mRNA_P-littoralis_Contig18.149.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig18.149.3
Unique NamemRNA_P-littoralis_Contig18.149.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 533 bits (1374), Expect = 3.710e-160
Identity = 289/453 (63.80%), Postives = 355/453 (78.37%), Query Frame = 1
Query: 1054 QLFLTPCALFILVVDMSAYSDKHSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRDVDDFINRNRSECASAKAYAECESSKGQP-DLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGESEKRRSFIKFSEALSLFVEQQ-TMFTRISKFFRHEHE-RRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAELQ*SMVVQE-IEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWRRDMKLGQGSQEAQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 2400
            Q+FLTP ALF+LVVDM  Y++  SREDAL QWL+IL  RVPGSVVLLVGTH+D F  ++ +C  RT  F++DV++ + R R EC SAK   E E  +G   DL+   R+QPLRVV++E++L+L+L SSDGQDID+LQ+R+EHLAY+G++ + F SV SVVPEPYLPA+ATLEAVRRGADLRGSG TR  VA+RLGE G+ +KRRSF++FSEA+SLF +Q+ +MF+R+S  FR   E RR+F  A++ HE HGAILLT VD GGG QE+   G GAA    +L+IHVNPS+FAD VRRVVDVR  + +    V+E +EA +SVR +LL L++QHKRFVKAGEVSK+YLKFLW RDM LG+ SQEA PLEMSE D+ V+VGSLL +RFMYRVRDG  AF+ DR+VVASCL NKAG  VD  KILELK G AI+S+ LKLVGAHAVPPGLV R LA
Sbjct:  433 QMFLTPGALFVLVVDMFTYTEGQSREDALEQWLEILQARVPGSVVLLVGTHTDLFAENAAECTRRTDRFKKDVEEIMTRLRCECDSAKDRVETELGEGHTTDLKGNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGYDGYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGE-GDPKKRRSFVRFSEAVSLFTKQKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQAKVEEAMEACTSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEASQEAPPLEMSEADVEVMVGSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGLNVDPGKILELKMGSAIYSQKLKLVGAHAVPPGLVPRLLA 884          
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE)

HSP 1 Score: 499 bits (1284), Expect = 1.920e-150
Identity = 277/474 (58.44%), Postives = 344/474 (72.57%), Query Frame = 1
Query: 1054 QLFLTPCALFILVVDMSAYSDKHSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRDVDDFINRNRSECASAKAYAECESSKGQPDLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGESEKRRSFIKFSEALSLFVEQQ--TMFTRISK----------------------FFRHEHERRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAE-LQ*SMVVQEIEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWRRDMKLGQGSQEAQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 2400
            Q+FLT  ALF+LVVDM AY++ HS EDA+ QWLDIL  RVPG+V+LLVGTH+D F  ++ +C +RT  F++DV+  + R   +C SAK  AE E  +  PDL+    ++PLRVV+EED+L+L+L SSD +DI +LQ R+EHLAY+G++ + FSSV SVVPEPYLP +ATLEAVR GADLRGSGGTR  V +RL  EG+  KRRSF++FSEA+SL  +QQ  +  +R+S                       F R +  RR+F  AI+ HE +GAILLT VD GG  QE+   G GAA    +L+IHVNPS+FAD VRRVVDVR  +  Q   V Q + A  SVR +LL L++QHKRFVKAGEVSK+YLKFLW RDM+LGQ S EA PLEMSE D+ V+VGSLL +RFMYRVRDG DAF+ DR+VVASCL NKAGP+VD  K+LELK G A++S+ LKLVGAHAVPPGLV R LA
Sbjct:  138 QMFLTQGALFVLVVDMFAYAEGHSPEDAVEQWLDILQARVPGAVLLLVGTHTDLFEDNATECTKRTDRFKKDVEKIMKRISCQCDSAKNLAETELGERHPDLEGNPHYRPLRVVLEEDLLTLDLTSSDWEDIGLLQRRLEHLAYNGYDGYSFSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRL-REGDPRKRRSFVRFSEAVSLHRKQQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAACPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASPEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAGPEVDPGKMLELKAGSAVYSQKLKLVGAHAVPPGLVPRLLA 610          
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE)

HSP 1 Score: 443 bits (1139), Expect = 2.150e-130
Identity = 261/473 (55.18%), Postives = 317/473 (67.02%), Query Frame = 1
