mRNA_P-littoralis_Contig18.89.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: D8LRR6_ECTSI (DUF4149 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR6_ECTSI) HSP 1 Score: 340 bits (872), Expect = 1.950e-110 Identity = 177/239 (74.06%), Postives = 202/239 (84.52%), Query Frame = 2
Query: 161 STHAFLPPLRVPPRAVVARGGGRRGKVTVMETKPRAGPSGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKGTLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIFIIRGFPLGTRAGVTLIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASMLP 877
ST+AF P +RVP RA VA GG RR +T METK AGPSG+Q+L+KWDPSAQQ FIQPA HN N VRVAAILTAA LASKG ++VPGNL+K VH++A WMG+T WTTF AGITMMRNLPRQTFGKLQSKLFP YFQ NF +ILAI+IIRG PL TRAGVTL+VSL +T LNLVLLEPKSTS+M +RYKLED+ +KDS+EYK+LG FG FHG+SSFANLG LIGS VYAWELAS++P
Sbjct: 16 STYAFCP-MRVPHRAAVAPGGIRR-MMTAMETKSEAGPSGVQSLSKWDPSAQQAFIQPAIHNKNPVRVAAILTAAGLASKGAMLVPGNLAKMVHMVALNAWMGSTLWTTFFAGITMMRNLPRQTFGKLQSKLFPLYFQFNFVSILAIYIIRGCPLRTRAGVTLLVSLFSTLLNLVLLEPKSTSIMLERYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELASVIP 252
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: A0A6H5KHA9_9PHAE (DUF4149 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA9_9PHAE) HSP 1 Score: 199 bits (505), Expect = 1.560e-57 Identity = 97/126 (76.98%), Postives = 109/126 (86.51%), Query Frame = 2
Query: 248 METKPRAGPSGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKGTLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIFIIRGFPL 625
ME KP AGPSG+Q+L+KWDPSAQQ FIQPA HN N VRVAAILTAA LASKG ++VPGNL+K VH++A WMG+T WTTF AGITM RNLPRQTFGKLQSKLFP YFQLNF++ILAI+IIRG PL
Sbjct: 1 MEVKPEAGPSGVQSLSKWDPSAQQAFIQPAIHNKNPVRVAAILTAAGLASKGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPLYFQLNFASILAIYIIRGCPL 126
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: A0A0G4F9E7_VITBC (DUF4149 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F9E7_VITBC) HSP 1 Score: 191 bits (484), Expect = 2.140e-52 Identity = 109/215 (50.70%), Postives = 137/215 (63.72%), Query Frame = 2
Query: 242 TVMETKPRAGPSGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKGTLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIFIIRGFP-LGTRAGVT-LIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASMLPA 880
T+ E K AG L +WDP Q ++ PA HN N VR+ A+L+ LAS T+ V L+ FVH+LAYA W+G+ +TTFVAGITM RNLPR+TFG+LQSKLFP YFQL ++ + G L RA + L V+L T NL +LEPKST +MFKRY++ED +KD EYK L FG FHGLSS NL L G V + W LAS++ A
Sbjct: 87 TLEEKKQMAG------LERWDP---QVWVAPAVHNRNSVRLLALLSTLLLASGSTVFVSKQLTLFVHLLAYATWLGSVIYTTFVAGITMFRNLPRKTFGRLQSKLFPLYFQLCTGMLIVLLTTGGASVLPNRAMMANLAVALVMTLANLFVLEPKSTEIMFKRYEMEDQGRKDDPEYKALAKGFGKFHGLSSLTNLIALCGGVAHGWTLASLIGA 292
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: A0A835YZR0_9STRA (DUF4149 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZR0_9STRA) HSP 1 Score: 175 bits (444), Expect = 9.600e-46 Identity = 99/214 (46.26%), Postives = 135/214 (63.08%), Query Frame = 2
Query: 266 AGPSGLQNLNKWDPSAQQG---FIQPAAHNNNGVRVAAILTAAALASKGTLM-VPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIFI-IRGFP----LGTRAGVTLIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASMLPA 880
+GP G+ L+ WDPS++Q ++QPA HN N VRVAA++ A LA++G+L + FVH+L++ + +G+T +TTF+AGI M +NLPRQTFGKLQSKLFPAYF LN LA+ + + G + A V L +L NL +LEP+ST VM RY+LE+ + EY +L FG HG+SS NLG L G+ YAW LA + A
