mRNA_P-littoralis_Contig188.62.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig188.62.1 vs. uniprot
Match: D8LRX5_ECTSI (LigB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRX5_ECTSI) HSP 1 Score: 413 bits (1062), Expect = 7.280e-138 Identity = 198/265 (74.72%), Postives = 216/265 (81.51%), Query Frame = 3
Query: 120 MKQIDSTCAAAQWYRTFTKKWSKPAAIIAVSAHWEERGAVKVTTGAKHPLLFDYYGFPDYTYDLEYAPPGEPALASRIIDVLRAGGLKAKGDNDRGFDHGVFIPLKLMYPEADVPVVQVSLLAGLDSEVHLRIGAALGTLALEEDVLIVCSGQATHNSHSSYPSYPPGKGAPREKAFVDWLKETAASSTVTPDERRRRLREWETDAPHSRNAHPREEHLLPLHVAAGCAGFQRGEVIFDDFAMGGMSLACVGFWSSGSSSSISSG 914
MKQID+T AAAQWYRTFTKKW+KP+AI+ VSAHWE RGAVKVTTG KHPL FDYYGFPDY YDLEYAPPG P LA RII++L A G A+GD+ RG+DHG FIPLKLMYP+ADVPVVQVSLL GLD E HL++G L L E DVLIV SGQATH S + YPPGKGAP+E+AFVDWLKETAAS VTP+ER+RRLREWE DAPH RNAHPREEHLLPLHVAAGC GFQ G +IFDDFAMG MSLACVGFW G G
Sbjct: 1 MKQIDATSAAAQWYRTFTKKWAKPSAIVVVSAHWEGRGAVKVTTGEKHPLFFDYYGFPDYCYDLEYAPPGHPELARRIIELLEADGFNARGDDSRGYDHGTFIPLKLMYPDADVPVVQVSLLGGLDPEKHLKMGKTLKKLVDERDVLIVGSGQATHGRGSDHRPYPPGKGAPKEEAFVDWLKETAASPAVTPEERQRRLREWERDAPHGRNAHPREEHLLPLHVAAGCTGFQPGSIIFDDFAMGHMSLACVGFWPGGGEGEAKGG 265
BLAST of mRNA_P-littoralis_Contig188.62.1 vs. uniprot
Match: A0A836CEX8_9STRA (Catalytic LigB subunit of aromatic ring-opening dioxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX8_9STRA) HSP 1 Score: 243 bits (621), Expect = 7.920e-72 Identity = 134/279 (48.03%), Postives = 171/279 (61.29%), Query Frame = 3
Query: 54 PTSLFLSHGGGPGFLMKEGSGMMKQIDSTCAAAQWYRTFTKKWSKPAAIIAVSAHWEERGAVKVTTGAKHP-LLFDYYGFPDYTYDLEYAPPGEPALASRIIDVLRAGGLKAKGDNDRGFDHGVFIPLKLMYPEADVPVVQVSLLAGLDSEVHLRIGAALGTLALEEDVLIVCSGQATHNSHSSYPSYPPGKGAP---REKAFVDWLKETAASSTVTPDERRRRLREWETDAPHSRNAHPREEHLLPLHVAAGCAGFQRGEVIFDDFAMGGMSLACVGF 878
P S+F+SHGGGP F E +G ID A +R + KP I+ +AHWE G TG P L++DYYGFP TY L Y PG+P LA+ I+ +L+ G+ A+ + +RGFDHGVFIPLK++YP+ADVPVV +SL + LD H+ +G AL LA VL+ SG ATHN + G+G P R AF+DWLK T V+ ER RRL W +APH+R++HPREEHLLPLHVAAG AGF GE++ D GGMS+A F
Sbjct: 12 PRSVFISHGGGPCFFY-EAAGPFSAIDKNSRVAADFRKLSTVLPKPKVIVICTAHWEADGPKIRVTGQPAPSLVYDYYGFPAETYKLTYPAPGDPQLAADIVALLKGAGISAELELERGFDHGVFIPLKMIYPDADVPVVAISLSSTLDPAFHISVGKALSGLA-GRGVLVFGSGMATHNLGMVRSAAAHGEGVPVEPRAGAFIDWLKATLGDG-VSAQERERRLLRWTEEAPHARHSHPREEHLLPLHVAAGAAGFAAGELVLDATVFGGMSMASFAF 287
BLAST of mRNA_P-littoralis_Contig188.62.1 vs. uniprot