Query: 1054 QLFLTPCALFILVVDMSAYSDKHSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQR-------------------DVDDFINRNRSECASAKAYAECESSKGQP-DLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGESEKRRSFIKFSEALSLFVEQQ--TMFTRISKFFRHEHE-RRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRW-AELQ*SMVVQEIEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWRRDMKLGQGSQEAQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 2400
            Q+FLTP ALF+LVVDM  Y    S+EDAL QWL+IL  RVPGS++LLVGTH+D F  ++ +C  RT +F+                    DVDD + R R EC SAK  AE E  +G   DL+   R+QPLRVV+EED+L+LNLASSD QDID+LQ R+E+LAY+G                             GADLRGSG TR  VA+RL  EG  +KRRSF++FSEA+SLF  QQ  +M + +S  F  ++E RR+F  A++ HE HGAI LT VD GGG QE+   G GAA    +L+IHVNPS+FAD VRRVVDVR  A  Q + V + +EA   VRS LL L++QHKRF+K GEVSK+YLKFLW RDM L + SQEA PLEMSE D+ V+V SLL +RFMYRVRDG  AF+ DR+VVASCL NKAGP VD  KILELK G AI+S+ LKLV  HAVPPGLV R L+
Sbjct:  178 QMFLTPGALFVLVVDMFTYEVGQSKEDALEQWLEILQARVPGSIMLLVGTHTDLFKANAAECTRRTDSFKEGRSYCSTSSNNSYLSPWPTDVDDIMTRMRYECDSAKDRAEAELGEGHTTDLKGNPRYQPLRVVLEEDLLALNLASSDWQDIDLLQHRLEYLAYNG-----------------------------GADLRGSGSTREAVAQRL-REGNPKKRRSFVRFSEAVSLFAAQQEGSMLSWLSNSFLRDNEPRRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVAPRQQAKVEEAMEACPLVRSSLLTLTDQHKRFIKTGEVSKDYLKFLWLRDMDLREASQEAPPLEMSEADVEVMVSSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGPDVDPGKILELKTGNAIYSQKLKLVRVHAVPPGLVPRLLS 620          
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 1.180e-94
Identity = 226/464 (48.71%), Postives = 294/464 (63.36%), Query Frame = 1
Query: 1054 QLFLTPCALFILVVDMSAYS-DKHSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRD-----VDDFI-NRNRSECASAKAYAECESSKGQPDLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGESEKRRSFIKFSEALSLFVE---QQTMFTRISKFFRHEHERRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAELQ*SMVVQEIEASSSVR---SVLLPLSEQHKRFVKAGEVSKEYLKFLWR-RDMKLGQGSQE-AQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 2400
            Q+FLTP ALF+LVVDM AYS D HSREDAL QWLDIL  RVPGSVVLL+GTHSDSF   + +C +R   F +        +FI  R   EC +A       + +G   +QD RR++PLRVV+ +++L+LNL+ S G     L+E IE +AY   + + F SV + VPEP+L AVATLEAVRRG  LRGSGG  AEVARRL    +  +   F+ F EALS F+E   ++ MF       +     RVF  AI+LHE  GAILLT  D GGG  E++A+       E +LVIH+NP+ FAD +RR+VDVR   L  +   QE  A    R   + +  LS+QH RF  AGE+++ Y++FLW+ RD++LG  S   A PLEMSE+DI  IV SLL +RFM+RVR       +D ++V SCL +  G  +D  K++EL+ G AI SR L+ VGAH+VPPGL+ R LA
Sbjct:  126 QMFLTPGALFVLVVDMFAYSEDGHSREDALEQWLDILQARVPGSVVLLMGTHSDSFDSPA-ECSKRVDCFVKGELLPLYKNFIMKRIGDECKAA-------ADRGHAGVQDNRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYGVHDGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMFGG-----KATEGARVFLAAIKLHEVQGAILLTRAD-GGGEMEDMAS-------EEHLVIHMNPAWFADLIRRIVDVRL--LDPAQARQEKVADLIKRQPPASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQN-----EDHYIVPSCLPDHVGCDMDPKKLMELEVGGAIFSRRLEFVGAHSVPPGLIPRLLA 561          
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 2.970e-91
Identity = 229/462 (49.57%), Postives = 289/462 (62.55%), Query Frame = 1
Query: 1054 QLFLTPCALFILVVDMSAYS-DKHSREDALHQWLDILPFRVPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRDVDDFINRNRSECASAKAYAECESSKGQPD-----LQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERIEHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEVARRLGEEGES-EKRRSFIKFSEALSLFVE---QQTMFTRISKFFRHEHERRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAELQ*SMVVQEIEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWR-RDMKLGQGSQE--AQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 2400
