mRNA_P-littoralis_Contig18.149.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 533 bits (1374), Expect = 3.710e-160 Identity = 289/453 (63.80%), Postives = 355/453 (78.37%), Query Frame = 1
Query: 1054 QLFLTPCALFILVVDMSAYSDKHSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRDVDDFINRNRSECASAKAYAECESSKGQP-DLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGESEKRRSFIKFSEALSLFVEQQ-TMFTRISKFFRHEHE-RRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAELQ*SMVVQE-IEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWRRDMKLGQGSQEAQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 2400
Q+FLTP ALF+LVVDM Y++ SREDAL QWL+IL RVPGSVVLLVGTH+D F ++ +C RT F++DV++ + R R EC SAK E E +G DL+ R+QPLRVV++E++L+L+L SSDGQDID+LQ+R+EHLAY+G++ + F SV SVVPEPYLPA+ATLEAVRRGADLRGSG TR VA+RLGE G+ +KRRSF++FSEA+SLF +Q+ +MF+R+S FR E RR+F A++ HE HGAILLT VD GGG QE+ G GAA +L+IHVNPS+FAD VRRVVDVR + + V+E +EA +SVR +LL L++QHKRFVKAGEVSK+YLKFLW RDM LG+ SQEA PLEMSE D+ V+VGSLL +RFMYRVRDG AF+ DR+VVASCL NKAG VD KILELK G AI+S+ LKLVGAHAVPPGLV R LA
Sbjct: 433 QMFLTPGALFVLVVDMFTYTEGQSREDALEQWLEILQARVPGSVVLLVGTHTDLFAENAAECTRRTDRFKKDVEEIMTRLRCECDSAKDRVETELGEGHTTDLKGNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGYDGYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGE-GDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQAKVEEAMEACTSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEASQEAPPLEMSEADVEVMVGSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGLNVDPGKILELKMGSAIYSQKLKLVGAHAVPPGLVPRLLA 884
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE) HSP 1 Score: 499 bits (1284), Expect = 1.920e-150 Identity = 277/474 (58.44%), Postives = 344/474 (72.57%), Query Frame = 1
Query: 1054 QLFLTPCALFILVVDMSAYSDKHSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRDVDDFINRNRSECASAKAYAECESSKGQPDLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGESEKRRSFIKFSEALSLFVEQQ--TMFTRISK----------------------FFRHEHERRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAE-LQ*SMVVQEIEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWRRDMKLGQGSQEAQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 2400
Q+FLT ALF+LVVDM AY++ HS EDA+ QWLDIL RVPG+V+LLVGTH+D F ++ +C +RT F++DV+ + R +C SAK AE E + PDL+ ++PLRVV+EED+L+L+L SSD +DI +LQ R+EHLAY+G++ + FSSV SVVPEPYLP +ATLEAVR GADLRGSGGTR V +RL EG+ KRRSF++FSEA+SL +QQ + +R+S F R + RR+F AI+ HE +GAILLT VD GG QE+ G GAA +L+IHVNPS+FAD VRRVVDVR + Q V Q + A SVR +LL L++QHKRFVKAGEVSK+YLKFLW RDM+LGQ S EA PLEMSE D+ V+VGSLL +RFMYRVRDG DAF+ DR+VVASCL NKAGP+VD K+LELK G A++S+ LKLVGAHAVPPGLV R LA
Sbjct: 138 QMFLTQGALFVLVVDMFAYAEGHSPEDAVEQWLDILQARVPGAVLLLVGTHTDLFEDNATECTKRTDRFKKDVEKIMKRISCQCDSAKNLAETELGERHPDLEGNPHYRPLRVVLEEDLLTLDLTSSDWEDIGLLQRRLEHLAYNGYDGYSFSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRL-REGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAACPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASPEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAGPEVDPGKMLELKAGSAVYSQKLKLVGAHAVPPGLVPRLLA 610
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE) HSP 1 Score: 443 bits (1139), Expect = 2.150e-130 Identity = 261/473 (55.18%), Postives = 317/473 (67.02%), Query Frame = 1