Match: A0A496XGL0_9GAMM (Dioxygenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496XGL0_9GAMM) HSP 1 Score: 216 bits (550), Expect = 7.650e-62 Identity = 122/268 (45.52%), Postives = 164/268 (61.19%), Query Frame = 3
Query: 63 LFLSHGGGPGFLMKEGSGMMKQIDSTCAAAQWYRTFTKKWSKPAAIIAVSAHWEERGAVKVTTGAKHPLLFDYYGFPDYTYDLEYAPPGEPALASRIIDVLRAGGLKAKGDNDRGFDHGVFIPLKLMYPEADVPVVQVSLLAGLDSEVHLRIGAALGTLALEEDVLIVCSGQATHNSHSSYPSYPPGKGAPREKAFVDWLKETAASSTVTPDERRRRLREWETDAPHSRNAHPREEHLLPLHVAAGCAGFQRGEVIFDDFAMGGMSLA 866
LF+ HGGGP L+ + +G +D A T +P+AI+ +SAHWEE G +T+G L++DYYGFPD YD+EY G+P LA RI +L G++A+ D+ RGFDHG+F+PLKLMYP A +P VQ+SL+ LD + H+ IG AL L +E+VLIV SG + HN ++ S G + +AF DWL T ++ + P ER RRL EW DAP +R HPREEHLLPLHV G + V FDD +G ++ A
Sbjct: 5 LFIPHGGGPLPLLGD-AGHQVMVDFLGA-------ITANLGQPSAILVISAHWEE-GVATITSGKSPSLIYDYYGFPDEAYDVEYPAAGDPILAERIFGLLEKAGIEARMDDHRGFDHGLFVPLKLMYPAASIPCVQLSLINNLDPQTHINIGKALSDLR-KENVLIVGSGLSFHNM-DAFLSKSDGVMDAKNRAFEDWLAHTCTNNNIPPPERERRLIEW-ADAPAARYCHPREEHLLPLHVCYGLSNSVAARV-FDDKVLGMLASA 259
BLAST of mRNA_P-littoralis_Contig188.62.1 vs. uniprot
Match: A0A2T6NDR8_9GAMM (Dioxygenase n=1 Tax=gamma proteobacterium symbiont of Ctena orbiculata TaxID=1968598 RepID=A0A2T6NDR8_9GAMM) HSP 1 Score: 214 bits (545), Expect = 4.470e-61 Identity = 122/251 (48.61%), Postives = 162/251 (64.54%), Query Frame = 3
Query: 63 LFLSHGGGPGFLM-KEGSGMMKQIDSTCAAAQWYRTFTKKWSKPAAIIAVSAHWEERGAVKVTTGAKHPLLFDYYGFPDYTYDLEYAPPGEPALASRIIDVLRAGGLKAKGDNDRGFDHGVFIPLKLMYPEADVPVVQVSLLAGLDSEVHLRIGAALGTLALEEDVLIVCSGQATHNSHSSYPSYPPGKGAPRE--KAFVDWLKETAASSTVTPDERRRRLREWETDAPHSRNAHPREEHLLPLHVAAGCA 806
+FLSHGGGP L+ EG M A A KP+AII VSAHWEE A +T G K PL++DYYGFP +Y +EY PGEP+LA RI +LR G++A+ D+ RGFDHG+F+PLK+MYPEADVP VQ+SL+ LDS H+RIG ALG L ++++LI+ SG + HN + + P R+ ++F WL +T ++ + DER +RL W+ +APH+R HPREEHLLPLH+ G A
Sbjct: 8 IFLSHGGGPMPLLGDEGHREMVACLREMAGAM---------DKPSAIIVVSAHWEEAVAT-ITAGEKPPLVYDYYGFPQESYSIEYPCPGEPSLAGRIQGMLRKAGMEAELDDQRGFDHGLFVPLKIMYPEADVPCVQLSLVNSLDSSHHIRIGQALGQLK-DDNLLIIGSGFSFHNMRAFFA---PDSAESRKMNESFEAWLIDTCSNDALQEDERIQRLNNWQ-NAPHARYCHPREEHLLPLHLCYGIA 243
BLAST of mRNA_P-littoralis_Contig188.62.1 vs. uniprot
Match: A0A3B9P8V8_9CHLR (Dioxygenase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A3B9P8V8_9CHLR) HSP 1 Score: 213 bits (543), Expect = 8.990e-61 Identity = 122/264 (46.21%), Postives = 163/264 (61.74%), Query Frame = 3