            Q+FLTP ALF+LVVD+ AYS D HSREDAL QWLDIL  RVPGSVVLLVGTHSD F   +          +RD+ D + R   EC SA+  A  ES+ G  D     +QD RR+QPLR+V+ +++L+LNL  S G     LQE  E +AY   + + F SV S VPEP+L AVATLEAVRRGA LRGSGG  AEV RRL  +GE  ++ + FI F EALSLF+E   ++++F   +         + F  AI LHE  GAIL+T  D GGG +E++   +     E +LVIHVNP+ FAD +RR+VDVR  +      + E+    S  SV   LS+QH RF  AGEVSK Y+KFLW+ RD++LG  S    A P EMSE+ I  +V SLL +RFM+RVR       +D ++V SCL +  G  VDA K+L L  G AI SR L+L G   VPPGL+ R LA
Sbjct:  298 QMFLTPGALFVLVVDIFAYSEDGHSREDALEQWLDILQARVPGSVVLLVGTHSDMFDSPA-------DCSKRDIMDRVGR---ECKSARERARQESA-GNSDREYAGVQDSRRYQPLRIVVVDELLALNLTPSGGVTTAQLQEHFEGVAYGVHDGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRL--DGEKLDEGQPFILFPEALSLFLEVAGEKSLFGGNAT-----EGEQAFLAAITLHERQGAILVTRAD-GGGEKEDMKPAS-----EQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEKLAEVIKRQSPASVA-ELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHN-----KDHYIVPSCLPDHVGCTVDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLA 729          
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5JXU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU4_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 9.970e-54
Identity = 122/220 (55.45%), Postives = 146/220 (66.36%), Query Frame = 1
Query: 1741 RHEHERRVFHDAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFADAVRRVVDVRWAELQ*SMVVQEIEASSSVRSVLLPLSEQHKRFVKAGEVSKEYLKFLWRRDMKLGQGSQEAQPLEMSEDDIRVIVGSLLHIRFMYRVRDGPDAFLQDRFVVASCLANKAGPQVDAAKILELKPGCAIHSRVLKLVGAHAVPPGLVTRFLA 2400
            R +  RR+F  AI+  ETHGAILLT VD             GA     +L+IHVN S+FAD ++              V + +EA  SVR +LL L++QHKRFVKAGEVSK+YLKFLW RDM+LGQ SQEA  LEMSE D+ V+V S L +R +YRVRDG  AF+ DR VVASCL NKAGP+VD   ILEL+   AI+ + LKLV AHAVPPGLV R LA
Sbjct:   20 RDDEPRRIFLAAIKSQETHGAILLTGVD-------------GA-----DLIIHVNLSRFADLLK--------------VKEAMEACPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASQEAPRLEMSEADVEVMVDSFLDLRLVYRVRDGQHAFVPDRNVVASCLPNKAGPEVDPGNILELETASAIYLQKLKLVVAHAVPPGLVPRELA 207          
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: D8LLG1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG1_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 7.180e-51
Identity = 129/305 (42.30%), Postives = 166/305 (54.43%), Query Frame = 3
Query: 2745 SLREDVAFIRWPILRLVCVLPAPENEK----ELDRSFEAWSAKLKEWSAGGKIAGRGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSAKVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVETMASVAGENLERERPADLLQHAGAHRQGIPGVLAAPAVRSPIEQKSPRHAAVTSTMAVEPRITTSYTTKAASRACSSALAQSTNSVSVYWQRPAPLQGFAYE-LTDIMKDFEMDG-RRGSSPFRSFDPTMKPVDRHGLGEEWARVTNDTAHQFKS 3641
            SL  +VAF+ WPI  L+CVLPA E+      E DRSFE WS  L++  + G   GRG+ATQKLR+FFLC  D+SLAECGP GQ Y+   LL WAKKAK  A++GL LA I  K+C GLA+P+  +E  LG  AGG LS  V ++L S VE MA+VAGE LE   PA+ + HAGA R               +E++  R                                           RP P+QGFAY+ L ++++ F++D  ++G SP  SFD TM+ VDR G G EWA V      Q+ S
Sbjct:  874 SLARNVAFLLWPIPSLMCVLPARESGAKPLDERDRSFEEWSTVLQKRCSEGNKMGRGVATQKLRLFFLCPLDMSLAECGPDGQGYQVTELLSWAKKAKPLAELGLALASIAVKVCTGLAMPAADIEAVLGTNAGGVLSEFVEEALTSSVEAMATVAGERLEDGSPAERVHHAGACR---------------LEREKMR-------------------------------------------RPTPVQGFAYDQLKEVIRSFDVDETQKGKSPVPSFDKTMQLVDRGGRGVEWAWVRRRNVDQYVS 1120          
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5K561_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K561_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 1.110e-47
Identity = 121/291 (41.58%), Postives = 145/291 (49.83%), Query Frame = 3
