGCCGCCGATTG
CCGGGTGCATCAGCAGCAACGGCAGCAGCAGCAACAGCATTGGGGCACCA
ACCTTATCGGCCACGACCCGCGACGCCCAGCAGCAGCAGCAGTCGCAGCA
GCAGCAGCAGCCGCAGCAGCAGGAGCTTAGCAGGTGCTCATCCCCAAACT
CCTTCATGAGGATGCCTGAACAAAACCCCCTCGACACCTACCCCAACGAC
ACCCACGTCGTGGGTAGCAGCAACCTCCTGCCCTACAACGTCTCCTGCGA
CATCAACAACCTTGACCCGCTGTCCAGCTTCCTAGCCAGCGGCCGTAGTG
ACAGCGATCCATTCGGGTTCGGCGTGGGCTCCGTCGCCGATGGCACGTTC
GGCGGCCGCAAGCCCACCCCCGAAGAGCTGCTGCTCTTCAGGAGCCACCG
ATTGCTCCAAGCAGAAGCAGTCGGTGTTGCAATCGGCGGCCCATCGATTG
CCACTTCAAGCAGCCCCAATGCAACTCATGTGCACAAGCGGTTCGGCCTT
GTGTCCGCCGCCCTCGCAAGACAGATTAGGATGAAGGTACTCGAGCAAAC
GAACGCGGCGGTGGATCGTGTTCGCGGGTTGGGTGCGGGTGCACTCCCGA
CACAGCAGGAAGACGTGATCGACGCCGAGAGAAGGAACTGTCACCGAATG
CTCGCGGGAATACTCGATGCGGCGACTTCTACGCTGAAGGAGATTGTCCC
GACCAGCTGCGGCGGTGGCTTGGGCGGGGTAGCAGGGAGCATGGTGGGCA
CGGTAGGGTCGGCGCTGCCGTCGTCGTTGCTCGGTTCTCCCGTGACTGAA
TCGCAACAGCTGGCGTCAACCTGGGAAGACGCCACAACTACCTCGAGCAT
GAACCTGCTCGACAACCACAACCACAACAACAGCAGCAGCAACAGCAGCA
GCAGCAGCAACATCCCCATAAGCTTGTCATTCCTAAACTCCATGCAACAA
CAGTCACAGTCACAGCAACAGCAACAGCAACAGCAGCAGCAGCAGCAGCA
GCAGCAGTCCATTCTGCACCACATGACCCCCGGCATGGGCCGCTCGAGCG
TGTTCGCCGTAACGCAAGTTCGGGACCGCAGCAGTAATGGTAACGGCAAT
GGCAACGGCAAAGGCAACGGCGGCGGCGGCAGCGGCGGTGCTCACTTTGG
TGGGGGAGGCATGTACCAAGAGGGGGTGGGCGCCAGCTTCAACTCTGGGG
GGGGGGTTGTGGTACCGACCGGGCACAACAGCAGCCATACAAGGCTTTTT
GGTTCTTCTCTCGATGCGGGGATCGGAAGCAGCCCTCCCGGACGGGGCAA
AGGGGGCACCGCAAAACGAACGACGTCCAACACCGTTAAGGGTAAGAAGA
AGTCCACGCTGTTGAGCAAGATGGGTTCCACCTCCCGGCAGACGTCGGCG
GCCAACAACCGCAAGGGCAGCCGCCACCGCCTCACCCCTCAGGCCAAGGA
AATTCTCGAGAGCTGGCTCGCCAAGCACTGGCTGAACCCTTACCCTACCG
AGGAAGAGAAGGTCACCCTGGCGCAGAGCTGCCGCATTACTGTCACCCAG
GTGAACAACTGGATGATGAACGTCCGCGTAAGGCGCTGCCGCACCAAAAA
GATCGGCCTTGCTACCGGCCCAGAGCAGATCACCTACCCGGAGTCGCAAT
CGTTTCCCAAGGCGCTGGCCGTGAACAGAACAGGCCGTAATGCTTCGAGC
AAC
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