Query: 63 LFLSHGGGPGFLMKEGSGMMKQIDSTCAAAQWYRTFTKKWSKPAAIIAVSAHWEERGAVKVTTGAKHPLLF-DYYGFPDYTYDLEYAPPGEPALASRIIDVLRAGGLKAKGDNDRGFDHGVFIPLKLMYPEADVPVVQVSLLAGLDSEVHLRIGAALGTLALEEDVLIVCSGQATHNSHSSYPSYPPGKGAPREKAFVDWLKETAASSTVTPDERRRRLREWETDAPHSRNAHPREEHLLPLHVAAGCAGFQRGEVIFDDFAMG 851
++ SHGGGP L+ + A + R ++ KP AI+ +SAHWEE V GA +P +F DYYGFP+ Y++ Y PG P+LA+ I + L G+ +K + RGFDHG+FIPL +MYPEAD+P +Q+SL GL H+ +G AL +L E++L++ SG + HN SS+ + P PR AF DWL ET S + +ER RL WE+ APH+R HPREEHLLPLHV AG AG +RG+VIFDD MG
Sbjct: 10 VYFSHGGGPLPLLGDPGHQ--------AMVNFMRQLPEQLPKPEAILVISAHWEE--PVPTLLGAANPPMFYDYYGFPELAYEINYPAPGHPSLAAHIAETLENTGITSKINKTRGFDHGLFIPLSMMYPEADIPALQLSLRQGLSPAFHITLGKALQSLR-NENLLVIGSGFSFHNI-SSFFHHDPDMVNPRNNAFQDWLIETITSD-IDQEERESRLAAWES-APHARYCHPREEHLLPLHVCAGLAG-RRGQVIFDDLIMG 258
BLAST of mRNA_P-littoralis_Contig188.62.1 vs. uniprot
Match: A0A1J4QGR4_9GAMM (Dioxygenase n=1 Tax=Oceanisphaera psychrotolerans TaxID=1414654 RepID=A0A1J4QGR4_9GAMM) HSP 1 Score: 213 bits (543), Expect = 1.050e-60 Identity = 118/250 (47.20%), Postives = 162/250 (64.80%), Query Frame = 3
Query: 63 LFLSHGGGPGFLMKEGSGMMKQIDSTCAAAQWYRTFTKKWSKPAAIIAVSAHWEERGAVKVTTGAKHPLLFDYYGFPDYTYDLEYAPPGEPALASRIIDVLRAGGLKAKGDNDRGFDHGVFIPLKLMYPEADVPVVQVSLLAGLDSEVHLRIGAALGTLALEEDVLIVCSGQATHNSHSSY-PSYPPGKGAPREKAFVDWLKETAASSTVTPDERRRRLREWETDAPHSRNAHPREEHLLPLHVAAGCAG 809
LF+SHGGGP L+ G +++ QW + + +P AI+ VSAHWE +T GA+ L++DYYGFP +Y+++Y PGEPALA ++ L A G+ A+ D +RGFDHGVF+PLKLMYPEAD+P VQ+SL++ LD+E HL IG AL L + ++L++ SG + HN + + P P K R +AF WL++T + + ERRRRL W++ APH+R HPREEHLLPLHV G AG
Sbjct: 8 LFISHGGGPLPLL--GDPDHREM------VQWLQDMAGRLRRPEAILIVSAHWEA-AVPTITAGARPGLIYDYYGFPPESYEIQYPCPGEPALAQQVQQALMAAGMPARLDAERGFDHGVFVPLKLMYPEADIPCVQLSLVSSLDAEQHLNIGRALQALDYD-NLLVIGSGFSFHNMQAFFTPGTPEIKA--RNQAFEAWLEDTCGNPRLEEAERRRRLIHWDS-APHARFCHPREEHLLPLHVCYGLAG 244
BLAST of mRNA_P-littoralis_Contig188.62.1 vs. uniprot
Match: I7ZAX2_9GAMM (Catalytic LigB subunit of aromatic ring-opening dioxygenase n=1 Tax=Hydrocarboniphaga effusa AP103 TaxID=1172194 RepID=I7ZAX2_9GAMM) HSP 1 Score: 213 bits (542), Expect = 1.260e-60 Identity = 128/280 (45.71%), Postives = 166/280 (59.29%), Query Frame = 3
Query: 42 EHPRPTSLFLSHGGGPGFLMKEGSGMMKQIDSTCAAAQWYRTFTKK-WSKPAAIIAVSAHWEERGAVKVTTGAKHPLLFDYYGFPDYTYDLEYAPPGEPALASRIIDVLRAGGLKAKGDNDRGFDHGVFIPLKLMYPEADVPVVQVSLLAGLDSEVHLRIGAALGTLALEEDVLIVCSGQATHNSHSSYPSYPPGKGAPREKAFVDWLKETAASSTVTPDERRRRLREWETDAPHSRNAHPREEHLLPLHVAAGCAGFQRGEVIFDDFAMGGMSLACVGF 878
