mRNA_P-littoralis_Contig183.34.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig183.34.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 179 bits (453), Expect = 1.680e-48 Identity = 81/106 (76.42%), Postives = 97/106 (91.51%), Query Frame = 3
Query: 336 YSGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVN 653
+SGNFGRSEYAR+ GLDK+AGYI+SADDSKLEEL++++RFF+KWR +L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N
Sbjct: 548 WSGNFGRSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFIN 653
BLAST of mRNA_P-littoralis_Contig183.34.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 160 bits (406), Expect = 9.520e-46 Identity = 76/111 (68.47%), Postives = 90/111 (81.08%), Query Frame = 3
Query: 321 MCMCIYSGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVN 653
+C+ I++GNFGRS+YARK GLDK GY SADDSKLE LMDILRFF++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ L D P ++N
Sbjct: 30 VCVRIHAGNFGRSDYARKNGLDKMVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFIN 138
BLAST of mRNA_P-littoralis_Contig183.34.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 152 bits (383), Expect = 9.070e-39 Identity = 69/103 (66.99%), Postives = 82/103 (79.61%), Query Frame = 3
Query: 345 NFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVN 653
NFGRS+YARK GLDK YI SADDSKLEE+MDIL F++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+ L D P ++N
Sbjct: 428 NFGRSDYARKNGLDKMVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFIN 530
BLAST of mRNA_P-littoralis_Contig183.34.1 vs. uniprot
Match: A0A6H5KH17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH17_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.020e-31 Identity = 57/78 (73.08%), Postives = 65/78 (83.33%), Query Frame = 3
Query: 342 GNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFV 575
GNFGRS+YARK GLDK GYI SADDSKLEELMDILRFF++WR +LE + TLG WK +FIT++SWTDIRV ILG V
Sbjct: 24 GNFGRSDYARKNGLDKMVGYIRSADDSKLEELMDILRFFDEWRASLEARPTLGGRAWKAYFITDHSWTDIRVCILGTV 101
BLAST of mRNA_P-littoralis_Contig183.34.1 vs. uniprot
Match: A0A6H5JZW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZW9_9PHAE) HSP 1 Score: 114 bits (285), Expect = 4.280e-29 Identity = 54/82 (65.85%), Postives = 62/82 (75.61%), Query Frame = 3
Query: 396 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTP 641
GYI S DDSKL+ELMDIL FF++WR +LE + TLGD WK HFIT++ WTD RV ILG V MCRYL E DSRFK+S L P
Sbjct: 3 GYIRSTDDSKLDELMDILWFFDEWRASLEARPTLGDGAWKAHFITDHLWTDSRVCILGTVRMCRYLIEKDSRFKISPLNMFP 84
BLAST of mRNA_P-littoralis_Contig183.34.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 108 bits (271), Expect = 3.280e-25 Identity = 55/113 (48.67%), Postives = 77/113 (68.14%), Query Frame = 3
Query: 333 IYSGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEK---TTLGD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLR-DTPRYVNP 656
I++GN+GRS+ RK G K G I S + + ++ L++IL FF+ W+ LE K + GD + WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ L + R+++P
Sbjct: 62 IFNGNYGRSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSP 174
BLAST of mRNA_P-littoralis_Contig183.34.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 100 bits (249), Expect = 7.460e-21 Identity = 46/91 (50.55%), Postives = 64/91 (70.33%), Query Frame = 3
Query: 333 IYSGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDD 605
I +G +G +E RK+G +K+ GYIT AD L L++IL FF+ W+ +LE G W HFIT+YSWTD+R +ILGFV+MCRY+F+D+
Sbjct: 471 IMNGVYGLNEVERKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSLEAH--FGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDE 559
BLAST of mRNA_P-littoralis_Contig183.34.1 vs. uniprot
Match: A0A6H5JNK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK0_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 2.010e-19 Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 3
Query: 396 GYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVS 578
GYI SAD SKLE LMDILRFF++WR +LE + TLGD TW+ HFIT++SWTDI+V ILG V+
Sbjct: 3 GYIRSADRSKLE-LMDILRFFDEWRASLEARPTLGDGTWEAHFITDHSWTDIQVCILGTVA 62
BLAST of mRNA_P-littoralis_Contig183.34.1 vs. uniprot
Match: A0A6H5K095_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K095_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 1.530e-15 Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 3
Query: 393 AGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYS 539
AGYI SADDSKLEELMDILRF +WR +LE ++TLGD WK HFIT++S
Sbjct: 2 AGYIRSADDSKLEELMDILRFLGEWRASLEARSTLGDCAWKAHFITDHS 50
BLAST of mRNA_P-littoralis_Contig183.34.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE) HSP 1 Score: 55.8 bits (133), Expect = 1.520e-5 Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = 3
Query: 348 FGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLE----EKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDD 605
+ R K +D + ITS D L+ L++IL +F+ W +L L D+ F+ + +W D+R++ILGFV+M RY+F DD
Sbjct: 493 YNRDPIDVSKRIDIRKSCITSKDSPLLDRLLEILEWFDTWWQDLNLFGGSDLALDDL-----FLPDQTWDDLRLTILGFVAMTRYVFGDD 577 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig183.34.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig183.34.1 >prot_P-littoralis_Contig183.34.1 ID=prot_P-littoralis_Contig183.34.1|Name=mRNA_P-littoralis_Contig183.34.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=143bp WLQRIDFVTYYADAGVRSAGWGLSGEFWGPVERFLQQLMQLAKNINNSAAback to top mRNA from alignment at P-littoralis_Contig183:192067..192724+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig183.34.1 ID=mRNA_P-littoralis_Contig183.34.1|Name=mRNA_P-littoralis_Contig183.34.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=658bp|location=Sequence derived from alignment at P-littoralis_Contig183:192067..192724+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig183:192067..192724+ >mRNA_P-littoralis_Contig183.34.1 ID=mRNA_P-littoralis_Contig183.34.1|Name=mRNA_P-littoralis_Contig183.34.1|organism=Pylaiella littoralis U1_48|type=CDS|length=429bp|location=Sequence derived from alignment at P-littoralis_Contig183:192067..192724+ (Pylaiella littoralis U1_48)back to top |