mRNA_P-littoralis_Contig186.144.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig186.144.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE) HSP 1 Score: 221 bits (562), Expect = 7.650e-64 Identity = 101/152 (66.45%), Postives = 122/152 (80.26%), Query Frame = 1
Query: 76 NFCRDGNFVVRDRLYNKRQPFTFIEDEDIAERCREYIDQRLYCRKKGERRFRIADFQRWVNTVCLRKELAGGAGISRSTARSWIVALGFRWARHAKRVYADGHNRPDVLEARKEFTAQMFILRRTMFIPHQVETTVMVKAPDAEDREWASTE 531
+FC+DGNFVV R Y KRQPF +I+DEDI E+CREY+D+R+Y RKKG+ RFR+ADFQRWVNTVCL++E AGG GI RSTA WI LGFRW RH K VY DGHNRPDV++AR+ +T +MF++RR M IP +VET VMVK DA DRE ST+
Sbjct: 46 DFCKDGNFVVPHREYVKRQPFCYIDDEDIREQCREYVDERIYRRKKGQPRFRVADFQRWVNTVCLKEEFAGGGGICRSTAHVWIAQLGFRWRRHGKCVYVDGHNRPDVVQARRLYTEKMFVMRRLMSIPEKVETVVMVKVRDARDREKTSTD 197
BLAST of mRNA_P-littoralis_Contig186.144.1 vs. uniprot
Match: A0A6H5K527_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K527_9PHAE) HSP 1 Score: 218 bits (556), Expect = 8.880e-63 Identity = 100/152 (65.79%), Postives = 121/152 (79.61%), Query Frame = 1
Query: 76 NFCRDGNFVVRDRLYNKRQPFTFIEDEDIAERCREYIDQRLYCRKKGERRFRIADFQRWVNTVCLRKELAGGAGISRSTARSWIVALGFRWARHAKRVYADGHNRPDVLEARKEFTAQMFILRRTMFIPHQVETTVMVKAPDAEDREWASTE 531
+FC+DG FVV R Y KRQPF +I+DEDI E+CREY+D+R+Y RKKG+ RFR+ADFQRWVNTVCL++E AGG GI RSTA WI LGFRW RH K VY DGHNRPDV++AR+ +T +MF++RR M IP +VET VMVK DA DRE ST+
Sbjct: 500 DFCKDGKFVVPHREYVKRQPFCYIDDEDIREQCREYVDERIYRRKKGQPRFRVADFQRWVNTVCLKEEFAGGGGICRSTAHVWIAQLGFRWRRHGKCVYVDGHNRPDVVQARRLYTEKMFVMRRLMSIPEKVETVVMVKVRDARDREKTSTD 651
BLAST of mRNA_P-littoralis_Contig186.144.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE) HSP 1 Score: 200 bits (508), Expect = 3.790e-56 Identity = 95/146 (65.07%), Postives = 114/146 (78.08%), Query Frame = 1
Query: 79 FCRDGNFVVRDRLYNKRQPFTFIEDEDIAERCREYIDQRLYCRKKGERRFRIADFQRWVNTVCLRKELAGGAGISRSTARSWIVALGFRWARHAKRVYADGHNRPDVLEARKEFTAQMFILRRTMFIPHQVETTVMVKAPDAEDRE 516
FC+DG FVV DR Y KRQPFT+I+DEDI ++CREYID+R+Y R+KG R FR+ADF RWVN VCL +E G GISRSTA WI LGFRW RH K VY DGHNRPDV+EAR+ +T +MF++RR + IP +VET VMVK DAE+ E
Sbjct: 463 FCKDGKFVVPDRAYVKRQPFTYIDDEDIRDQCREYIDERIY-RRKGTR-FRVADFHRWVNEVCLEEEFKDGGGISRSTAHHWISQLGFRWRRHGKCVYVDGHNRPDVVEARRLYTEKMFVMRRIISIPEKVETVVMVKVRDAEEGE 606
BLAST of mRNA_P-littoralis_Contig186.144.1 vs. uniprot
Match: A0A6H5KDG4_9PHAE (Uncharacterized protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDG4_9PHAE) HSP 1 Score: 198 bits (503), Expect = 1.790e-55 Identity = 99/190 (52.11%), Postives = 120/190 (63.16%), Query Frame = 1
Query: 76 NFCRDGNFVVRDRLYNKRQPFTFIEDEDIAERCREYIDQRLYCRKKGERRFRIADFQRWVNTVCLRKELAGGAGISRSTARSWIVALGFRWARHAKR--------------------------------------VYADGHNRPDVLEARKEFTAQMFILRRTMFIPHQVETTVMVKAPDAEDREWASTE 531
+FC+DG FVV R Y KRQPF +I+DEDI E+CREY+D+R+Y RKKG+ RFR+ADFQRWVNTVCL++E AGG GI RSTA WI LGFRW RH VY DGHNRPDV++AR+ +T +MF++RR M IP +VET VMVK DA DRE ST+
