prot_P-littoralis_Contig186.150.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig186.150.1
Unique Nameprot_P-littoralis_Contig186.150.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length307
Homology
BLAST of mRNA_P-littoralis_Contig186.150.1 vs. uniprot
Match: D7FKT8_ECTSI (TLC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT8_ECTSI)

HSP 1 Score: 531 bits (1367), Expect = 2.930e-187
Identity = 267/307 (86.97%), Postives = 284/307 (92.51%), Query Frame = 0
Query:    1 MSDEDVLSWKRGWIPSAIALGLTFLPLPSVGLQAFEAGWMRGLATFIALEVVRVGAVGLLPYWWRDVAGRADPLTDRSREQFGGQLTSLLLSSYLTWSIIRWDWQLTTKIPFIQTVGEDHTGVVFSLMAMMLSYIVHDTWHLIRSWRVNRNRVMLIHHFVFAVISIMGMRFMQLPIHMRIHFIMFSAEMSTPLLNGRWLLRHIGLVHKSHFIMIATSFSFLVLFLATRIMMYLFMILDIIQLYAELIMPMPLRSIFLGAVVVSYGVNLYWASLIVGALFGKEGDGKPRGGPTLTLGHPDT-KKEKDS 306
            MS+ DVLSWKRGWIPSAIA+ L FLPL SVGL+AFE GW RG+A F+ALEVVRVGAVGLLPYWWR++A R  PLTDRSREQFGGQLTSLL+SSYLTWSIIRWDWQLT K+PFIQTVGEDHTGVVFSLMA+MLSYIVHDTWHL+RSWRVNRNRVMLIHHFVFAVISIMGMRF QLPIHMRIHFIMFSAEMSTPLLNGRWL+RHIGLVHKSH IMIATSFSFLVLFL TRIM+YLFMILDIIQLYAELIMPMPLRS+FLGAVVVSY VNLYWA LI+GALFG EG  K RGGPTLT+ HPDT KK KD+
Sbjct:  127 MSNNDVLSWKRGWIPSAIAVSLLFLPLESVGLEAFEPGWERGIAAFVALEVVRVGAVGLLPYWWREIARRTGPLTDRSREQFGGQLTSLLVSSYLTWSIIRWDWQLTNKLPFIQTVGEDHTGVVFSLMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLVLFLVTRIMLYLFMILDIIQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLIIGALFGNEG--KRRGGPTLTVNHPDTQKKSKDA 431          
BLAST of mRNA_P-littoralis_Contig186.150.1 vs. uniprot
Match: A0A6H5K373_9PHAE (TLC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K373_9PHAE)

HSP 1 Score: 527 bits (1358), Expect = 1.390e-185
Identity = 266/307 (86.64%), Postives = 281/307 (91.53%), Query Frame = 0
Query:    1 MSDEDVLSWKRGWIPSAIALGLTFLPLPSVGLQAFEAGWMRGLATFIALEVVRVGAVGLLPYWWRDVAGRADPLTDRSREQFGGQLTSLLLSSYLTWSIIRWDWQLTTKIPFIQTVGEDHTGVVFSLMAMMLSYIVHDTWHLIRSWRVNRNRVMLIHHFVFAVISIMGMRFMQLPIHMRIHFIMFSAEMSTPLLNGRWLLRHIGLVHKSHFIMIATSFSFLVLFLATRIMMYLFMILDIIQLYAELIMPMPLRSIFLGAVVVSYGVNLYWASLIVGALFGKEGDGKPRGGPTLTLGHPDT-KKEKDS 306
            MS+ DVLSWKRGWIPSAIA+ L FLPL SVGL+ FE GW RG+A F+ALEVVRVGAV LLPYWWRDVA R  PLTDRSREQFGGQLTSLL+SSYLTWSIIRWDWQLT K+PFIQTVGEDHTGVVFSLMA+MLSYIVHDTWHL+RSWRVNRNRVMLIHHFVFAVISIMGMRF QLPIHMRIHFIMFSAEMSTPLLNGRWL+RHIGLVHKSH IMIATSFSFL LFL TRI+MYLFMILDIIQLYAELIMPMPLRS+FLGAVVVSY VNLYWA LI+GALFG EG  K RGGPTLT+ HPDT KK KD+
Sbjct:  147 MSNNDVLSWKRGWIPSAIAVSLLFLPLESVGLEVFEPGWERGIAAFVALEVVRVGAVALLPYWWRDVARRTGPLTDRSREQFGGQLTSLLVSSYLTWSIIRWDWQLTNKLPFIQTVGEDHTGVVFSLMAIMLSYIVHDTWHLVRSWRVNRNRVMLIHHFVFAVISIMGMRFRQLPIHMRIHFIMFSAEMSTPLLNGRWLMRHIGLVHKSHVIMIATSFSFLALFLVTRILMYLFMILDIIQLYAELIMPMPLRSVFLGAVVVSYVVNLYWAWLIIGALFGNEG--KRRGGPTLTVNHPDTQKKSKDT 451          
BLAST of mRNA_P-littoralis_Contig186.150.1 vs. uniprot