E R +LF++HGGGP F M+ D+ + W R + + KP A++ VSAHWE VT + L++DYYGFP +TY+L+Y PG+PALA I+ L GL A+ D +RGFDHGVF+PLKL+YP+AD+PVVQ+SL AGL+ HL +GAAL L E+ VLI+ SG + HN G G F WL E T P+ R+ RLR+WE AP +R AHPREEHLLPL VAAG AG G+ +F + G +A GF
Sbjct: 3 EASRLPTLFIAHGGGPCFFME-----WNPPDTWRSLEAWLRGLSVEVGDKPRALLVVSAHWEAE-RYSVTAHPQPSLIYDYYGFPQHTYELQYPAPGDPALAEEIVRRLGVAGLPAEIDRERGFDHGVFVPLKLIYPQADIPVVQLSLRAGLNPAEHLAVGAALAPLR-EQGVLIIGSGYSYHNMRGYG-----GAGQRPSIEFDRWLNEAL---TADPETRKERLRDWER-APSARAAHPREEHLLPLMVAAGAAGQDIGKRLFGELVFG---VATSGF 263
BLAST of mRNA_P-littoralis_Contig188.62.1 vs. uniprot
Match: A0A845FS38_9GAMM (Dioxygenase n=1 Tax=Pseudomaricurvus sp. HS19 TaxID=2692626 RepID=A0A845FS38_9GAMM) HSP 1 Score: 213 bits (542), Expect = 1.260e-60 Identity = 121/251 (48.21%), Postives = 160/251 (63.75%), Query Frame = 3
Query: 54 PTSLFLSHGGGPGFLMKEGSGMMKQIDSTCAAAQWYRTFTKKWSKPAAIIAVSAHWEERGAVKVTTGAKHPLLFDYYGFPDYTYDLEYAPPGEPALASRIIDVLRAGGLKAKGDNDRGFDHGVFIPLKLMYPEADVPVVQVSLLAGLDSEVHLRIGAALGTLALEEDVLIVCSGQATHNSHSSYPSYPPGKGAPREKAFVDWLKETAASSTVTPDERRRRLREWETDAPHSRNAHPREEHLLPLHVAAGCA 806
PT LFLSHGGGP L+ + S + + TC A KP+AI+ +SAHWE R A VT+GA L++DYY FP+ +Y ++Y PGEPALA+ + L G+ D RGFDHG+F+PLK+MYP+A++P VQ+SL LD E+HL IG AL TLA +E+VL++ SG + HN + + P A R +AF DWL T +T+ ERR+RL +WE DAP +R HPREEHLLPLH+ G A
Sbjct: 4 PTILFLSHGGGPMPLLGDPS-HAEMV--TCLQA-----IAADIPKPSAIVVISAHWETR-APCVTSGATPELIYDYYNFPEESYSIQYPCPGEPALATAVQQALTEQGIPCDADARRGFDHGLFVPLKIMYPQANIPCVQLSLSNSLDPELHLGIGEALQTLA-QENVLVIGSGFSFHNMKAFFAGNDPDVVA-RNQAFEDWLHSTCTDTTLDEGERRQRLHDWE-DAPQARFCHPREEHLLPLHICYGLA 242
BLAST of mRNA_P-littoralis_Contig188.62.1 vs. uniprot
Match: A0A0L0DII2_THETB (Extradiol ring-cleavage dioxygenase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DII2_THETB) HSP 1 Score: 213 bits (543), Expect = 1.650e-60 Identity = 127/268 (47.39%), Postives = 164/268 (61.19%), Query Frame = 3
Query: 63 LFLSHGGGPGFLMKEGSGMMKQIDSTCAAAQWYRTFTKKW------SKPAAIIAVSAHWEER----GAVKVTTGAKHPLLFDYYGFPDYTYDLEYAPPGEPALASRIIDVLRAGGLKAKGDNDRGFDHGVFIPLKLMYPEADVPVVQVSLLAGLDSEVHLRIGAALGTLALEEDVLIVCSGQATHNSHSSYPSYPPGKGAPREKAFVDWLKETAASSTVTPDERRRRLREWETDAPHSRNAHPREEHLLPLHVAAGCAGFQRGEVIFD 836
+F+ HGGGP F M++ +GMMK + A A+W++ ++ + A++ VSAHWE + G +V + LLFDY GFP +TY L Y PG+PALA RI+D+L A GL + +DRG DHGVF+PLKLM PEA++PVVQVSLL LD+E HL +G AL LA +E VLIV SG TH S K A E AF WL T + + D R+ L +WE+ AP +R AH REEHLLP+HV AG AG+ E I D