Query: 1054 QLFLTPCALFILVVDMSAYSDKHSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQR-------------------DVDDFINRNRSECASAKAYAECESSKGQP-DLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGESEKRRSFIKFSEALSLFVEQQ--TMFTRISKFFRHEHE-RRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRW-AELQ*SMVVQEIEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWRRDMKLGQGSQEAQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 2400
Q+FLTP ALF+LVVDM Y S+EDAL QWL+IL RVPGS++LLVGTH+D F ++ +C RT +F+ DVDD + R R EC SAK AE E +G DL+ R+QPLRVV+EED+L+LNLASSD QDID+LQ R+E+LAY+G GADLRGSG TR VA+RL EG +KRRSF++FSEA+SLF QQ +M + +S F ++E RR+F A++ HE HGAI LT VD GGG QE+ G GAA +L+IHVNPS+FAD VRRVVDVR A Q + V + +EA VRS LL L++QHKRF+K GEVSK+YLKFLW RDM L + SQEA PLEMSE D+ V+V SLL +RFMYRVRDG AF+ DR+VVASCL NKAGP VD KILELK G AI+S+ LKLV HAVPPGLV R L+
Sbjct: 178 QMFLTPGALFVLVVDMFTYEVGQSKEDALEQWLEILQARVPGSIMLLVGTHTDLFKANAAECTRRTDSFKEGRSYCSTSSNNSYLSPWPTDVDDIMTRMRYECDSAKDRAEAELGEGHTTDLKGNPRYQPLRVVLEEDLLALNLASSDWQDIDLLQHRLEYLAYNG-----------------------------GADLRGSGSTREAVAQRL-REGNPKKRRSFVRFSEAVSLFAAQQEGSMLSWLSNSFLRDNEPRRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVAPRQQAKVEEAMEACPLVRSSLLTLTDQHKRFIKTGEVSKDYLKFLWLRDMDLREASQEAPPLEMSEADVEVMVSSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGPDVDPGKILELKTGNAIYSQKLKLVRVHAVPPGLVPRLLS 620
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE) HSP 1 Score: 340 bits (872), Expect = 1.180e-94 Identity = 226/464 (48.71%), Postives = 294/464 (63.36%), Query Frame = 1
Query: 1054 QLFLTPCALFILVVDMSAYS-DKHSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRD-----VDDFI-NRNRSECASAKAYAECESSKGQPDLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGESEKRRSFIKFSEALSLFVE---QQTMFTRISKFFRHEHERRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAELQ*SMVVQEIEASSSVR---SVLLPLSEQHKRFVKAGEVSKEYLKFLWR-RDMKLGQGSQE-AQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 2400
Q+FLTP ALF+LVVDM AYS D HSREDAL QWLDIL RVPGSVVLL+GTHSDSF + +C +R F + +FI R EC +A + +G +QD RR++PLRVV+ +++L+LNL+ S G L+E IE +AY + + F SV + VPEP+L AVATLEAVRRG LRGSGG AEVARRL + + F+ F EALS F+E ++ MF + RVF AI+LHE GAILLT D GGG E++A+ E +LVIH+NP+ FAD +RR+VDVR L + QE A R + + LS+QH RF AGE+++ Y++FLW+ RD++LG S A PLEMSE+DI IV SLL +RFM+RVR +D ++V SCL + G +D K++EL+ G AI SR L+ VGAH+VPPGL+ R LA
Sbjct: 126 QMFLTPGALFVLVVDMFAYSEDGHSREDALEQWLDILQARVPGSVVLLMGTHSDSFDSPA-ECSKRVDCFVKGELLPLYKNFIMKRIGDECKAA-------ADRGHAGVQDNRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYGVHDGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGG-----KATEGARVFLAAIKLHEVQGAILLTRAD-GGGEMEDMAS-------EEHLVIHMNPAWFADLIRRIVDVRL--LDPAQARQEKVADLIKRQPPASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQN-----EDHYIVPSCLPDHVGCDMDPKKLMELEVGGAIFSRRLEFVGAHSVPPGLIPRLLA 561
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE) HSP 1 Score: 335 bits (859), Expect = 2.970e-91 Identity = 229/462 (49.57%), Postives = 289/462 (62.55%), Query Frame = 1
Query: 1054 QLFLTPCALFILVVDMSAYS-DKHSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRDVDDFINRNRSECASAKAYAECESSKGQPD-----LQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGES-EKRRSFIKFSEALSLFVE---QQTMFTRISKFFRHEHERRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAELQ*SMVVQEIEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWR-RDMKLGQGSQE--AQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 2400