Sbjct: 85 SGPKGVAGLSAWDPSSRQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLARVRDA 298
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: W7TXS6_9STRA (DUF4149 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXS6_9STRA) HSP 1 Score: 154 bits (388), Expect = 5.360e-39 Identity = 98/251 (39.04%), Postives = 145/251 (57.77%), Query Frame = 2
Query: 131 IPIALLTALSSTHAFLPPLRVPPRAVVARGGGRRGKVTVMETKPRAGPSGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKGTLM-VPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIFIIRGFPLGTRAGVT--LIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASML 874
IPI A +S+ + L VPP + + +G G +V + G G D + Q +I+PA HN VR+ A+L ++A K + M +P + + ++H+L + G+ +TTFV G+ M+++LPRQTFG+LQSKLFP YF + A LA+ ++ G LG A L SL A +N + LEP ST VMF+RY LE N+++ EYK+L +FG HG SS NL T++G V+A+ L+ ML
Sbjct: 26 IPIGARLARTSSSSTLKRWPVPPSSNLVQGAGVVSQV--LRASDAKGAEG-------DSAGVQPWIEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALA-LALQLLTGKTLGLPAKAMRWLAASLAAALINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLSLML 266
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: A0A7S3RBJ6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RBJ6_9SPIT) HSP 1 Score: 149 bits (375), Expect = 4.780e-38 Identity = 83/186 (44.62%), Postives = 117/186 (62.90%), Query Frame = 2
Query: 317 QGFIQPAAHNNNGVRVAAILTAAALASKGTLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIF-IIRGFPLG---TRAGVTLIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWEL 862
Q ++ PA N R A+I TA ALA+ G+ + ++ F H++++ G+ +TTF AGITM +NLPRQTFG+LQSKLFP YF+L+ +++ + +R G TR +L T LNL LEP+ST VMF RY LE+ +++S+EYK KFG HG+SS ANLG LIG + ++W L
Sbjct: 3 QAWVPPAIWNTPAFRAASIATALALAAAGSRQLGARMAIFAHLISFGSLFGSMIYTTFFAGITMFKNLPRQTFGRLQSKLFPIYFKLHAASLCVMLGTLRAVASGGSLTRPVYACGSALLFTLLNLFYLEPQSTKVMFTRYDLENEGKQESDEYKVAAKKFGPLHGMSSLANLGALIGVIAHSWWL 188
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: B8BU99_THAPS (DUF4149 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BU99_THAPS) HSP 1 Score: 146 bits (369), Expect = 9.500e-38 Identity = 80/149 (53.69%), Postives = 102/149 (68.46%), Query Frame = 2
Query: 437 VHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAI-LAIFIIRGFP--LGTRAGVTLIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASML 874
+H+L+++ W GT +TTFVAGITM +NLPR+ FG LQSKLFP YFQL S I + I + P L + V+L +S AT LNL+ LEP ST VMF RY LED+ ++DS+EY KL FG +HG+SS ANL LIG +V+ LAS L
Sbjct: 2 LHLLSFSTWFGTVVYTTFVAGITMFKNLPRRVFGSLQSKLFPLYFQLCTSMIGIQILTLTSMPDILSKVSEVSLGISFAATLLNLLYLEPTSTQVMFDRYDLEDDGKRDSDEYGKLAKSFGAYHGMSSLANLVALIGGIVHGVRLASGL 150
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: A0A7S1D7W6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7W6_CYCTE) HSP 1 Score: 150 bits (379), Expect = 1.320e-37 Identity = 102/258 (39.53%), Postives = 142/258 (55.04%), Query Frame = 2
Query: 122 MKFIPIALLTALSSTHAFLPPLRVPPRAVVARGGGRRGKVTVMETKPRAGPSGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKG---TLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQL-NFSAILAIFIIRGFP--LGTRAGVTLIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQ---KDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELAS 868
