mRNA_P-littoralis_Contig189.59.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig189.59.1
Unique NamemRNA_P-littoralis_Contig189.59.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: D7FJQ1_ECTSI (IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJQ1_ECTSI)

HSP 1 Score: 359 bits (922), Expect = 2.820e-124
Identity = 182/213 (85.45%), Postives = 195/213 (91.55%), Query Frame = 1
Query:    1 MSRAGTISARPAAAASFQSGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTFHQT 639
            MSRA TI +   AA S QSGVRSMQTTH+TTLMLRAKVVVVGD+ VGKT+VVQMFKSGGHDYPKNYIMTIGVDFGVKQVK+PET+CVVELFLFDCPGQGVFNKLEQGAAYYENAAFVC+VFDVSNRDSFESCGRWLQGVRAALP   APLPGV+IANK+DLREGGINARAVV TKEG+ FA QNGL+YFETSAA AK IDAPF HMA +FH+T
Sbjct:    1 MSRADTILSGSVAAPS-QSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPTTSAPLPGVVIANKSDLREGGINARAVVETKEGRLFALQNGLDYFETSAAGAKGIDAPFHHMATSFHET 212          
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A6H5KZL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZL0_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 1.170e-100
Identity = 153/175 (87.43%), Postives = 164/175 (93.71%), Query Frame = 1
Query:    1 MSRAGTISARPAAAASFQSGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTK 525
            MSRA TI +   AA S QSGVRSMQTTH+TTLMLRAKVVVVGD+ VGKT+VVQMFKSGGHDYPKNYIMTIGVDFGVKQVK+PET+CVVELFLFDCPGQGVFNKLEQGAAYYENAAFVC+VFDVSNRDSFESCGRWLQGVRAALP+  APLPGV+IANK+DLREGGINARAVV T+
Sbjct:    1 MSRADTILSGSVAAPS-QSGVRSMQTTHRTTLMLRAKVVVVGDACVGKTSVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKVPETDCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCVVFDVSNRDSFESCGRWLQGVRAALPSKSAPLPGVVIANKSDLREGGINARAVVGTE 174          
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A835ZCC9_9STRA (IFT27, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCC9_9STRA)

HSP 1 Score: 257 bits (657), Expect = 2.670e-84
Identity = 123/188 (65.43%), Postives = 152/188 (80.85%), Query Frame = 1
Query:   70 MQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTFH 633
            M+  HK  LMLR+KVV+VGD++VGKTA+ QM  S GH+YPKNY+MT  VDF VKQ+++PE NC VELFLFDC GQGVFNKL+  A +++NA+FVC+VFDV NR+SF+SCGRWLQGVRA  P A AP+PGVLI +KADLREG   +RAVV+ +EG  FA++NGL YFE SAA +  ++APFQHMA  FH
Sbjct:    1 MEAQHKPLLMLRSKVVIVGDAYVGKTAITQMLISSGHNYPKNYLMTTDVDFSVKQIRLPEVNCCVELFLFDCAGQGVFNKLDLNAVHWDNASFVCVVFDVCNRESFQSCGRWLQGVRATRPTA-APMPGVLIGSKADLREG---SRAVVDAQEGARFAQENGLAYFEVSAAMSSGVEAPFQHMAQQFH 184          
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A7S2XVJ0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ0_9STRA)

HSP 1 Score: 251 bits (642), Expect = 1.380e-81
Identity = 120/201 (59.70%), Postives = 157/201 (78.11%), Query Frame = 1
Query:   34 AAAASFQSGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTFHQ 636
            AA   F+S +RSM++ HK  LMLR KVV+VGD+ VGK+A+VQMF  GG  YPKNY+MT GV F VKQV IP+TNC VEL+LFDC GQ +FN+ EQ    +EN ++V +V+DV NRDSF+SC +WLQGVR+   +++  +PGVL+ANK+DLREGGIN+RA V+ +EG+ FA++N L +FETSAA AK++DAPF  +A  FHQ
Sbjct:   20 AAVTGFKSALRSMESAHKPLLMLRCKVVLVGDACVGKSALVQMFHGGGQRYPKNYVMTTGVGFCVKQVNIPDTNCAVELYLFDCAGQSIFNQREQNLKSWENTSYVVVVYDVGNRDSFQSCAKWLQGVRSTRQSSM--IPGVLVANKSDLREGGINSRAAVSDEEGRNFAQENSLEFFETSAAEAKNVDAPFNFIASQFHQ 218          
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A7S3JRK5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JRK5_9STRA)