Sbjct: 14 VFVGHGGGPCFFMED-TGMMKGMGRGSAVARWFQGLMDEYYTDDERAAIKAVVVVSAHWEHKANTVGVYRVD--GPNSLLFDYSGFPPHTYQLTYPAPGDPALADRILDLLDAHGLAGEAVSDRGLDHGVFVPLKLMLPEAELPVVQVSLLGSLDAEAHLELGEALAPLA-DEGVLIVGSGFVTHGS---------SKKAQTE-AFEGWLTTTLSDECASADHRKAALIDWES-APFARRAHIREEHLLPVHVVAGAAGYIPAERIQD 266
BLAST of mRNA_P-littoralis_Contig188.62.1 vs. uniprot
Match: A0A7X8D0G4_9SPIR (Dioxygenase n=1 Tax=Treponema sp. TaxID=166 RepID=A0A7X8D0G4_9SPIR) HSP 1 Score: 213 bits (541), Expect = 1.920e-60 Identity = 123/269 (45.72%), Postives = 160/269 (59.48%), Query Frame = 3
Query: 51 RPTSLFLSHGGGPGFLMKEGSGMMKQIDSTCAAAQWYRTFTKKWSKPAAIIAVSAHWEERGAVKVTTGAKHPLLFDYYGFPDYTYDLEYAPPGEPALASRIIDVLRAGGLKAKGDNDRGFDHGVFIPLKLMYPEADVPVVQVSLLAGLDSEVHLRIGAALGTLALEEDVLIVCSGQATHNSHSSYPSYPPGKGAP--REKAFVDWLKETAASSTVTPDERRRRLREWETDAPHSRNAHPREEHLLPLHVAAGCAGFQRGEVIFDDFAMG 851
R +L++ HGGGP L+ + G + +++ Q + +P AI+ VSAHWEE V+V GA LL+DYYGFP+ Y + Y PG P LA +I+ L G+ A+ D +RGFDHGVF+PL LMYPEADVP VQ+SL+ GLD HL +G AL L ED+LI+ SG + HN + G G P R +AF WL E+ AS + P ER RL WE PH+R HPREEHLLPLHV AG AG +R ++ +G
Sbjct: 5 RARALYIPHGGGPLPLLGD-PGHAELVEALSGLGQ-------ELGRPDAILVVSAHWEEP-EVRVIAGASPGLLYDYYGFPEEAYRIRYPAPGAPDLADQILAALGRAGIPARLDGERGFDHGVFVPLALMYPEADVPCVQISLIRGLDPRAHLELGRALSALE-GEDLLILGSGFSFHNVREFFAG---GAGGPDSRNEAFQAWLAESCASPAIEPPERLGRLEGWER-VPHARYCHPREEHLLPLHVCAGFAGGRRASRVWSWSVLG 259 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig188.62.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig188.62.1 >prot_P-littoralis_Contig188.62.1 ID=prot_P-littoralis_Contig188.62.1|Name=mRNA_P-littoralis_Contig188.62.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=298bp MEHPRPTSLFLSHGGGPGFLMKEGSGMMKQIDSTCAAAQWYRTFTKKWSKback to top mRNA from alignment at P-littoralis_Contig188:317980..323832- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig188.62.1 ID=mRNA_P-littoralis_Contig188.62.1|Name=mRNA_P-littoralis_Contig188.62.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5853bp|location=Sequence derived from alignment at P-littoralis_Contig188:317980..323832- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig188:317980..323832- >mRNA_P-littoralis_Contig188.62.1 ID=mRNA_P-littoralis_Contig188.62.1|Name=mRNA_P-littoralis_Contig188.62.1|organism=Pylaiella littoralis U1_48|type=CDS|length=894bp|location=Sequence derived from alignment at P-littoralis_Contig188:317980..323832- (Pylaiella littoralis U1_48)back to top |