mRNA_P-littoralis_Contig189.59.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: D7FJQ1_ECTSI (IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ1_ECTSI) HSP 1 Score: 359 bits (922), Expect = 2.820e-124 Identity = 182/213 (85.45%), Postives = 195/213 (91.55%), Query Frame = 1
Query: 1 MSRAGTISARPAAAASFQSGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTFHQT 639
MSRA TI + AA S QSGVRSMQTTH+TTLMLRAKVVVVGD+ VGKT+VVQMFKSGGHDYPKNYIMTIGVDFGVKQVK+PET+CVVELFLFDCPGQGVFNKLEQGAAYYENAAFVC+VFDVSNRDSFESCGRWLQGVRAALP APLPGV+IANK+DLREGGINARAVV TKEG+ FA QNGL+YFETSAA AK IDAPF HMA +FH+T
Sbjct: 1 MSRADTILSGSVAAPS-QSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATSFHET 212
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A6H5KZL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL0_9PHAE) HSP 1 Score: 299 bits (766), Expect = 1.170e-100 Identity = 153/175 (87.43%), Postives = 164/175 (93.71%), Query Frame = 1
Query: 1 MSRAGTISARPAAAASFQSGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTK 525
MSRA TI + AA S QSGVRSMQTTH+TTLMLRAKVVVVGD+ VGKT+VVQMFKSGGHDYPKNYIMTIGVDFGVKQVK+PET+CVVELFLFDCPGQGVFNKLEQGAAYYENAAFVC+VFDVSNRDSFESCGRWLQGVRAALP+ APLPGV+IANK+DLREGGINARAVV T+
Sbjct: 1 MSRADTILSGSVAAPS-QSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSKSAPLPGVVIANKSDLREGGINARAVVGTE 174
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A835ZCC9_9STRA (IFT27, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC9_9STRA) HSP 1 Score: 257 bits (657), Expect = 2.670e-84 Identity = 123/188 (65.43%), Postives = 152/188 (80.85%), Query Frame = 1
Query: 70 MQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTFH 633
M+ HK LMLR+KVV+VGD++VGKTA+ QM S GH+YPKNY+MT VDF VKQ+++PE NC VELFLFDC GQGVFNKL+ A +++NA+FVC+VFDV NR+SF+SCGRWLQGVRA P A AP+PGVLI +KADLREG +RAVV+ +EG FA++NGL YFE SAA + ++APFQHMA FH
Sbjct: 1 MEAQHKPLLMLRSKVVIVGDAYVGKTAITQMLISSGHNYPKNYLMTTDVDFSVKQIRLPEVNCCVELFLFDCAGQGVFNKLDLNAVHWDNASFVCVVFDVCNRESFQSCGRWLQGVRATRPTA-APMPGVLIGSKADLREG---SRAVVDAQEGARFAQENGLAYFEVSAAMSSGVEAPFQHMAQQFH 184
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A7S2XVJ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ0_9STRA) HSP 1 Score: 251 bits (642), Expect = 1.380e-81 Identity = 120/201 (59.70%), Postives = 157/201 (78.11%), Query Frame = 1
Query: 34 AAAASFQSGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTFHQ 636
AA F+S +RSM++ HK LMLR KVV+VGD+ VGK+A+VQMF GG YPKNY+MT GV F VKQV IP+TNC VEL+LFDC GQ +FN+ EQ +EN ++V +V+DV NRDSF+SC +WLQGVR+ +++ +PGVL+ANK+DLREGGIN+RA V+ +EG+ FA++N L +FETSAA AK++DAPF +A FHQ
Sbjct: 20 AAVTGFKSALRSMESAHKPLLMLRCKVVLVGDACVGKSALVQMFHGGGQRYPKNYVMTTGVGFCVKQVNIPDTNCAVELYLFDCAGQSIFNQREQNLKSWENTSYVVVVYDVGNRDSFQSCAKWLQGVRSTRQSSM--IPGVLVANKSDLREGGINSRAAVSDEEGRNFAQENSLEFFETSAAEAKNVDAPFNFIASQFHQ 218