Query: 2388 AVSGPAPGRIKECRKR*VCFNFKNHLALLYELQHGDGDAWIECHVRGGVHDESARSVLKDVGDQLHELVTDRKYGFPGLGLIRSE-EETVFASQLECEVLAERFAIVLKDQINVKFRMDRSLREDVAFIRWPILRLVCVLPAPENE----KELDRSFEAWSAKLKEWSAGGKIAGRGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSAKVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVETMASVAGENLERERPADLLQH 3245
            A  G   GR KEC KR +    K HL LL EL+   G +WIEC +RG + DES   VLKD   Q+HEL +D KYGFPGLGL   E  ET F    + + L ER   +L+DQ NV               RWPIL   CVLP PE++    +E++RSFE WS  L+     GK   +G AT+KL +FFLC  D SLAECGP GQ                         E+ F             E   G   GGA STLV +SL SG E +AS A E L+   P   LQH
Sbjct:   57 AWCGRGEGRYKECCKRGLLLEIKKHLVLLIELRSTHGASWIECDMRGNLFDESPGKVLKDKDVQIHELFSDNKYGFPGLGLSYDEVSETDFDLDGDDKALVERIKSILRDQTNV---------------RWPIL--ACVLPTPESDVKPLEEINRSFEGWSTVLRSCCRDGKKQRKGFATRKLWMFFLCPVDRSLAECGPGGQG-----------------------CEVDF-------------EATPGTRPGGAFSTLVEESLDSGGEALASSAEERLDGGWPKGPLQH 294          
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: D7FUH6_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH6_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 1.820e-39
Identity = 115/322 (35.71%), Postives = 149/322 (46.27%), Query Frame = 3
Query: 2745 SLREDVAFIRWPILRLVCVLPAPENE-KELDRSFEAWSAKLKEWSAGGKIAG-------------------RGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSAKVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVETMASVAGENLERER---PADLLQHAGAHRQGIPGVLAAPAVRSPIEQKSPRHAAVTSTMAVEPRITTSYTTKAASRACSSALAQSTNSVSVYWQRPAPLQGFAYE-LTDIMKDFEMDG-RRGSSPFRSFDPTMKPVDRHGLGEEWARVTNDTAHQF 3635
             +  +VA +RWPI R VCVLPA +    E DRSFE WS  LKEW A    A                    RG+ T++LR+FFLC QD SLAECGP GQ YE K  L W +KA  +AK+GL LA I  K+C GLA+ ++  E A G      +S  V D+L +G+E   S AG  L+R +   P++ L HAG    G+  ++                                                             PL+GF Y+ L +++K FE+D  +R  S + SFD TM  VDR G G EWA V N    QF
Sbjct:  878 GVAREVAILRWPIPRFVCVLPARDTRLSESDRSFEKWSTALKEWCASKSPAKDAKNPNRKTSILGLNKPQLRGLVTRELRLFFLCGQDKSLAECGPDGQGYEVKEFLDWVRKAAPAAKIGLALASIALKVCTGLAVSTDTFEAAFGTSED--MSAFVEDALSAGIEGTTSKAGNRLDRLQNSGPSERLPHAGVRGDGMQTLI-------------------------------------------------------------PLEGFDYDKLKEVIKSFEVDRTQRDGSRYPSFDTTMNIVDRRGHGVEWAWVRNRNIDQF 1136          
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Match: A0A6H5JXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXK6_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 5.730e-23
Identity = 70/172 (40.70%), Postives = 97/172 (56.40%), Query Frame = 3
Query: 2745 SLREDVAFIRWPILRLVCVLPAPEN-EKELDRSFEAWSAKLKEWSAGGKIAGRGIATQKLRVFFLCAQDLSLAECGPKGQWYEAKVLLKWAKKAKRSAKVGLFLAEIVFKLCIGLALPSNMLETALGIEAGGALSTLVTDSLGSGVETMASVAGENLERERPADLLQHAGAH 3257
            S+ ++VAF+RWPI RLV +L AP++ E  L        AK           GR + T+KLR+FF  +   SLA CGP G       LL WAKKAK +AKVGL +A I  K+CIGLA+P   L  A G   G  ++ +V ++  S +++M S AG  +E     + L+HAG +
Sbjct:  225 SIAQNVAFMRWPIPRLVWLLLAPDSGEPALTAEQRCNQAK-----------GRRLVTRKLRLFFRYSHHYSLAVCGPGGA--RVTELLNWAKKAKSAAKVGLAVASIALKVCIGLAIPRMDLNAAFGASTGDVVTGVVEEAATSSIDSMTSAAGGRIESGGQTERLEHAGVN 383          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.149.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FU35_ECTSI3.710e-16063.80LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K9A9_9PHAE1.920e-15058.44Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L4_9PHAE2.150e-13055.18Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JSN1_9PHAE1.180e-9448.71Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPJ1_9PHAE2.970e-9149.57Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JXU4_9PHAE9.970e-5455.