Sbjct: 495 DFCKDGKFVVPHREYVKRQPFCYIDDEDIREQCREYVDERIYRRKKGQPRFRVADFQRWVNTVCLKEEFAGGGGICRSTAHVWIAQLGFRWRRHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCVYVDGHNRPDVVQARRLYTEKMFVMRRLMSIPEKVETVVMVKVRDARDREKTSTD 684
BLAST of mRNA_P-littoralis_Contig186.144.1 vs. uniprot
Match: A0A6H5L796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L796_9PHAE) HSP 1 Score: 172 bits (437), Expect = 1.650e-49 Identity = 83/141 (58.87%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 79 FCRDGNFVVRDRLYNKRQPFTFIEDEDIAERCREYIDQRLYCRKKGERRFRIADFQRWVNTVCLRKELAGGAGISRSTARSWIVALGFRWARHAKRVYADGHNRPDVLEARKEFTAQMFILRRTMFIPHQVETTVMVKAPD 501
FC+DG F++R RLY Q +FI+ EDIAERCRE ID+RLY RKK + RFR++DFQRWVNTV L++ +GG GISR+TA SWI LGFRW + K VY DGHNRPDV+EAR+E+ A+M ILR+ M I V + AP+
Sbjct: 25 FCQDGKFLIRKRLYEISQADSFIDHEDIAERCREEIDRRLYRRKKTDPRFRVSDFQRWVNTVLLKEVFSGGGGISRTTAHSWICRLGFRWKKSGKCVYVDGHNRPDVVEARQEYVAKMLILRKMMSIVLXVTMARVRDAPE 165
BLAST of mRNA_P-littoralis_Contig186.144.1 vs. uniprot
Match: A0A6H5L7Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Z5_9PHAE) HSP 1 Score: 162 bits (409), Expect = 1.470e-47 Identity = 78/125 (62.40%), Postives = 95/125 (76.00%), Query Frame = 1
Query: 79 FCRDGNFVVRDRLYNKRQPFTFIEDEDIAERCREYIDQRLYCRKKGERRFRIADFQRWVNTVCLRKELAGGAGISRSTARSWIVALGFRWARHAKRVYADGHNRPDVLEARKEFTAQMFILRRTM 453
FC+DG F++ RLY RQ +FI+ EDIAERCRE ID+RLY RKK + FR++DFQRWVNTV L++ +GG GISR+TA SWI LGFRW + K VY DGHNRPDV EAR E+ A+M ILR+ M
Sbjct: 56 FCQDGKFLISKRLYEIRQADSFIDPEDIAERCREEIDRRLYRRKKTDPWFRVSDFQRWVNTVLLKEVFSGGGGISRTTAHSWICRLGFRWKKSGKCVYVDGHNRPDV-EARPEYVAKMLILRKMM 179
BLAST of mRNA_P-littoralis_Contig186.144.1 vs. uniprot
Match: A0A6H5J7G3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7G3_9PHAE) HSP 1 Score: 171 bits (433), Expect = 7.690e-47 Identity = 79/125 (63.20%), Postives = 98/125 (78.40%), Query Frame = 1
Query: 79 FCRDGNFVVRDRLYNKRQPFTFIEDEDIAERCREYIDQRLYCRKKGERRFRIADFQRWVNTVCLRKELAGGAGISRSTARSWIVALGFRWARHAKRVYADGHNRPDVLEARKEFTAQMFILRRTM 453
FC+DG F++R RLY Q +FI+ EDIAERCRE ID+RLY RKK + RFR++DFQRWVNTV L++ +GG GISR+TA SWI LGFRW + K VY DGHNRPDV+EAR+E+ A+M ILR+ M
Sbjct: 522 FCQDGKFLIRKRLYEISQADSFIDHEDIAERCREEIDRRLYRRKKTDPRFRVSDFQRWVNTVLLKEVFSGGGGISRTTAHSWICRLGFRWKKSGKCVYVDGHNRPDVVEARREYVAKMLILRKMM 646
BLAST of mRNA_P-littoralis_Contig186.144.1 vs. uniprot
Match: A0A6H5JJM4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJM4_9PHAE) HSP 1 Score: 164 bits (416), Expect = 7.710e-44 Identity = 81/151 (53.64%), Postives = 103/151 (68.21%), Query Frame = 1
Query: 79 FCRDGNFVVRDRLYNKRQPFTFIEDEDIAERCREYIDQRLYCRKKGERRFRIADFQRWVNTVCLRKELAGGAGISRSTARSWIVALGFRWARHAKRVYADGHNRPDVLEARKEFTAQMFILRRTMFIPHQVETTVMVKAPDAEDREWASTE 531
FC+ +FVVR R YNKR+P ++I+DEDI R REYID+RLY RKK E R RIAD Q+W+N L++ELAG GISR T W+ LGFRW+RH K VY DGHNRPDV+ R+ F + L + M IP +VE TVMV E R+ +++