HSP 1 Score: 220 bits (561), Expect = 1.290e-69
Identity = 114/197 (57.87%), Postives = 145/197 (73.60%), Query Frame = 1
Query:   40 AASFQSGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTF 630
            A  +QS VRSM++ H++ LMLR KVVVVGD+ VGK+A++ MF SGG  +PK Y+MT  VDF VKQV IPE++  VEL+LFDC GQ +FN++E   A+YENA+F+CLV+DVSN  SFESCG+WLQ V  + P+    LPGVLIANK DL  GG   R VV+T++GQ FA  N L YFETSA    + D PF+H+A+ F
Sbjct:    8 AVEYQSAVRSMESGHRSILMLRCKVVVVGDAAVGKSALISMFHSGGSSFPKQYLMTAWVDFRVKQVSIPESSTAVELYLFDCGGQSIFNQIEANNAHYENASFLCLVYDVSNASSFESCGKWLQMVSKSRPS----LPGVLIANKKDL--GGELGRRVVSTQKGQEFASANNLAYFETSALEG-EFDEPFRHIAIEF 197          
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A7S3M1Q0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M1Q0_9STRA)

HSP 1 Score: 214 bits (545), Expect = 3.220e-67
Identity = 102/196 (52.04%), Postives = 145/196 (73.98%), Query Frame = 1
Query:   49 FQSGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTFHQ 636
             QSG+RSM+T+HKT ++LR K+++VGD+ VGKTA+ Q F SGG  YPKNY+MTIG +F VKQV IPETN +VELF++DC GQ +FN+L+  + YYENA+ V +V++V+NRDS  SC +W+ GV+A   + + PL G  + NK + R+G I++RA V+  E +  A+  G+ YFETSAA    +DAPFQ++A  F++
Sbjct:    1 MQSGLRSMETSHKTMVILRCKLILVGDACVGKTALTQSFVSGGTTYPKNYLMTIGAEFNVKQVTIPETNVIVELFIYDCAGQSIFNQLDLNSKYYENASAVMVVYNVANRDSLLSCNKWVSGVKAIQNSGV-PLVGAFVGNKCEFRDGSIDSRAEVDILEAKETAESLGMTYFETSAANNIGVDAPFQYIAEEFYR 195          
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A067BYM3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BYM3_SAPPC)

HSP 1 Score: 210 bits (534), Expect = 1.240e-65
Identity = 106/192 (55.21%), Postives = 138/192 (71.88%), Query Frame = 1
Query:   55 SGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTF 630
            SG+RSM+TTH +T++LR K VVVGD+ +GKTA++Q  KS GHDYPKNYIMT   +  VK + IPETN +VEL+L DCPGQ +FN+ E G+ ++E A  + LVFDV++++SF+SC +W Q V  A PA    + GVLI NKAD +EG    R  ++TKE + FA+QN L YFE SA    +IDAPF HMA TF
Sbjct:    2 SGLRSMETTHTSTVVLRCKAVVVGDAGIGKTALLQTLKSSGHDYPKNYIMTSSPELIVKSLPIPETNAIVELYLLDCPGQSIFNQREFGSMHFEGACMIVLVFDVNSKESFKSCIKWYQEV--ANPAPNHQISGVLIGNKADEKEGN---RDAISTKEAEDFAEQNNLKYFECSARLGTNIDAPFLHMATTF 188          
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A024TXS0_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024TXS0_9STRA)

HSP 1 Score: 209 bits (531), Expect = 3.530e-65
Identity = 105/197 (53.30%), Postives = 140/197 (71.07%), Query Frame = 1
Query:   55 SGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAP---LPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTFHQ 636
            SG+RSM+TTHK+TL+LR KVVVVGD  VGKTA++Q FKS GHDYPKNY+MT   +  VK V IP++N +VEL++ DCPGQ +FN+ E G+ ++E A+ + LVFDV++++SF+SC +W Q V     + LAP   LPGVL+ NK+D +EG    R  ++ KE + FA QN L YFE SA     +DAPF H+A  F Q
Sbjct:    2 SGLRSMETTHKSTLVLRCKVVVVGDGAVGKTALLQSFKSNGHDYPKNYVMTSNAELCVKSVPIPDSNVLVELYMHDCPGQSIFNQREFGSVHFEGASMILLVFDVNSKESFKSCTKWYQDV-----SKLAPNHNLPGVLVGNKSDNKEGN---RDAISQKEAEEFADQNNLKYFECSARLGTGVDAPFLHIAKAFKQ 190          
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A0N7L680_PLAHL (Intraflagellar transport protein 27 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L680_PLAHL)