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLG1_ECTSI7.180e-5142.30LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K561_9PHAE1.110e-4741.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUH6_ECTSI1.820e-3935.71LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5JXK6_9PHAE5.730e-2340.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:688152..697265 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FU35
PFAMsLRR_8,Roc
Model size5406
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons5
Evalue4.78e-107
EggNOG OGsCOG4886@1|root,KOG0619@2759|Eukaryota
Descriptionregulation of response to stimulus
Cds size948
COG categoryU
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.149.3prot_P-littoralis_Contig18.149.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig18 694270..696245 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789866.9286418-UTR-P-littoralis_Contig18:688151..6902821680789866.9286418-UTR-P-littoralis_Contig18:688151..690282Pylaiella littoralis U1_48UTRP-littoralis_Contig18 688152..690282 -
1680789866.940176-UTR-P-littoralis_Contig18:690396..6906811680789866.940176-UTR-P-littoralis_Contig18:690396..690681Pylaiella littoralis U1_48UTRP-littoralis_Contig18 690397..690681 -
1680789866.952741-UTR-P-littoralis_Contig18:692132..6923491680789866.952741-UTR-P-littoralis_Contig18:692132..692349Pylaiella littoralis U1_48UTRP-littoralis_Contig18 692133..692349 -
1680789866.9632466-UTR-P-littoralis_Contig18:693464..6942691680789866.9632466-UTR-P-littoralis_Contig18:693464..694269Pylaiella littoralis U1_48UTRP-littoralis_Contig18 693465..694269 -
1680789867.0021052-UTR-P-littoralis_Contig18:696245..6972651680789867.0021052-UTR-P-littoralis_Contig18:696245..697265Pylaiella littoralis U1_48UTRP-littoralis_Contig18 696246..697265 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789866.9817283-CDS-P-littoralis_Contig18:694269..6949701680789866.9817283-CDS-P-littoralis_Contig18:694269..694970Pylaiella littoralis U1_48CDSP-littoralis_Contig18 694270..694970 -
1680789866.9930093-CDS-P-littoralis_Contig18:695998..6962451680789866.9930093-CDS-P-littoralis_Contig18:695998..696245Pylaiella littoralis U1_48CDSP-littoralis_Contig18 695999..696245 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig18.149.3

>prot_P-littoralis_Contig18.149.3 ID=prot_P-littoralis_Contig18.149.3|Name=mRNA_P-littoralis_Contig18.149.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=316bp
MLPLFTLPRCTQLFLTPCALFILVVDMSAYSDKHSREDALHQWLDILPFR
VPGSVVLLVGTHSDSFGGDSVKCRERTGAFQRDVDDFINRNRSECASAKA
YAECESSKGQPDLQDKRRFQPLRVVMEEDMLSLNLASSDGQDIDMLQERI
EHLAYSGFEDHLFSSVMSVVPEPYLPAVATLEAVRRGADLRGSGGTRAEV
ARRLGEEGESEKRRSFIKFSEALSLFVEQQTMFTRISKFFRHEHERRVFH
DAIQLHETHGAILLTAVDEGGGGQEELAAGTGAATYEGNLVIHVNPSQFA
DAVRRVVDVRWAELQ*
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mRNA from alignment at P-littoralis_Contig18:688152..697265-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig18.149.3 ID=mRNA_P-littoralis_Contig18.149.3|Name=mRNA_P-littoralis_Contig18.149.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=9114bp|location=Sequence derived from alignment at P-littoralis_Contig18:688152..697265- (Pylaiella littoralis U1_48)