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A7S3JRK5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRK5_9STRA) HSP 1 Score: 220 bits (561), Expect = 1.290e-69 Identity = 114/197 (57.87%), Postives = 145/197 (73.60%), Query Frame = 1
Query: 40 AASFQSGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTF 630
A +QS VRSM++ H++ LMLR KVVVVGD+ VGK+A++ MF SGG +PK Y+MT VDF VKQV IPE++ VEL+LFDC GQ +FN++E A+YENA+F+CLV+DVSN SFESCG+WLQ V + P+ LPGVLIANK DL GG R VV+T++GQ FA N L YFETSA + D PF+H+A+ F
Sbjct: 8 AVEYQSAVRSMESGHRSILMLRCKVVVVGDAAVGKSALISMFHSGGSSFPKQYLMTAWVDFRVKQVSIPESSTAVELYLFDCGGQSIFNQIEANNAHYENASFLCLVYDVSNASSFESCGKWLQMVSKSRPS----LPGVLIANKKDL--GGELGRRVVSTQKGQEFASANNLAYFETSALEG-EFDEPFRHIAIEF 197
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A7S3M1Q0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1Q0_9STRA) HSP 1 Score: 214 bits (545), Expect = 3.220e-67 Identity = 102/196 (52.04%), Postives = 145/196 (73.98%), Query Frame = 1
Query: 49 FQSGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTFHQ 636
QSG+RSM+T+HKT ++LR K+++VGD+ VGKTA+ Q F SGG YPKNY+MTIG +F VKQV IPETN +VELF++DC GQ +FN+L+ + YYENA+ V +V++V+NRDS SC +W+ GV+A + + PL G + NK + R+G I++RA V+ E + A+ G+ YFETSAA +DAPFQ++A F++
Sbjct: 1 MQSGLRSMETSHKTMVILRCKLILVGDACVGKTALTQSFVSGGTTYPKNYLMTIGAEFNVKQVTIPETNVIVELFIYDCAGQSIFNQLDLNSKYYENASAVMVVYNVANRDSLLSCNKWVSGVKAIQNSGV-PLVGAFVGNKCEFRDGSIDSRAEVDILEAKETAESLGMTYFETSAANNIGVDAPFQYIAEEFYR 195
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A067BYM3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BYM3_SAPPC) HSP 1 Score: 210 bits (534), Expect = 1.240e-65 Identity = 106/192 (55.21%), Postives = 138/192 (71.88%), Query Frame = 1
Query: 55 SGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTF 630
SG+RSM+TTH +T++LR K VVVGD+ +GKTA++Q KS GHDYPKNYIMT + VK + IPETN +VEL+L DCPGQ +FN+ E G+ ++E A + LVFDV++++SF+SC +W Q V A PA + GVLI NKAD +EG R ++TKE + FA+QN L YFE SA +IDAPF HMA TF
Sbjct: 2 SGLRSMETTHTSTVVLRCKAVVVGDAGIGKTALLQTLKSSGHDYPKNYIMTSSPELIVKSLPIPETNAIVELYLLDCPGQSIFNQREFGSMHFEGACMIVLVFDVNSKESFKSCIKWYQEV--ANPAPNHQISGVLIGNKADEKEGN---RDAISTKEAEDFAEQNNLKYFECSARLGTNIDAPFLHMATTF 188
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A024TXS0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TXS0_9STRA) HSP 1 Score: 209 bits (531), Expect = 3.530e-65 Identity = 105/197 (53.30%), Postives = 140/197 (71.07%), Query Frame = 1
Query: 55 SGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAP---LPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTFHQ 636
SG+RSM+TTHK+TL+LR KVVVVGD VGKTA++Q FKS GHDYPKNY+MT + VK V IP++N +VEL++ DCPGQ +FN+ E G+ ++E A+ + LVFDV++++SF+SC +W Q V + LAP LPGVL+ NK+D +EG R ++ KE + FA QN L YFE SA +DAPF H+A F Q