HSP 1 Score: 207 bits (528), Expect = 9.140e-65
Identity = 100/194 (51.55%), Postives = 140/194 (72.16%), Query Frame = 1
Query:   55 SGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTFHQ 636
            SG+RSM+TTHK+T +LR KV +VG++ VGKTAVVQ+ KS GH++PKNY+MT  V+   K + IP+TN VVEL+LFDC GQ +FN+L+ G  +Y+ A+   +VFDV+N++SF+SC +W Q VR A P     +PGVL+ANK DLR    N R  ++TKE + FAK+N + +FE SA     ++APF ++A  FH+
Sbjct:    2 SGLRSMETTHKSTTVLRCKVAIVGEATVGKTAVVQILKSNGHEFPKNYVMTSDVELSTKSISIPDTNVVVELYLFDCAGQSIFNQLDFGTVHYKGASIALVVFDVNNKESFKSCSKWYQDVRDASPNH--NIPGVLLANKTDLR---YNNRDAISTKEAEEFAKRNDMKFFECSAQQNAGVEAPFVYIADWFHK 190          
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Match: A0A485KB43_9STRA (Aste57867_2355 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KB43_9STRA)

HSP 1 Score: 206 bits (525), Expect = 3.060e-64
Identity = 105/194 (54.12%), Postives = 139/194 (71.65%), Query Frame = 1
Query:   55 SGVRSMQTTHKTT--LMLRAKVVVVGDSWVGKTAVVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGVFNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPLPGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDIDAPFQHMALTF 630
            SG+RSM+TTHK+T  L+LR KV+VVGD  VGKTA++Q FKS GHDYPKNYIMT   +  VK + I ETN +VEL++FDCPGQ +FN+ E G+ +++ A+ V +VFDV++++SF+SC +W Q V  A PA    LPGVL+ NK+D +EG    R  ++ KE + FA+QN L YFE SA     +DAPFQ MA  F
Sbjct:    2 SGLRSMETTHKSTVRLVLRCKVMVVGDGAVGKTALLQSFKSNGHDYPKNYIMTSNAELYVKPIPIAETNAIVELYMFDCPGQSIFNQREFGSVHFDGASMVMVVFDVNSKESFKSCTKWYQDV--ANPAPNHQLPGVLVGNKSDNKEGN---RDAISQKEAEDFAEQNNLKYFECSARLGTGVDAPFQFMAKAF 190          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig189.59.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJQ1_ECTSI2.820e-12485.45IFT27, Ras superfamily GTPase n=1 Tax=Ectocarpus s... [more]
A0A6H5KZL0_9PHAE1.170e-10087.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZCC9_9STRA2.670e-8465.43IFT27, ras superfamily GTPase n=1 Tax=Tribonema mi... [more]
A0A7S2XVJ0_9STRA1.380e-8159.70Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3JRK5_9STRA1.290e-6957.87Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3M1Q0_9STRA3.220e-6752.04Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A067BYM3_SAPPC1.240e-6555.21Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A024TXS0_9STRA3.530e-6553.30Uncharacterized protein n=2 Tax=Aphanomyces TaxID=... [more]
A0A0N7L680_PLAHL9.140e-6551.55Intraflagellar transport protein 27 homolog n=1 Ta... [more]
A0A485KB43_9STRA3.060e-6454.12Aste57867_2355 protein n=1 Tax=Aphanomyces stellat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig189contigP-littoralis_Contig189:291082..292858 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FJQ1
Preferred nameIFT27
PFAMsRas
Model size642
Max annot lvl2759|Eukaryota
KEGG koko:K07934
Hectar predicted targeting categorymitochondrion
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005813,GO:0005815,GO:0005856,GO:0005929,GO:0006810,GO:0006886,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007264,GO:0007275,GO:0007399,GO:0007423,GO:0008104,GO:0008150,GO:0009987,GO:0010970,GO:0012505,GO:0015031,GO:0015630,GO:0015833,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022008,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030705,GO:0030990,GO:0030992,GO:0031175,GO:0031344,GO:0031410,GO:0031503,GO:0031514,GO:0031982,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0033043,GO:0034613,GO:0035556,GO:0035639,GO:0035720,GO:0035721,GO:0035735,GO:0036094,GO:0036126,GO:0042073,GO:0042490,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043583,GO:0044085,GO:0044087,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0045184,GO:0046907,GO:0048468,GO:0048513,GO:0048666,GO:0048699,GO:0048731,GO:0048839,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0060113,GO:0060119,GO:0060122,GO:0060271,GO:0060491,GO:0065007,GO:0070727,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0090102,GO:0097159,GO:0097223,GO:0097225,GO:0097228,GO:0097367,GO:0097542,GO:0097708,GO:0097729,GO:0099111,GO:0120025,GO:0120031,GO:0120032,GO:0120035,GO:0120036,GO:0120038,GO:1901265,GO:1901363,GO:1902017,GO:1902115
Exons4
Evalue4.62e-125
EggNOG OGsKOG0079@1|root,KOG0079@2759|Eukaryota
Ec32 ortholog descriptionIFT27, Ras superfamily GTPase
Ec32 orthologEc-06_010640.1
DescriptionGTPase activity
Cds size642
COG categoryS
BRITEko00000,ko03036,ko04031
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789903.6899648-CDS-P-littoralis_Contig189:291081..2912851680789903.6899648-CDS-P-littoralis_Contig189:291081..291285Pylaiella littoralis U1_48CDSP-littoralis_Contig189 291082..291285 +
1680789903.710025-CDS-P-littoralis_Contig189:291765..2918791680789903.710025-CDS-P-littoralis_Contig189:291765..291879Pylaiella littoralis U1_48CDSP-littoralis_Contig189 291766..291879 +
1680789903.72106-CDS-P-littoralis_Contig189:292157..2923641680789903.72106-CDS-P-littoralis_Contig189:292157..292364Pylaiella littoralis U1_48CDSP-littoralis_Contig189 292158..292364 +
1680789903.7301679-CDS-P-littoralis_Contig189:292741..2928581680789903.7301679-CDS-P-littoralis_Contig189:292741..292858Pylaiella littoralis U1_48CDSP-littoralis_Contig189 292742..292858 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig189.59.1prot_P-littoralis_Contig189.59.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig189 291082..292858 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig189.59.1