Sbjct: 25 FCKGDSFVVRKRQYNKREPHSYIDDEDIRGRLREYIDRRLYRRKKDEPRLRIADVQKWINEDLLKEELAGTRGISRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVELLKRLHQNMSIPVRVEETVMVATSRGEARQEGASD 175
BLAST of mRNA_P-littoralis_Contig186.144.1 vs. uniprot
Match: A0A6H5JH07_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH07_9PHAE) HSP 1 Score: 162 bits (411), Expect = 3.260e-43 Identity = 79/151 (52.32%), Postives = 103/151 (68.21%), Query Frame = 1
Query: 79 FCRDGNFVVRDRLYNKRQPFTFIEDEDIAERCREYIDQRLYCRKKGERRFRIADFQRWVNTVCLRKELAGGAGISRSTARSWIVALGFRWARHAKRVYADGHNRPDVLEARKEFTAQMFILRRTMFIPHQVETTVMVKAPDAEDREWASTE 531
FC G+FVVR R YNKR+ ++I+DED+ R REYID+RLY RKK E R RIAD Q+W++ L++ELAG G+SR T W+ LGFRW+RH K VY DGHNRPDV+ R+ F A + LR+ M IP +VE TVM E R+ +++
Sbjct: 386 FCNGGSFVVRKRQYNKREAHSYIDDEDVRYRLREYIDRRLYRRKKDEPRLRIADVQKWIHEDLLKEELAGTRGVSRRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVALLKRLRQKMSIPLRVEETVMTATSRGEARQEGASD 536
BLAST of mRNA_P-littoralis_Contig186.144.1 vs. uniprot
Match: A0A6H5K550_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K550_9PHAE) HSP 1 Score: 160 bits (404), Expect = 3.360e-42 Identity = 78/151 (51.66%), Postives = 102/151 (67.55%), Query Frame = 1
Query: 79 FCRDGNFVVRDRLYNKRQPFTFIEDEDIAERCREYIDQRLYCRKKGERRFRIADFQRWVNTVCLRKELAGGAGISRSTARSWIVALGFRWARHAKRVYADGHNRPDVLEARKEFTAQMFILRRTMFIPHQVETTVMVKAPDAEDREWASTE 531
FC G+FVVR R YNKR+ ++I+DED+ R REYID+RLY RKK E R RIAD Q+W++ L++ELAG G+S T W+ LGFRW+RH K VY DGHNRPDV+ R+ F A + LR+ M IP +VE TVM E R+ +++
Sbjct: 69 FCNGGSFVVRKRQYNKREAHSYIDDEDVRYRLREYIDRRLYRRKKNEPRLRIADVQKWIHEDLLKEELAGTRGVSWRTVHKWMQKLGFRWSRHHKCVYVDGHNRPDVVTDRRSFVALLKRLRQKMSIPLRVEETVMTATSRGEARQEGASD 219 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig186.144.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig186.144.1 >prot_P-littoralis_Contig186.144.1 ID=prot_P-littoralis_Contig186.144.1|Name=mRNA_P-littoralis_Contig186.144.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=177bp SEDGPQPRRRPDGGRYCGDRAGLGGNFCRDGNFVVRDRLYNKRQPFTFIEback to top mRNA from alignment at P-littoralis_Contig186:413281..414458+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig186.144.1 ID=mRNA_P-littoralis_Contig186.144.1|Name=mRNA_P-littoralis_Contig186.144.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1178bp|location=Sequence derived from alignment at P-littoralis_Contig186:413281..414458+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig186:413281..414458+ >mRNA_P-littoralis_Contig186.144.1 ID=mRNA_P-littoralis_Contig186.144.1|Name=mRNA_P-littoralis_Contig186.144.1|organism=Pylaiella littoralis U1_48|type=CDS|length=531bp|location=Sequence derived from alignment at P-littoralis_Contig186:413281..414458+ (Pylaiella littoralis U1_48)back to top |