GTTCAGTAGGCAGCCAAGGAAGGATTTGTATAATTGTCTCATTCTTAGGA TCCCGGCAGTAGACTAGAGTCGATTCCGCAATACGTCACTACAATCATCC ACGTGACCTCGACCTGTTTGTGCGCGTCAGTGTTTCCTAGAGCTTTGGCT GAAGGACTTGCTGCTCGAAAAGCCAGTAGCCTACCCAGCGATGTTAAATT AACATATAGGATAAAGTAAACTTTCGGCTAAGTTTAGGGTTAGGGTTAGG GTTAGGGTCAGCCATCACACACCCTCTACACCAAAGCAACACCCAACATC AGCAGCGTACAGCAGTAGCAGCAGCAGCACGACAGCAGTAAAAGCAAGCC GCGTGTGAGGAGCCAGGGACCAGCAACCGCGACGGGCGGCGGGATTAGAC TTGGCCAAAGGTATACTTCATCCTATATGTTTAACATCCTGGCGTAGGCG GTCCCGAAAAGCGCATGGCATTGTCAAGACCAGGAGAAAACCCCTGGAAA GAGCCACCAGCGAATGTCATGGCGTTGGGTATGGAGCGCGCGGCTTTGTT TCTTAGGGACTTGGACGACTACGGCAGGACATTGTCTTACCGCCTCAAGG TTGTATTGGTTAGATTAGGAGAAGCAGGCAAGACCACCATTGCCGCCTGG CTCGAAGATCGATTTGGTTTCAGTTGTCCGGGACCATAGGAGCGTACGGT AGGTGTGGAGATAGGGCGCATCAAGCTCGGGTCTGATCCAGCTACAGGAA GCGGGCCAAACGTCGAGCTAGACGCGAGCATCTGGGATTTTGCTGGCCAG AGAGCATACCACGACACGCACCAGGTGGGAGGTTTCATACAGCTAAATGT GAGACCAACATTTTCGCCGCCCATTGGTGATGGAGCAAGCCTACTACTGC TCTCGATGACTTACTGAAGGGGTGGGAGATGAGTGTTATTTGGAATGCGT TAGGTTGTCTCCTGTTCGCGGTCTCCTTTTCACACTAACGTTGTCATATA CGCATACACATGCATACGTAATGCTACCGCTCTTCACGCTGCCCCGCTGT ACCCAGTTATTCCTCACCCCATGCGCTCTTTTTATCCTGGTCGTGGACAT GTCCGCGTATTCGGACAAGCACTCCCGGGAAGATGCGCTCCACCAGTGGC TTGACATCCTGCCTTTCAGAGTCCCCGGTTCCGTGGTTTTGCTCGTGGGG ACGCACAGCGATTCGTTTGGAGGGGATTCCGTCAAGTGCAGGGAGCGAAC GGGTGCCTTCCAGAGAGGTGGGTCGTGGGGGCGAACCGTTGCGATCTACG TTGCGTAAAATGATTAATGGCTTTGTCGTTTACCATAAATCAACAACCCA AAAATTTGGTGTCATAGCCAGTGAGGGTGCACTTCACTGGGTGACTCACA CTTTCGGCAGTTTTCATAAAAGGCCCATGGGCGGCCCATGGGCACATTAT AAAACTGCCCATGGGCGTGCTCACAGGCGTTCCACGAGAAATGCTCATGG ACATGCTCATGGGCGGCCCGCGAGCGGCCCATGGGTGGCCCATGAGCGTA TTTTTCTCTGAATTTTGGGCGGTCCATGAGCGTGAGTAAGGTTTGAGATC GCTGCGGCCTTGGTAAGGTCCTATTTTTCTCGTCAGTGTTGGATCACAGT AAGCCGCGGCAAACGTTTTTAAGCCTAACCCTAACCCTGACCCAACCCCA ATCAACCCTGGATGGGCCTTGGTGAGGTTCTAGGTCGCTGCGGCCTTCCT AAAGTGCTAGGTTACCGTGCGGGGGGCTGGGTTAGGCCGTGGCGGCGGAC TCGCCGTGGGGTTCCCATGAGGTGCCCATGGGCATGCTCACGGAAGGCTC ATGGGCGGCTCATGGGCTTTTTATGAAAACTCCCAGTGTGGGAGATTGAC TTCACTTGCTTGACGTGGCTTGATCAAGCTCGGCTCCACACAGCCACTCT GCTTGAAACACACTTGTGTAAAATGTGGCAAGGATAAAAGCTGTCGCTGG TCCCGCGTGAACACGGGCTGAGCGGTGACCGATTGTTGACTTAATATTAC TCGGGTGTTGATGCGCCGGGGGCTCATCCTTTGAGACAAGCAAGTGGCGC CTTCGGATTTTGTACTTGTTGGGTTCATCGGCTTTCGCCCCTGTTGATTT TTCCTGCCGATGGTAACACGTTCATTTTCTGCACACCTCTCGTGGCGAAA TGCTGCGGCCGGTTTGTATCCAAGAGCCCGGCTGCATAACGGCTTCCAAT GATCCTGCGTTTGCCAACGTTACCTTTTTTTCCGGGGAAAAACAGATGTG GATGATTTCATCAACCGGAATCGCTCCGAATGCGCCTCAGCCAAAGCATA TGCAGAATGTGAATCGAGCAAGGGGCAGCCGGACTTGCAGGACAAGCGCC GCTTCCAACCCCTTCGCGTTGTCATGGAAGAGGATATGCTTTCTCTTAAC CTCGCGTCCTCGGACGGGCAAGATATTGATATGCTTCAGGAGCGCATCGA GCACCTTGCCTACAGCGGCTTCGAAGACCACTTGTTCTCTTCCGTAATGA GCGTCGTACCTGAACCTTATTTGCCAGCCGTCGCAACGCTGGAAGCAGTT CGTCGTGGAGCGGATTTGCGTGGTTCGGGCGGTACACGAGCCGAGGTAGC GAGAAGGCTTGGGGAGGAGGGGGAGTCCGAGAAAAGACGCTCGTTCATAA AGTTCTCAGAGGCCCTGTCGCTTTTCGTCGAACAGCAAACCATGTTCACA CGGATTTCCAAGTTTTTTCGCCACGAACACGAACGACGTGTGTTTCACGA CGCCATCCAGTTACACGAGACTCACGGTGCGATTCTTCTGACCGCGGTTG ATGAAGGCGGGGGTGGTCAAGAGGAACTTGCAGCCGGCACTGGTGCTGCG ACATACGAAGGTAACCTCGTCATCCACGTGAATCCGTCCCAGTTTGCTGA TGCGGTTCGCCGAGTTGTCGACGTTCGGTGGGCAGAGCTGCAGTAGTCAA TGGTAGTCCAAGAGATTGAGGCATCGTCGTCGGTAAGGTCGGTGCTTTTA CCCCTCTCAGAGCAGCACAAGAGATTCGTCAAGGCTGGAGAGGTGAGCAA GGAATATCTCAAATTTCTGTGGCGCCGAGACATGAAGCTGGGTCAGGGAA GCCAAGAAGCGCAACCTCTCGAAATGTCGGAAGACGACATTCGCGTGATT GTGGGCAGCTTGCTTCACATCCGGTTCATGTATCGGGTACGGGATGGTCC CGATGCCTTCTTGCAGGACCGCTTCGTTGTCGCAAGCTGTCTTGCGAACA AAGCCGGGCCTCAGGTGGACGCAGCAAAAATTTTGGAGCTGAAGCCCGGA TGCGCGATACACTCGCGGGTGCTGAAGCTTGTTGGTGCGCATGCCGTGCC CCCTGGACTGGTAACGCGGTTTCTGGCCCCGCGCCAGGGCGCATCAAGGA ATGCCGGAAGCGATGAGTTTGTTTCAACTTCAAGAACCACTTGGCGTTGC TGTATGAACTCCAGCACGGTGATGGGGACGCTTGGATTGAGTGCCACGTA AGGGGGGGTGTTCACGACGAGAGTGCGAGGAGCGTCTTGAAGGACGTCGG