Q+FLTP ALF+LVVD+ AYS D HSREDAL QWLDIL RVPGSVVLLVGTHSD F + +RD+ D + R EC SA+ A ES+ G D +QD RR+QPLR+V+ +++L+LNL S G LQE E +AY + + F SV S VPEP+L AVATLEAVRRGA LRGSGG AEV RRL +GE ++ + FI F EALSLF+E ++++F + + F AI LHE GAIL+T D GGG +E++ + E +LVIHVNP+ FAD +RR+VDVR + + E+ S SV LS+QH RF AGEVSK Y+KFLW+ RD++LG S A P EMSE+ I +V SLL +RFM+RVR +D ++V SCL + G VDA K+L L G AI SR L+L G VPPGL+ R LA
Sbjct: 298 QMFLTPGALFVLVVDIFAYSEDGHSREDALEQWLDILQARVPGSVVLLVGTHSDMFDSPA-------DCSKRDIMDRVGR---ECKSARERARQESA-GNSDREYAGVQDSRRYQPLRIVVVDELLALNLTPSGGVTTAQLQEHFEGVAYGVHDGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRL--DGEKLDEGQPFILFPEALSLFLEVAGEKSLFGGNAT-----EGEQAFLAAITLHERQGAILVTRAD-GGGEKEDMKPAS-----EQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEKLAEVIKRQSPASVA-ELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHN-----KDHYIVPSCLPDHVGCTVDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLA 729
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5JXU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU4_9PHAE) HSP 1 Score: 205 bits (522), Expect = 9.970e-54 Identity = 122/220 (55.45%), Postives = 146/220 (66.36%), Query Frame = 1
Query: 1741 RHEHERRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAELQ*SMVVQEIEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWRRDMKLGQGSQEAQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 2400
R + RR+F AI+ ETHGAILLT VD GA +L+IHVN S+FAD ++ V + +EA SVR +LL L++QHKRFVKAGEVSK+YLKFLW RDM+LGQ SQEA LEMSE D+ V+V S L +R +YRVRDG AF+ DR VVASCL NKAGP+VD ILEL+ AI+ + LKLV AHAVPPGLV R LA
Sbjct: 20 RDDEPRRIFLAAIKSQETHGAILLTGVD-------------GA-----DLIIHVNLSRFADLLK--------------VKEAMEACPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASQEAPRLEMSEADVEVMVDSFLDLRLVYRVRDGQHAFVPDRNVVASCLPNKAGPEVDPGNILELETASAIYLQKLKLVVAHAVPPGLVPRELA 207
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI) HSP 1 Score: 209 bits (531), Expect = 7.180e-51 Identity = 129/305 (42.30%), Postives = 166/305 (54.43%), Query Frame = 3
Query: 2745 SLREDVAFIRWPILRLVCVLPAPENEK----ELDRSFEAWSAKLKEWSAGGKIAGRGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSAKVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVETMASVAGENLERERPADLLQHAGAHRQGIPGVLAAPAVRSPIEQKSPRHAAVTSTMAVEPRITTSYTTKAASRACSSALAQSTNSVSVYWQRPAPLQGFAYE-LTDIMKDFEMDG-RRGSSPFRSFDPTMKPVDRHGLGEEWARVTNDTAHQFKS 3641
SL +VAF+ WPI L+CVLPA E+ E DRSFE WS L++ + G GRG+ATQKLR+FFLC D+SLAECGP GQ Y+ LL WAKKAK A++GL LA I K+C GLA+P+ +E LG AGG LS V ++L S VE MA+VAGE LE PA+ + HAGA R +E++ R RP P+QGFAY+ L ++++ F++D ++G SP SFD TM+ VDR G G EWA V Q+ S
Sbjct: 874 SLARNVAFLLWPIPSLMCVLPARESGAKPLDERDRSFEEWSTVLQKRCSEGNKMGRGVATQKLRLFFLCPLDMSLAECGPDGQGYQVTELLSWAKKAKPLAELGLALASIAVKVCTGLAMPAADIEAVLGTNAGGVLSEFVEEALTSSVEAMATVAGERLEDGSPAERVHHAGACR---------------LEREKMR-------------------------------------------RPTPVQGFAYDQLKEVIRSFDVDETQKGKSPVPSFDKTMQLVDRGGRGVEWAWVRRRNVDQYVS 1120
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5K561_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K561_9PHAE) HSP 1 Score: 183 bits (465), Expect = 1.110e-47 Identity = 121/291 (41.58%), Postives = 145/291 (49.83%), Query Frame = 3
Query: 2388 AVSGPAPGRIKECRKR*VCFNFKNHLALLYELQHGDGDAWIECHVRGGVHDESARSVLKDVGDQLHELVTDRKYGFPGLGLIRSE-EETVFASQLECEVLAERFAIVLKDQINVKFRMDRSLREDVAFIRWPILRLVCVLPAPENE----KELDRSFEAWSAKLKEWSAGGKIAGRGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSAKVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVETMASVAGENLERERPADLLQH 3245