Sbjct: 2 SGLRSMETTHKSTLVLRCKVVVVGDGAVGKTALLQSFKSNGHDYPKNYVMTSNAELCVKSVPIPDSNVLVELYMHDCPGQSIFNQREFGSVHFEGASMILLVFDVNSKESFKSCTKWYQDV-----SKLAPNHNLPGVLVGNKSDNKEGN---RDAISQKEAEEFADQNNLKYFECSARLGTGVDAPFLHIAKAFKQ 190
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A0N7L680_PLAHL (Intraflagellar transport protein 27 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L680_PLAHL) HSP 1 Score: 207 bits (528), Expect = 9.140e-65 Identity = 100/194 (51.55%), Postives = 140/194 (72.16%), Query Frame = 1
Query: 55 SGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTFHQ 636
SG+RSM+TTHK+T +LR KV +VG++ VGKTAVVQ+ KS GH++PKNY+MT V+ K + IP+TN VVEL+LFDC GQ +FN+L+ G +Y+ A+ +VFDV+N++SF+SC +W Q VR A P +PGVL+ANK DLR N R ++TKE + FAK+N + +FE SA ++APF ++A FH+
Sbjct: 2 SGLRSMETTHKSTTVLRCKVAIVGEATVGKTAVVQILKSNGHEFPKNYVMTSDVELSTKSISIPDTNVVVELYLFDCAGQSIFNQLDFGTVHYKGASIALVVFDVNNKESFKSCSKWYQDVRDASPNH--NIPGVLLANKTDLR---YNNRDAISTKEAEEFAKRNDMKFFECSAQQNAGVEAPFVYIADWFHK 190
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A485KB43_9STRA (Aste57867_2355 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KB43_9STRA) HSP 1 Score: 206 bits (525), Expect = 3.060e-64 Identity = 105/194 (54.12%), Postives = 139/194 (71.65%), Query Frame = 1
Query: 55 SGVRSMQTTHKTT--LMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTF 630
SG+RSM+TTHK+T L+LR KV+VVGD VGKTA++Q FKS GHDYPKNYIMT + VK + I ETN +VEL++FDCPGQ +FN+ E G+ +++ A+ V +VFDV++++SF+SC +W Q V A PA LPGVL+ NK+D +EG R ++ KE + FA+QN L YFE SA +DAPFQ MA F
Sbjct: 2 SGLRSMETTHKSTVRLVLRCKVMVVGDGAVGKTALLQSFKSNGHDYPKNYIMTSNAELYVKPIPIAETNAIVELYMFDCPGQSIFNQREFGSVHFDGASMVMVVFDVNSKESFKSCTKWYQDV--ANPAPNHQLPGVLVGNKSDNKEGN---RDAISQKEAEDFAEQNNLKYFECSARLGTGVDAPFQFMAKAF 190 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig189.59.1 >prot_P-littoralis_Contig189.59.1 ID=prot_P-littoralis_Contig189.59.1|Name=mRNA_P-littoralis_Contig189.59.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=214bp MSRAGTISARPAAAASFQSGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAback to top mRNA from alignment at P-littoralis_Contig189:291082..292858+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig189.59.1 ID=mRNA_P-littoralis_Contig189.59.1|Name=mRNA_P-littoralis_Contig189.59.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1777bp|location=Sequence derived from alignment at P-littoralis_Contig189:291082..292858+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig189:291082..292858+ >mRNA_P-littoralis_Contig189.59.1 ID=mRNA_P-littoralis_Contig189.59.1|Name=mRNA_P-littoralis_Contig189.59.1|organism=Pylaiella littoralis U1_48|type=CDS|length=642bp|location=Sequence derived from alignment at P-littoralis_Contig189:291082..292858+ (Pylaiella littoralis U1_48)back to top |