CGACCAGCTTCACGAGCTGGTCACCGACCGCAAGTACGGGTTCCCCGGCC TTGGCCTCATCCGTAGCGAAGAGGAAACGGTTTTCGCCTCGCAGCTTGAG TGCGAGGTCTTAGCGGAGCGGTTCGCGATTGTCTTGAAGGATCAGATAAA CGTCAAGTTCAGAATGGATAGGAGCTTGAGAGAGGACGTGGCCTTCATAC GGTGAGCGAATCGAACAAAGAGGTATTGATTTATCGCTTTGATTAATCCC GGTATTACTTTTTGCGCCCCATATTCGTTTCAGGGTTCAAAATTCTAGCC CACAAGTCACCCGACGAATACACCATCATTCCCTCAAACCAGTCTACGTA CGCTTGGTCGCCTTTCCGCTGTGTTGTGGTTAGGTTGCAACACTCCTGTT GTACCGTACTACAGCAAAGGCATTTCCCGCAACATGGATAGTCTGCATTT GTACGAGCCCACGACTCGAAAGCAAGAGGGGGCGTTTTTTTTTTACCATC GCATTTTCCGGTCAGTCCATTTAGTTAGTTGGCGTCGAGGGCGTTGCACC ACGTACGTTGAAGATTTGCAAGGTGCCGTGCGACATTAATTTTCTCGTTT TCCTCCTGTGTGGGCCGTGTCATTGGTTTGTATTAAAGGACGGGCTGTGA AATCTTGAAATATATTGCACGCCAGGCCCGACCACTCCGCCTCCTTTGTC GAACCTTGTGCAACGCGGAGGGGCTCCGCTGCGTGAAATCCAATGTAGGA AATTGAGTACCCTGCTCTTCCAACCGTTAGCAAATTGAAAGTACTCCGCA TCCCCGCACCCAAATCAACGGTTTGCACCACCCCATACAGAGTGAAGAAA GCGAGAGCCGTGTCACAGCTCTATTCATTGGCTACCTTATTTCTGGCGTC GAATAGCAGCAAAGGTGGTCGTGTGCGCATGGCATTTGGTGCTGTATAGT GCGGCGGTGCAGGCAAAAAACGCCAACACACGCGGTCGATCACCCTCATA GCAGGAATTTATGCTTGACTACTGTAGCGCTGCCGCGATACGGGCGGCGA CGTCCCCAATCTCCACCAGCTAGGTGGTCGTGATCACGCCCTCTCCCCAC CGGTCATGCGTGAGAAATTGAGCAGGGAACGGATTGCTCCTCAAGTCATA TTTTGAGCAACAACTTGATGTTTCGGATTCTCGTTCCATCTCACGGCGGC ATCTACGTGGCTGGTTTGATTAAACAGAAACGTCTTCGAGGAAAAGCATG CTGCCTGAGCTTGCGTTCCTTCGCTGATATATCAATGGAACTTTTTTTTG TCTTTGGGATGTGCAGGTGGCCGATCCTTCGCCTAGTGTGCGTGCTGCCC GCCCCCGAGAACGAGAAGGAGTTAGATAGATCGTTCGAGGCATGGTCGGC CAAACTGAAGGAGTGGTCCGCCGGCGGGAAAATAGCAGGGAGAGGGATTG CAACGCAAAAGCTGCGTGTGTTCTTCCTCTGCGCGCAGGATCTGAGCCTC GCCGAGTGCGGGCCCAAAGGGCAATGGTACGAGGTGAGTACTATCGAACA AAGCAAAAGTTGCGTGTCCCCCTTGCTTGGAATAACAATTTTCTTGTTGT CCGGTATCCTTCCGTCATTTATAACTCAAACGGCAGCAATTTATTTTCGG GATCACCGAGAGCGCTCCATTCCACAGGTTCGAGTGTTCACAGCCCTGCA TTTGGTAATTTTCAGGTGGCCATAAAGAACGAAGGAGGGAAGAAAAATAA TCGGGAAAAGTTTTGTTACTTGTTAGGGTGGCGGGTTTAGAACCCAGCGC ATGGCACTGTCGGCAAGGTCAGCCTGTGTTCCGCTCAACCACCGAAAATA ATTGAAATGAACGGCGAATTTATCGCATGTGCAAAGTGGAATTGACTGTT TTCTGTGTCCACTGATTGATTTCGTGGCACTCGAGGAGAGAGGTCAACTA GCTTCTGTCTACCAAGTGTTTTAACTTCGAAGTTTCAAGTTTGTGTCCGT CTCTTTACTCGACTTCTTAAATCAAAAGAAAAACGGTGCCGTCAAGAATT TTACGTCGGTAGGGTCGTGTCTTCCGGTTTTGGAAATCCAGCAATTTTTG TCGAGAACAAATTCTAGCCGAAACACGTCACTCGGAAACAGCTCGTTTCT CGCGGTTGGTGAGCTTGATATCACAGCTTGTGGGGAAGAGGAGGTGGCTC TCCTCATTTCACTTTGGAGGCACAGGTCCCGATTCCGTAAGGAATACTGA CCGTAGAGCACACATCGAGAGCTCCCACCATCTCTAGGTTCCAGGCACTG CTGCGCTGGTCGCTGATCAGTGTCGGTCGCTCGTCAGGAGACCAAAAGGT TTTTTTTCGCACGCCTGACAAGCGACCAGAGCCGCAGTGCTTTTATCCTA GGTATGGCGGGAGCCCTTGCTGAGCGCGACGTTCAGAATTTGTGTCGCAG CAGTTCTGCTCTGACACAATATCCCAAACATTAAAAATCCAAGTCGATAA TTTTCCTCGGTTTCCACATGGATCTTCCTCCAAAGTCCAACAAGCCGACA GCCAGGATGTCAGATTATTTCGCTCGACTTGGATTTTGGTTTTGGAATTT TGGTGGTTTCCCAAACCGCAAGGAGCCATTCGAGATTTTCTTGTTGGTTT AGTTCGTTTTTCTCTGAATTTCCCAACCGCGAGAAATGGCCTGAGCGTGG AAGTCTGTCCAAATGCTCTTTTGAGCGCTGAAACAACTGTCTTGGTAAAC ATCCCGCACCTGGGATCAGTGACGGCGCATCCTGCCGATATGGTCATATG TTGTGCTCTCCCCCCGTATTTCCTCCTTGCCGTCATTGTAGAGAAAAGTT TGATGTCTCATGATGAGTGACTTTGAAGTGGCAGCTGGAAAGAATGCTTC GTTTGCCTCGTGTCTGCGGAAATGAACCGATCTTACTCGTGAAAGCTCGA CTTACACTCACACCTTAACTCCATCATTGATCAGGCGAAGGTGTTGTTGA AGTGGGCGAAGAAAGCGAAGCGGTCGGCGAAGGTGGGATTGTTCCTCGCC GAGATCGTGTTCAAACTGTGCATCGGCCTGGCACTTCCTTCTAACATGTT GGAGACCGCACTTGGGATAGAAGCCGGCGGTGCCTTATCCACGTTGGTCA CGGACTCGCTAGGCTCGGGCGTCGAGACGATGGCGAGCGTCGCCGGGGAG AACCTGGAAAGGGAAAGGCCGGCGGACCTACTCCAGCACGCTGGCGCGCA CAGGCAGGGGATACCAGGGGTGAGGTGATCTTCGGCGTTTTCTGTTGCTC TTTAAACCTGTTGGAAACCGTCCCGAAAATAACCACTACTGTGAAGGTCT TTGACGGGAATCCTGCCTGTCCGTATCCCTCAGGTGCTAGCCGCACCTGC CGTGCGTAGCCCAATTGAGCAGAAAAGCCCAAGGCATGCTGCTGTCACGT