mRNA_P-littoralis_Contig187.15.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig187.15.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 189 bits (479), Expect = 9.360e-57 Identity = 102/181 (56.35%), Postives = 117/181 (64.64%), Query Frame = 1
Query: 1 RRPFDRYCTSPSAVDALVAEVSIEGVVLDMCGGRMDAVALRLGLSCTVVTNDVRNSFP------------REYLEKAG---QPDWVVTSPPYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTPAH-VIVGESWGVWYKETDGS------GTRMAFCP 477
RR DRYCT P AV+ L V+I G VLDMCGG DAVA +C V+TNDV + R+ KA QPDWVVTSPPY+GA+ FVK+AL VA GVALKLPLSFLEPCADRG WL +NPP+VC+ LRR +T AH V VGE WGVWY TDG G+R+ FCP
Sbjct: 123 RRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVATKGVALKLPLSFLEPCADRGGWLVDNPPAVCIFLRRAKYTHAHHVKVGEFWGVWY--TDGGCCGKSGGSRLVFCP 301
BLAST of mRNA_P-littoralis_Contig187.15.1 vs. uniprot
Match: A0A6H5K049_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K049_9PHAE) HSP 1 Score: 185 bits (469), Expect = 3.460e-56 Identity = 92/160 (57.50%), Postives = 113/160 (70.62%), Query Frame = 1
Query: 1 RRPFDRYCTSPSAVDALVAEVSIEGVVLDMCGGRMDAVALRLGLSCTVVTNDV-------------RNSFPREYL--EKAGQPDWVVTSPPYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTPAHVIVGESWGVWY 435
RR DRYCTSP+ ++AL+ VSI G VLDMCGG DAVA+RL +C V+TNDV SF ++L QPDW+VTSPPY+GA+ FVK+AL VA+ GVALKLPLSFLEPCADR WL+ NPP++C+++ R + PAHV VGE WGVWY
Sbjct: 65 RRCVDRYCTSPATLEALLGVVSISGCVLDMCGGTDDAVAIRLRDTCQVLTNDVGPRLSPATNLDASSASFTDDFLAAHHGQQPDWIVTSPPYKGALAFVKAALTVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAHVRVGEFWGVWY 224
BLAST of mRNA_P-littoralis_Contig187.15.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.480e-51 Identity = 93/182 (51.10%), Postives = 117/182 (64.29%), Query Frame = 1
Query: 1 RRPFDRYCTSPSAVDALVAEVSIEGVVLDMCGGRMDAVALRLGLSCTVVTNDV-------------------RNSFPREYLEKA--GQPDWVVTSPPYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTPAHVIVGESWGVWY----KETDGSGTRMAF 471
RR DRYCTS AV+AL+ V++ G VLDMCGG DAVA +L +C VVTNDV +++F E+L QP+ VV SPPY+GA+ FVK+AL VA++GVALK LSFLEPC DR WL+ NPP+VCV LRR ++TP HV++GE WGVWY T GT++ F
Sbjct: 113 RRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKRSLSFLEPCVDRADWLEANPPTVCVFLRRASYTPEHVMMGEFWGVWYCTGGDRTAVGGTKLVF 294
BLAST of mRNA_P-littoralis_Contig187.15.1 vs. uniprot
Match: D7FJU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU4_ECTSI) HSP 1 Score: 162 bits (410), Expect = 2.380e-47 Identity = 84/143 (58.74%), Postives = 99/143 (69.23%), Query Frame = 1
Query: 1 RRPFDRYCTSPSAVDALVAEVSIEGVVLDMCGGRMDAVALRLGLSCTVVTNDVRN------------------SFPREYL-EKAGQ-PDWVVTSPPYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCV 369
RR DRYCTSP AV+AL+ V +EG VLDMCGG DA+A RLG +C VVTND+ SF ++L K GQ PDWV+TSPPY+GA+ +VKSAL +A GVALKLPLSFLEPCADRG WL+ NPP+VCV
Sbjct: 77 RRCLDRYCTSPEAVEALLGAVELEGCVLDMCGGPGDAIATRLGATCKVVTNDISTRLSPGGLPPDTNLDASLASFAVDFLLAKPGQRPDWVLTSPPYKGALEYVKSALSLAAKGVALKLPLSFLEPCADRGGWLQANPPAVCV 219
BLAST of mRNA_P-littoralis_Contig187.15.1 vs. uniprot
Match: A0A6H5K929_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K929_9PHAE) HSP 1 Score: 155 bits (391), Expect = 1.240e-45 Identity = 80/136 (58.82%), Postives = 94/136 (69.12%), Query Frame = 1
Query: 88 MCGGRMDAVALRLGLSCTVVTNDVRNSFPREYLEKAGQPDWVVTSPPYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTPAH-VIVGESWGVWYKETDGS-----GTRMAFCP 477
MCGG DAVAL G +C V+TNDV + + K QPDWVVTSPPY+GA+ FVK+ L VA GVAL+LPLSF +PCADRG WL +NPP +C LRR +T AH V VGE WGVWY TDG G+R+ FCP
Sbjct: 1 MCGGPEDAVALGFGGTCEVLTNDVSSRLSPAHPGK--QPDWVVTSPPYKGAVGFVKAVLAVAAKGVALRLPLSFRKPCADRGSWLVDNPPVMCGFLRRAKYTHAHHVKVGEFWGVWY--TDGGCGKSGGSRLVFCP 132
BLAST of mRNA_P-littoralis_Contig187.15.1 vs. uniprot
Match: D8LSI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI1_ECTSI) HSP 1 Score: 142 bits (359), Expect = 1.440e-40 Identity = 73/148 (49.32%), Postives = 93/148 (62.84%), Query Frame = 1