>prot_P-littoralis_Contig189.59.1 ID=prot_P-littoralis_Contig189.59.1|Name=mRNA_P-littoralis_Contig189.59.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=214bp
MSRAGTISARPAAAASFQSGVRSMQTTHKTTLMLRAKVVVVGDSWVGKTA
VVQMFKSGGHDYPKNYIMTIGVDFGVKQVKIPETNCVVELFLFDCPGQGV
FNKLEQGAAYYENAAFVCLVFDVSNRDSFESCGRWLQGVRAALPAALAPL
PGVLIANKADLREGGINARAVVNTKEGQTFAKQNGLNYFETSAAAAKDID
APFQHMALTFHQT*
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mRNA from alignment at P-littoralis_Contig189:291082..292858+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig189.59.1 ID=mRNA_P-littoralis_Contig189.59.1|Name=mRNA_P-littoralis_Contig189.59.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1777bp|location=Sequence derived from alignment at P-littoralis_Contig189:291082..292858+ (Pylaiella littoralis U1_48)
ATGTCGCGGGCTGGGACAATTTCGGCGAGGCCTGCTGCTGCTGCATCGTT CCAGAGCGGGGTCCGAAGCATGCAAACAACTCACAAAACGACGCTCATGC TCCGGGCGAAGGTCGTCGTCGTGGGAGATTCGTGGGTGGGGAAAACGGCG GTGGTTCAGATGTTCAAGAGTGGCGGTCACGACTACCCTAAGAACTACAT CATGGTAAGAGAAAGCATGCCTCGCGGCTGCATCAGCATTTGTTCTTCTT CTGTTCCTACGTTGGTCAAGTCGGTTCTTCTGCAGTATCATACGGTAGTT CGCATGCTGTAATCATGAGAAAGTATGGCTCTAGAGGGCTGCGTGCAAGT CCGACAGCGGTGCATACCCCGGTATCAACGAACGGGCGCGGTTGTCGATG CTCGAAAATCAGGAACTACGTACGATAGAAAAGAGCGTCGTTATCTCGGT TGGATATGACCTCCCCGGGAACTGTGTCACAGTAATTCAGCATCAGGCGT TGCCTCGCTTGCTAGTTTTTGCTGCACACTCAAGCCCAGCTCAGCCCATC ATATGATACGACGCTACTGCTTTTGAATTTTGGAGGCGGAAATACGAAAT CGGACCATAAACTCCCTCGCCCTCCCTCTAATGTCACACTTGTACGGTGG ATCGGCTGCGATGTAAAATGCCGCACCCCGTAAGACTATCGGGGTAGACT TTGGAGTGAAGCAGGTCAAGATCCCCGAGACAAACTGCGTAGTGGAGCTG TTCCTGTTCGACTGCCCAGGACAAGGCGTCTTCAACAAGCTCGAACAGGT GAATGAGGCCGTAAAGACTGGTCAAGCTCGTATCGGGTTACTTGTTCGTC ATCGTCCCACTCGTGTGTGCTGTCGCCCACCTTAATACCCATATCCGAGC GGTATCCTGCAAATGCACAGTACAGATCAAAGCGTGATCCCTGCAAAATA CACCAGTTGCTGCTAATACGGGCAGACAATCGAGTACAACAGATGATGCG CCTACATAACAAATGATGCAACCTCCGCCTGATTGAGTTGTTTCGTGTCG GTCATGTGTCGTCGCCACCTACACAGGGCGCGGCCTATTACGAGAACGCA GCTTTCGTGTGTTTGGTCTTCGATGTGAGCAACAGGGATTCTTTTGAGAG CTGTGGGCGATGGCTGCAGGGAGTACGAGCGGCCCTGCCTGCCGCGTTGG CACCCCTCCCGGGGGTTTTGATTGCGAACAAGGCAGATCTGAGGGAAGGG GGCATCAATGCTAGGGCTGTCGTTAATACAAAGGTAACTTTAAATACCAA ATTACTGTGCACAACGGGGTAAGCCACACCCCCTAGATCATTTTTGTAAG CTCAACTTACCGTTGGCAAGAAGTGTGTTGTTGCCGAAAGGGGTGGCACT AGGCAGATCGCTTCGAGAGCTTTCTGGAATAGACTCGTTTGGCATTGGCA CCATCTTCATCGGTGAGGAATATGAAAACCAACCCATGAAGTATGGTGCA CCCTTTCGAATTCTAAGAGAGCAACTTCCCACGCACACATGACACACATG CGTGTATTCCCTGGCGCTATTGATCAAACATCCAGCTGTTCCCTCCTCGT GGTTGATTTGTGCCTTCGGCACGATGTCTGCGGCATGCTTGTCTTTCCGC GTATATGCAGGAAGGGCAAACATTTGCAAAGCAGAACGGCCTCAACTACT TTGAGACATCCGCAGCAGCGGCGAAAGACATCGACGCGCCGTTTCAACAC ATGGCCTTGACTTTCCATCAAACGTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig189:291082..292858+