A G GR KEC KR + K HL LL EL+ G +WIEC +RG + DES VLKD Q+HEL +D KYGFPGLGL E ET F + + L ER +L+DQ NV RWPIL CVLP PE++ +E++RSFE WS L+ GK +G AT+KL +FFLC D SLAECGP GQ E+ F E G GGA STLV +SL SG E +AS A E L+ P LQH
Sbjct: 57 AWCGRGEGRYKECCKRGLLLEIKKHLVLLIELRSTHGASWIECDMRGNLFDESPGKVLKDKDVQIHELFSDNKYGFPGLGLSYDEVSETDFDLDGDDKALVERIKSILRDQTNV---------------RWPIL--ACVLPTPESDVKPLEEINRSFEGWSTVLRSCCRDGKKQRKGFATRKLWMFFLCPVDRSLAECGPGGQG-----------------------CEVDF-------------EATPGTRPGGAFSTLVEESLDSGGEALASSAEERLDGGWPKGPLQH 294
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI) HSP 1 Score: 172 bits (436), Expect = 1.820e-39 Identity = 115/322 (35.71%), Postives = 149/322 (46.27%), Query Frame = 3
Query: 2745 SLREDVAFIRWPILRLVCVLPAPENE-KELDRSFEAWSAKLKEWSAGGKIAG-------------------RGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSAKVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVETMASVAGENLERER---PADLLQHAGAHRQGIPGVLAAPAVRSPIEQKSPRHAAVTSTMAVEPRITTSYTTKAASRACSSALAQSTNSVSVYWQRPAPLQGFAYE-LTDIMKDFEMDG-RRGSSPFRSFDPTMKPVDRHGLGEEWARVTNDTAHQF 3635
+ +VA +RWPI R VCVLPA + E DRSFE WS LKEW A A RG+ T++LR+FFLC QD SLAECGP GQ YE K L W +KA +AK+GL LA I K+C GLA+ ++ E A G +S V D+L +G+E S AG L+R + P++ L HAG G+ ++ PL+GF Y+ L +++K FE+D +R S + SFD TM VDR G G EWA V N QF
Sbjct: 878 GVAREVAILRWPIPRFVCVLPARDTRLSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAVSTDTFEAAFGTSED--MSAFVEDALSAGIEGTTSKAGNRLDRLQNSGPSERLPHAGVRGDGMQTLI-------------------------------------------------------------PLEGFDYDKLKEVIKSFEVDRTQRDGSRYPSFDTTMNIVDRRGHGVEWAWVRNRNIDQF 1136
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5JXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK6_9PHAE) HSP 1 Score: 114 bits (285), Expect = 5.730e-23 Identity = 70/172 (40.70%), Postives = 97/172 (56.40%), Query Frame = 3
Query: 2745 SLREDVAFIRWPILRLVCVLPAPEN-EKELDRSFEAWSAKLKEWSAGGKIAGRGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSAKVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVETMASVAGENLERERPADLLQHAGAH 3257
S+ ++VAF+RWPI RLV +L AP++ E L AK GR + T+KLR+FF + SLA CGP G LL WAKKAK +AKVGL +A I K+CIGLA+P L A G G ++ +V ++ S +++M S AG +E + L+HAG +
Sbjct: 225 SIAQNVAFMRWPIPRLVWLLLAPDSGEPALTAEQRCNQAK-----------GRRLVTRKLRLFFRYSHHYSLAVCGPGGA--RVTELLNWAKKAKSAAKVGLAVASIALKVCIGLAIPRMDLNAAFGASTGDVVTGVVEEAATSSIDSMTSAAGGRIESGGQTERLEHAGVN 383 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig18.149.3 >prot_P-littoralis_Contig18.149.3 ID=prot_P-littoralis_Contig18.149.3|Name=mRNA_P-littoralis_Contig18.149.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=316bp MLPLFTLPRCTQLFLTPCALFILVVDMSAYSDKHSREDALHQWLDILPFRback to top mRNA from alignment at P-littoralis_Contig18:688152..697265- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig18.149.3 ID=mRNA_P-littoralis_Contig18.149.3|Name=mRNA_P-littoralis_Contig18.149.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=9114bp|location=Sequence derived from alignment at P-littoralis_Contig18:688152..697265- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig18:688152..697265- >mRNA_P-littoralis_Contig18.149.3 ID=mRNA_P-littoralis_Contig18.149.3|Name=mRNA_P-littoralis_Contig18.149.3|organism=Pylaiella littoralis U1_48|type=CDS|length=948bp|location=Sequence derived from alignment at P-littoralis_Contig18:688152..697265- (Pylaiella littoralis U1_48)back to top |