+ + +++L + S LP R + R R+ K+ T P + +L +WDP+ + HN+N R AAI+ A S +L + + HILA+ W GT +TTFVAGITM RNLPRQTFGKLQSKLFP YF L S IL + + P L ++A L L T LN + LEP ST+VMF RY++E+++ K+S EYKKL + FG +HG+SS ANL L + V+ + +AS
Sbjct: 21 LTLLTVSVLATIVSCFQPLPSSRT--HLLSPRHNERQSKMKQAATAPPKSGKVVNSLPEWDPT---NWTPARLHNSNIFRAAAIVLALVWVSGSPTKSLYMSRKAAATTHILAFGTWFGTMLYTTFVAGITMYRNLPRQTFGKLQSKLFPKYFVLCTISVILQLATVSFMPSALASKATKALGTGLVMTLLNQLWLEPTSTTVMFSRYEIENSDDPQAKESAEYKKLASDFGKYHGMSSLANLVALCAAFVHGFYIAS 273
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: A0A0G4HBS1_9ALVE (DUF4149 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HBS1_9ALVE) HSP 1 Score: 151 bits (382), Expect = 2.060e-37 Identity = 92/214 (42.99%), Postives = 124/214 (57.94%), Query Frame = 2
Query: 275 SGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKGTLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIFIIR---GFPLGTRAGVT----LIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSE-------EYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASML 874
S Q ++ + S ++ PA HN GVRV IL+A L L G S F H+L ++++G F+TTFV GIT+ +NLP Q FG+LQSKLFP YFQL ++ + R G P G + V+ LIVSL T LNL LEP +T+ MF+RY++E N KD+ EYKKL F HG+SSF NL L+ VYAW+L++ +
Sbjct: 58 SAAQTGSEVESSPSPKWVTPAVHNKMGVRVLTILSALVLIGGKDLFKVGTTSIFTHLLGVSLYLGVNFYTTFVLGITLFKNLPVQMFGRLQSKLFPMYFQLLSGCLVVLLSSRKAVGLPAGILSDVSSRNLLIVSLVCTLLNLFYLEPATTTNMFRRYEIE--NMKDATDRSANAGEYKKLRKSFAFLHGMSSFVNLLALVAGTVYAWDLSTSI 269
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: I0YK71_COCSC (DUF4149 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YK71_COCSC) HSP 1 Score: 148 bits (374), Expect = 2.400e-37 Identity = 86/204 (42.16%), Postives = 131/204 (64.22%), Query Frame = 2
Query: 287 NLNKWDPSAQQ---GFIQPAAHNNNGVRVAAILTAAALASKGTLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSA-ILAIFIIR-GFPLGTRA--GVTLIVSLCATFLNLVLLEPKSTSVMFKRYKLEDN-NQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASML 874
N N +PS ++ ++P+A N N VR+A + A +A++ T +P N++ F+H++A+ +W+G+ WTTF+AGITM +NLPRQTFGKLQ+KLFP YF + +A +L I + G P G +TL V+ + N + +EP +T++MF+RY LE+ +KDS + K+L +FG FHG+SS NL L + + W LAS L
Sbjct: 31 NENGANPSGEELSGPMLEPSAFNKNWVRLAWVSAALVVAARSTEFLPVNVAVFIHLMAWGLWLGSNIWTTFIAGITMFKNLPRQTFGKLQAKLFPQYFAVAIAAGVLQIGTLAFGVPGGIARTQSITLGVAFVTSLANWLYVEPVATNLMFERYNLENAPGEKDSAKIKQLYKQFGKFHGISSLLNLVALGAVISHGWWLASKL 234 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig18.89.2 >prot_P-littoralis_Contig18.89.2 ID=prot_P-littoralis_Contig18.89.2|Name=mRNA_P-littoralis_Contig18.89.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=254bp MKFIPIALLTALSSTHAFLPPLRVPPRAVVARGGGRRGKVTVMETKPRAGback to top mRNA from alignment at P-littoralis_Contig18:422800..426562- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig18.89.2 ID=mRNA_P-littoralis_Contig18.89.2|Name=mRNA_P-littoralis_Contig18.89.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3763bp|location=Sequence derived from alignment at P-littoralis_Contig18:422800..426562- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig18:422800..426562- >mRNA_P-littoralis_Contig18.89.2 ID=mRNA_P-littoralis_Contig18.89.2|Name=mRNA_P-littoralis_Contig18.89.2|organism=Pylaiella littoralis U1_48|type=CDS|length=762bp|location=Sequence derived from alignment at P-littoralis_Contig18:422800..426562- (Pylaiella littoralis U1_48)back to top |