CGACCATGGCTGTCGAGCCCAGAATCACAACGTCCTATACCACCAAGGCC GCGTCCCGCGCATGTTCGTCCGCTCTTGCTCAATCTACGAATTCGGTGTC CGTCTATTGGCAGCGACCTGCCCCGCTGCAGGGGTTCGCCTACGAACTCA CGGACATCATGAAGGATTTCGAGATGGATGGAAGGCGGGGCAGTTCTCCC TTCCGCAGTTTCGACCCTACAATGAAGCCCGTTGACAGGCATGGGCTAGG AGAAGAGTGGGCACGGGTTACGAATGACACCGCTCATCAGTTCAAGAGTA AATGAGCGAAGCCCAGCGTCGGCGAGTTCTTTTGACTAGGGCTCAAATTG ACGCCAACGGCGACTATTACTCCCTCCTCTATACAAATATGGTATCTACT GTTTTGATACCACCGTACCCGCCACGGCTCATAGGAGCGTTCGCAGAGAA AGCGTCCTCTATTACTCGTCCCTGAGATTGATTTTTATTTAGGATTGGCG TCTATAAGGAGATTTGGCGTGGGGCGCGGTCGATCAGAGTGGTTGTGATG CCTCCGTTTATGTTTACACGAAAACCGGCTGTTTGCATCACAGAGAGGGG AAGCCCAGATAGCGAAGGACGCCTGTCGTGGCTGACGACGTGGCTGAAAC GCCATCTTGGGGTGTTTGACCCTGGCCGAAGCGTGGTTGTCCACCCTGTA GATACGCGATGACGGCAGGGGAGAAGACCAAGAGGTGGGCATTGAGCTCA CGATGCTTGCTGTCATTTTCGCCGTGGTTGTGACTGGGTTATTGTGTGTT GGGCGTCAAGTGGTTGCGTCTACGTACGGATCGTGGCCCCCTAGACCGCT CGCCCACCGCGGTTAGGCGCTTGCTGCCAACGGTACGTAGGCGCAGGCGG TGTTGCTTCGATGGTGGTGGTCATCACCGGACTATGTTGGCGATTTGGTC GTAAATACAGCAAGTAGTTCGGATGTGGGGATGGCTTGCTTTCTTTTATC GCGCTTTTGTTGACCTGTCTGGGTCCTTTGTCTTTTTTTTTTTTTTTTAC CTTTCTTGAGGTGGTTAGCTCGTTTCCACGGAAGGCGTCCGCATCGGCTG GATCAGTACGGATGGTGAAAGGAAGGTTTTGCGGAGAGATCGAACGGTTT TTAATGTGATGGCAACAATAACAACAAAACAAAGTGCAGCCGAAATATGG ACGGACCGAACGTTGAGCCACCCTGTTAGTTTTCCCATGTTTGAACGCCC ATCGCTTGGTGTATGGTTTGCACCTGCTTGCATAGTATGGCGTCGGTTTG CCATGTCGTGGTTGGTGTTTGAGGTTCATGTGTTCAATTGATTCCCTCCG CTCCGCCCGGCACCAATGAATCTAAGAGGCAGCTGTGCAAGGTGACTTTT TACAATTTTTGACAGACTGGTGTGAATTTGCGCCTAGAACCTGTTCCCAT AAAAATTGAAGTTTATCGTGATGGTACTGTATGTGGAAGAAAACCGTCCT CTCTACGATGACGAGGTGTTGGACGAATGCATGTGGGCTACGGCATTTCC CGCTCGAACTCGAGTTCGTTGACGTCTTTTGCGGGGATTGGCAGGGAACA CATCGATCGGTGGTCTTGATCTGTGGTTGATCGCAAAAAATGTGTATCAC CCACCGTACCTCCCTGTAGTTATCCTCGGCCATTTGTGCTTTTGGGTAAA AGCCGTAAGACAACACATTTATTTTATTTTATTTTTTTGGTCCTCCGGCG GACATGGGAAAAAAAGTAACGCACATAACAATACACTTCTTCCCTGGTGA GCGCACGGCACGACCACGCAGAGATGTGAGATAGTACGCGGGCTGTTGGG GGAGACGTACTTTTTGTATTGCCCTGTTACCTCATGACACTTGATTTGCA CAGTGTCGGAGTTGCTCTCGAAGCTCCCGTATCCTGGTTCACGCGAAGTC CCCAAAATCATTTTCTTTCCCATTTGACAAGGTGTTCGGTGTGTTTGTGT GTTGTGTTCATGCATACACGCCACGTCTTTAGGATTGATAGCGATTCAAG GGACGACTTTTGAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig18:688152..697265-

>mRNA_P-littoralis_Contig18.149.3 ID=mRNA_P-littoralis_Contig18.149.3|Name=mRNA_P-littoralis_Contig18.149.3|organism=Pylaiella littoralis U1_48|type=CDS|length=948bp|location=Sequence derived from alignment at P-littoralis_Contig18:688152..697265- (Pylaiella littoralis U1_48)
ATGCTACCGCTCTTCACGCTGCCCCGCTGTACCCAGTTATTCCTCACCCC
ATGCGCTCTTTTTATCCTGGTCGTGGACATGTCCGCGTATTCGGACAAGC
ACTCCCGGGAAGATGCGCTCCACCAGTGGCTTGACATCCTGCCTTTCAGA
GTCCCCGGTTCCGTGGTTTTGCTCGTGGGGACGCACAGCGATTCGTTTGG
AGGGGATTCCGTCAAGTGCAGGGAGCGAACGGGTGCCTTCCAGAGAGATG
TGGATGATTTCATCAACCGGAATCGCTCCGAATGCGCCTCAGCCAAAGCA
TATGCAGAATGTGAATCGAGCAAGGGGCAGCCGGACTTGCAGGACAAGCG
CCGCTTCCAACCCCTTCGCGTTGTCATGGAAGAGGATATGCTTTCTCTTA
ACCTCGCGTCCTCGGACGGGCAAGATATTGATATGCTTCAGGAGCGCATC
GAGCACCTTGCCTACAGCGGCTTCGAAGACCACTTGTTCTCTTCCGTAAT
GAGCGTCGTACCTGAACCTTATTTGCCAGCCGTCGCAACGCTGGAAGCAG
TTCGTCGTGGAGCGGATTTGCGTGGTTCGGGCGGTACACGAGCCGAGGTA
GCGAGAAGGCTTGGGGAGGAGGGGGAGTCCGAGAAAAGACGCTCGTTCAT
AAAGTTCTCAGAGGCCCTGTCGCTTTTCGTCGAACAGCAAACCATGTTCA
CACGGATTTCCAAGTTTTTTCGCCACGAACACGAACGACGTGTGTTTCAC
GACGCCATCCAGTTACACGAGACTCACGGTGCGATTCTTCTGACCGCGGT
TGATGAAGGCGGGGGTGGTCAAGAGGAACTTGCAGCCGGCACTGGTGCTG
CGACATACGAAGGTAACCTCGTCATCCACGTGAATCCGTCCCAGTTTGCT
GATGCGGTTCGCCGAGTTGTCGACGTTCGGTGGGCAGAGCTGCAGTAG
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