>mRNA_P-littoralis_Contig189.59.1 ID=mRNA_P-littoralis_Contig189.59.1|Name=mRNA_P-littoralis_Contig189.59.1|organism=Pylaiella littoralis U1_48|type=CDS|length=642bp|location=Sequence derived from alignment at P-littoralis_Contig189:291082..292858+ (Pylaiella littoralis U1_48)
ATGTCGCGGGCTGGGACAATTTCGGCGAGGCCTGCTGCTGCTGCATCGTT
CCAGAGCGGGGTCCGAAGCATGCAAACAACTCACAAAACGACGCTCATGC
TCCGGGCGAAGGTCGTCGTCGTGGGAGATTCGTGGGTGGGGAAAACGGCG
GTGGTTCAGATGTTCAAGAGTGGCGGTCACGACTACCCTAAGAACTACAT
CATGACTATCGGGGTAGACTTTGGAGTGAAGCAGGTCAAGATCCCCGAGA
CAAACTGCGTAGTGGAGCTGTTCCTGTTCGACTGCCCAGGACAAGGCGTC
TTCAACAAGCTCGAACAGGGCGCGGCCTATTACGAGAACGCAGCTTTCGT
GTGTTTGGTCTTCGATGTGAGCAACAGGGATTCTTTTGAGAGCTGTGGGC
GATGGCTGCAGGGAGTACGAGCGGCCCTGCCTGCCGCGTTGGCACCCCTC
CCGGGGGTTTTGATTGCGAACAAGGCAGATCTGAGGGAAGGGGGCATCAA
TGCTAGGGCTGTCGTTAATACAAAGGAAGGGCAAACATTTGCAAAGCAGA
ACGGCCTCAACTACTTTGAGACATCCGCAGCAGCGGCGAAAGACATCGAC
GCGCCGTTTCAACACATGGCCTTGACTTTCCATCAAACGTGA
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