Query: 88 MCGGRMDAVALRLGLSCTVVTNDVRNS-------------FPREYLE--KAGQPDWVVTSPPYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTPAH-VIVGESWGVWYKETDG--SGTRMAFCP 477
MCGG DAVA RL +C ++TNDV + FP ++L +P+WVVTSPPY A+ FVK+A+ +A GVA K+P+ FLEPCADRG WL+ NPPSVCV LRR +T A+ GE WGVWY + + TR+ FCP
Sbjct: 1 MCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLNASLELFPEDFLAAYSGKRPEWVVTSPPYSRALTFVKAAMSLATKGVAFKMPIFFLEPCADRGGWLQTNPPSVCVFLRRAKYTRANNAKTGEFWGVWYPQEMSCRNRTRLVFCP 148
BLAST of mRNA_P-littoralis_Contig187.15.1 vs. uniprot
Match: A0A6H5KAM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAM1_9PHAE) HSP 1 Score: 138 bits (348), Expect = 4.000e-39 Identity = 65/110 (59.09%), Postives = 81/110 (73.64%), Query Frame = 1
Query: 166 SFPREYL--EKAGQPDWVVTSPPYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTPAHVIVGESWGVWYKETDGSG----TRMAFCP 477
S+ +YL QPDWVV SPPY+GA++FVK+AL VA+ GVALKLPLSFLEPCADR WL+ENPPS+C+++ R + PAHV VGE WGVWY GS T+++F P
Sbjct: 22 SYADDYLAAHNGQQPDWVVASPPYKGALSFVKAALTVAKEGVALKLPLSFLEPCADRAGWLQENPPSLCMMMSRARYQPAHVRVGEFWGVWYPPGGGSSIGDSTKLSFLP 131
BLAST of mRNA_P-littoralis_Contig187.15.1 vs. uniprot
Match: A0A6H5JSV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSV3_9PHAE) HSP 1 Score: 130 bits (327), Expect = 2.040e-35 Identity = 59/97 (60.82%), Postives = 71/97 (73.20%), Query Frame = 1
Query: 199 QPDWVVTSPPYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTPAHVIVGESWGVWYKETDG----SGTRMAFCP 477
QPDWVVT PPY GA+ FVK+AL VA+ GVALKLPLSFLEPCADR WL+ NPP++C+++ R + PAHV VGE WGVWY G T++ F P
Sbjct: 76 QPDWVVTRPPYNGALAFVKAALPVAKKGVALKLPLSFLEPCADRAGWLQANPPALCMMMSRARYQPAHVRVGEFWGVWYPPGSGYSSSDSTKLLFVP 172
BLAST of mRNA_P-littoralis_Contig187.15.1 vs. uniprot
Match: A0A6H5JT40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT40_9PHAE) HSP 1 Score: 127 bits (319), Expect = 1.020e-34 Identity = 62/110 (56.36%), Postives = 77/110 (70.00%), Query Frame = 1
Query: 166 SFPREYL--EKAGQPDWVVTSPPYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTPAHVIVGESWGVWYKETDGSG----TRMAFCP 477
SF +YL QPDWVV+SPPY GA+ FVK+AL VA+ GVALKLPLSFLEPCADR +WL+ NPP++C+++ R + PA V VGE GVWY GS T++ F P
Sbjct: 23 SFADDYLAAHNGQQPDWVVSSPPYEGALAFVKAALTVAKEGVALKLPLSFLEPCADRAVWLQANPPALCMMMSRARYQPALVRVGEFRGVWYPPGSGSSSSDSTKLLFLP 132
BLAST of mRNA_P-littoralis_Contig187.15.1 vs. uniprot
Match: A0A6H5K9B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9B9_9PHAE) HSP 1 Score: 127 bits (319), Expect = 1.460e-34 Identity = 56/84 (66.67%), Postives = 67/84 (79.76%), Query Frame = 1
Query: 202 PDWVVTSPPYRGAINFVKSALGVARYGVALKLPLSFLEPCADRGIWLKENPPSVCVVLRRVTHTPAHVIVGESWGVWYKETDGS 453
PDWVVTSPPY+GA+ FVK+AL VA+ VALKLPLSFLEPCADR WL+ NPP++C+++ R + PAHV VGE WGVWY GS
Sbjct: 57 PDWVVTSPPYKGALGFVKAALTVAKESVALKLPLSFLEPCADREGWLQANPPALCMMMSRARYQPAHVRVGEFWGVWYPPGSGS 140 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig187.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig187.15.1 >prot_P-littoralis_Contig187.15.1 ID=prot_P-littoralis_Contig187.15.1|Name=mRNA_P-littoralis_Contig187.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=131bp MCGGRMDAVALRLGLSCTVVTNDVRNSFPREYLEKAGQPDWVVTSPPYRGback to top mRNA from alignment at P-littoralis_Contig187:150863..151655- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig187.15.1 ID=mRNA_P-littoralis_Contig187.15.1|Name=mRNA_P-littoralis_Contig187.15.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=793bp|location=Sequence derived from alignment at P-littoralis_Contig187:150863..151655- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig187:150863..151655- >mRNA_P-littoralis_Contig187.15.1 ID=mRNA_P-littoralis_Contig187.15.1|Name=mRNA_P-littoralis_Contig187.15.1|organism=Pylaiella littoralis U1_48|type=CDS|length=393bp|location=Sequence derived from alignment at P-littoralis_Contig187:150863..151655- (Pylaiella littoralis U1_48)back to top |