Match: A0A835ZB74_9STRA (TLC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB74_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.690e-35
Identity = 98/297 (33.00%), Postives = 153/297 (51.52%), Query Frame = 0
Query:   12 GWIPSAIALGLTFLPLPSVGLQAFEAGWMRGLATFIALEVVRVGAVGLLPYWWRDVAGRADPLTDRS-REQFGGQLTSLLLSSYLTWSIIRWDWQLTTKIPFIQTVGE-DHTGVVFSLMAMMLSYIVHDTWHLIRSWRVNRNRVMLIHHFVFAVISIMGMRFMQLPIHMRIHFIMFSAEMSTPLLNGRWLLRHIGLVHKSHFIMIATSFSFLVLFLATRIMMYLFMILDII------QLYAELI-------------------------MPMPLRSIFLGAVVVSYGVNLYWASLIV 275
            GWIP A+ L   +     V     ++ W    +T+ A E +R+ AV LLP WWR   G A    +R+ RE FG Q  SL +S+Y    + +     + ++PF+ T  + D   ++  +  ++ +Y++ DT HLIR+W ++ N  ML+HH +F+V+  +G    QLP H RIH ++FSAE+STPLLN RW+LR +   H    ++   S +F +LFL +R+ +Y  +I D++      QL   L+                          P   + IF  AV  SY +NLYW  +I+
Sbjct:   15 GWIPGALVLAGLYCT--GVFDTEDKSLWHTAWSTYAACEALRMVAVWLLPLWWRRRRGGAP---ERAIRESFGTQAMSLAVSTYTVAHLAQLRLYASWELPFLHTAADADCIALIHHMTVVLGTYVICDTSHLIRTWHLSSNPAMLLHHAIFSVVLGLGAANPQLPPHYRIHVVLFSAELSTPLLNLRWILRWVA--HYKGRLVAPLSMAFALLFLFSRVGLYGALIADLVKKQPHRQLDVRLLRAACCLHTSFCGSSAWPVKTRRKLSFPRAQQDIFCAAVFCSYLLNLYWLIIII 304          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig186.150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FKT8_ECTSI2.930e-18786.97TLC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5K373_9PHAE1.390e-18586.64TLC domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835ZB74_9STRA3.690e-3533.00TLC domain-containing protein n=1 Tax=Tribonema mi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 77..283
e-value: 0.0026
score: 17.6
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 90..275
e-value: 8.9E-17
score: 61.5
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 77..283
score: 14.859671
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 90..279
NoneNo IPR availablePANTHERPTHR13439:SF0BCDNA.GH12326coord: 90..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig186contigP-littoralis_Contig186:424223..425143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig186.150.1mRNA_P-littoralis_Contig186.150.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig186 423051..429364 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig186.150.1 ID=prot_P-littoralis_Contig186.150.1|Name=mRNA_P-littoralis_Contig186.150.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=307bp
MSDEDVLSWKRGWIPSAIALGLTFLPLPSVGLQAFEAGWMRGLATFIALE
VVRVGAVGLLPYWWRDVAGRADPLTDRSREQFGGQLTSLLLSSYLTWSII
RWDWQLTTKIPFIQTVGEDHTGVVFSLMAMMLSYIVHDTWHLIRSWRVNR
NRVMLIHHFVFAVISIMGMRFMQLPIHMRIHFIMFSAEMSTPLLNGRWLL
RHIGLVHKSHFIMIATSFSFLVLFLATRIMMYLFMILDIIQLYAELIMPM
PLRSIFLGAVVVSYGVNLYWASLIVGALFGKEGDGKPRGGPTLTLGHPDT
KKEKDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom