mRNA_P-littoralis_Contig18.89.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig18.89.2
Unique NamemRNA_P-littoralis_Contig18.89.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: D8LRR6_ECTSI (DUF4149 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRR6_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 1.950e-110
Identity = 177/239 (74.06%), Postives = 202/239 (84.52%), Query Frame = 2
Query:  161 STHAFLPPLRVPPRAVVARGGGRRGKVTVMETKPRAGPSGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKGTLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIFIIRGFPLGTRAGVTLIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASMLP 877
            ST+AF P +RVP RA VA GG RR  +T METK  AGPSG+Q+L+KWDPSAQQ FIQPA HN N VRVAAILTAA LASKG ++VPGNL+K VH++A   WMG+T WTTF AGITMMRNLPRQTFGKLQSKLFP YFQ NF +ILAI+IIRG PL TRAGVTL+VSL +T LNLVLLEPKSTS+M +RYKLED+ +KDS+EYK+LG  FG FHG+SSFANLG LIGS VYAWELAS++P
Sbjct:   16 STYAFCP-MRVPHRAAVAPGGIRR-MMTAMETKSEAGPSGVQSLSKWDPSAQQAFIQPAIHNKNPVRVAAILTAAGLASKGAMLVPGNLAKMVHMVALNAWMGSTLWTTFFAGITMMRNLPRQTFGKLQSKLFPLYFQFNFVSILAIYIIRGCPLRTRAGVTLLVSLFSTLLNLVLLEPKSTSIMLERYKLEDDKKKDSDEYKELGKTFGKFHGMSSFANLGALIGSFVYAWELASVIP 252          
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: A0A6H5KHA9_9PHAE (DUF4149 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA9_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 1.560e-57
Identity = 97/126 (76.98%), Postives = 109/126 (86.51%), Query Frame = 2
Query:  248 METKPRAGPSGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKGTLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIFIIRGFPL 625
            ME KP AGPSG+Q+L+KWDPSAQQ FIQPA HN N VRVAAILTAA LASKG ++VPGNL+K VH++A   WMG+T WTTF AGITM RNLPRQTFGKLQSKLFP YFQLNF++ILAI+IIRG PL
Sbjct:    1 MEVKPEAGPSGVQSLSKWDPSAQQAFIQPAIHNKNPVRVAAILTAAGLASKGAMLVPGNLAKMVHVVALNAWMGSTLWTTFFAGITMFRNLPRQTFGKLQSKLFPLYFQLNFASILAIYIIRGCPL 126          
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: A0A0G4F9E7_VITBC (DUF4149 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F9E7_VITBC)

HSP 1 Score: 191 bits (484), Expect = 2.140e-52
Identity = 109/215 (50.70%), Postives = 137/215 (63.72%), Query Frame = 2
Query:  242 TVMETKPRAGPSGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKGTLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIFIIRGFP-LGTRAGVT-LIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASMLPA 880
            T+ E K  AG      L +WDP   Q ++ PA HN N VR+ A+L+   LAS  T+ V   L+ FVH+LAYA W+G+  +TTFVAGITM RNLPR+TFG+LQSKLFP YFQL    ++ +    G   L  RA +  L V+L  T  NL +LEPKST +MFKRY++ED  +KD  EYK L   FG FHGLSS  NL  L G V + W LAS++ A
Sbjct:   87 TLEEKKQMAG------LERWDP---QVWVAPAVHNRNSVRLLALLSTLLLASGSTVFVSKQLTLFVHLLAYATWLGSVIYTTFVAGITMFRNLPRKTFGRLQSKLFPLYFQLCTGMLIVLLTTGGASVLPNRAMMANLAVALVMTLANLFVLEPKSTEIMFKRYEMEDQGRKDDPEYKALAKGFGKFHGLSSLTNLIALCGGVAHGWTLASLIGA 292          
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: A0A835YZR0_9STRA (DUF4149 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZR0_9STRA)

HSP 1 Score: 175 bits (444), Expect = 9.600e-46
Identity = 99/214 (46.26%), Postives = 135/214 (63.08%), Query Frame = 2
Query:  266 AGPSGLQNLNKWDPSAQQG---FIQPAAHNNNGVRVAAILTAAALASKGTLM-VPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIFI-IRGFP----LGTRAGVTLIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASMLPA 880
            +GP G+  L+ WDPS++Q    ++QPA HN N VRVAA++ A  LA++G+L      +  FVH+L++ + +G+T +TTF+AGI M +NLPRQTFGKLQSKLFPAYF LN    LA+ + + G      +   A V L  +L     NL +LEP+ST VM  RY+LE+  +    EY +L   FG  HG+SS  NLG L G+  YAW LA +  A
Sbjct:   85 SGPKGVAGLSAWDPSSRQASAKWMQPAVHNANPVRVAALIAAVGLAARGSLASASAVMPAFVHVLSFGMLVGSTLYTTFIAGIIMFKNLPRQTFGKLQSKLFPAYFCLNSMCALAMLVTLHGLSSSGGVPADAAVPLAAALVCNLGNLFVLEPRSTGVMLARYELENRGEAKGAEYDRLSRAFGKLHGMSSLLNLGALGGACAYAWHLARVRDA 298          
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: W7TXS6_9STRA (DUF4149 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXS6_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.360e-39
Identity = 98/251 (39.04%), Postives = 145/251 (57.77%), Query Frame = 2
Query:  131 IPIALLTALSSTHAFLPPLRVPPRAVVARGGGRRGKVTVMETKPRAGPSGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKGTLM-VPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIFIIRGFPLGTRAGVT--LIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASML 874
            IPI    A +S+ + L    VPP + + +G G   +V  +      G  G       D +  Q +I+PA HN   VR+ A+L   ++A K + M +P + + ++H+L +    G+  +TTFV G+ M+++LPRQTFG+LQSKLFP YF  +  A LA+ ++ G  LG  A     L  SL A  +N + LEP ST VMF+RY LE  N+++  EYK+L  +FG  HG SS  NL T++G  V+A+ L+ ML
Sbjct:   26 IPIGARLARTSSSSTLKRWPVPPSSNLVQGAGVVSQV--LRASDAKGAEG-------DSAGVQPWIEPAFHNKLSVRILAVLAGISIAMKNSGMALPKSAATYIHLLMFGANFGSVMYTTFVLGLVMIKHLPRQTFGRLQSKLFPIYFAWSALA-LALQLLTGKTLGLPAKAMRWLAASLAAALINSLFLEPASTKVMFQRYALEKQNRREETEYKELAKRFGALHGASSLVNLVTVVGGFVHAYYLSLML 266          
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: A0A7S3RBJ6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RBJ6_9SPIT)

HSP 1 Score: 149 bits (375), Expect = 4.780e-38
Identity = 83/186 (44.62%), Postives = 117/186 (62.90%), Query Frame = 2
Query:  317 QGFIQPAAHNNNGVRVAAILTAAALASKGTLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIF-IIRGFPLG---TRAGVTLIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWEL 862
            Q ++ PA  N    R A+I TA ALA+ G+  +   ++ F H++++    G+  +TTF AGITM +NLPRQTFG+LQSKLFP YF+L+ +++  +   +R    G   TR       +L  T LNL  LEP+ST VMF RY LE+  +++S+EYK    KFG  HG+SS ANLG LIG + ++W L
Sbjct:    3 QAWVPPAIWNTPAFRAASIATALALAAAGSRQLGARMAIFAHLISFGSLFGSMIYTTFFAGITMFKNLPRQTFGRLQSKLFPIYFKLHAASLCVMLGTLRAVASGGSLTRPVYACGSALLFTLLNLFYLEPQSTKVMFTRYDLENEGKQESDEYKVAAKKFGPLHGMSSLANLGALIGVIAHSWWL 188          
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: B8BU99_THAPS (DUF4149 domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BU99_THAPS)

HSP 1 Score: 146 bits (369), Expect = 9.500e-38
Identity = 80/149 (53.69%), Postives = 102/149 (68.46%), Query Frame = 2
Query:  437 VHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAI-LAIFIIRGFP--LGTRAGVTLIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASML 874
            +H+L+++ W GT  +TTFVAGITM +NLPR+ FG LQSKLFP YFQL  S I + I  +   P  L   + V+L +S  AT LNL+ LEP ST VMF RY LED+ ++DS+EY KL   FG +HG+SS ANL  LIG +V+   LAS L
Sbjct:    2 LHLLSFSTWFGTVVYTTFVAGITMFKNLPRRVFGSLQSKLFPLYFQLCTSMIGIQILTLTSMPDILSKVSEVSLGISFAATLLNLLYLEPTSTQVMFDRYDLEDDGKRDSDEYGKLAKSFGAYHGMSSLANLVALIGGIVHGVRLASGL 150          
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: A0A7S1D7W6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7W6_CYCTE)

HSP 1 Score: 150 bits (379), Expect = 1.320e-37
Identity = 102/258 (39.53%), Postives = 142/258 (55.04%), Query Frame = 2
Query:  122 MKFIPIALLTALSSTHAFLPPLRVPPRAVVARGGGRRGKVTVMETKPRAGPSGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKG---TLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQL-NFSAILAIFIIRGFP--LGTRAGVTLIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQ---KDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELAS 868
            +  + +++L  + S    LP  R     +  R   R+ K+    T P      + +L +WDP+    +     HN+N  R AAI+ A    S     +L +    +   HILA+  W GT  +TTFVAGITM RNLPRQTFGKLQSKLFP YF L   S IL +  +   P  L ++A   L   L  T LN + LEP ST+VMF RY++E+++    K+S EYKKL + FG +HG+SS ANL  L  + V+ + +AS
Sbjct:   21 LTLLTVSVLATIVSCFQPLPSSRT--HLLSPRHNERQSKMKQAATAPPKSGKVVNSLPEWDPT---NWTPARLHNSNIFRAAAIVLALVWVSGSPTKSLYMSRKAAATTHILAFGTWFGTMLYTTFVAGITMYRNLPRQTFGKLQSKLFPKYFVLCTISVILQLATVSFMPSALASKATKALGTGLVMTLLNQLWLEPTSTTVMFSRYEIENSDDPQAKESAEYKKLASDFGKYHGMSSLANLVALCAAFVHGFYIAS 273          
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: A0A0G4HBS1_9ALVE (DUF4149 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HBS1_9ALVE)

HSP 1 Score: 151 bits (382), Expect = 2.060e-37
Identity = 92/214 (42.99%), Postives = 124/214 (57.94%), Query Frame = 2
Query:  275 SGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKGTLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSAILAIFIIR---GFPLGTRAGVT----LIVSLCATFLNLVLLEPKSTSVMFKRYKLEDNNQKDSE-------EYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASML 874
            S  Q  ++ + S    ++ PA HN  GVRV  IL+A  L     L   G  S F H+L  ++++G  F+TTFV GIT+ +NLP Q FG+LQSKLFP YFQL    ++ +   R   G P G  + V+    LIVSL  T LNL  LEP +T+ MF+RY++E  N KD+        EYKKL   F   HG+SSF NL  L+   VYAW+L++ +
Sbjct:   58 SAAQTGSEVESSPSPKWVTPAVHNKMGVRVLTILSALVLIGGKDLFKVGTTSIFTHLLGVSLYLGVNFYTTFVLGITLFKNLPVQMFGRLQSKLFPMYFQLLSGCLVVLLSSRKAVGLPAGILSDVSSRNLLIVSLVCTLLNLFYLEPATTTNMFRRYEIE--NMKDATDRSANAGEYKKLRKSFAFLHGMSSFVNLLALVAGTVYAWDLSTSI 269          
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Match: I0YK71_COCSC (DUF4149 domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YK71_COCSC)

HSP 1 Score: 148 bits (374), Expect = 2.400e-37
Identity = 86/204 (42.16%), Postives = 131/204 (64.22%), Query Frame = 2
Query:  287 NLNKWDPSAQQ---GFIQPAAHNNNGVRVAAILTAAALASKGTLMVPGNLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYFQLNFSA-ILAIFIIR-GFPLGTRA--GVTLIVSLCATFLNLVLLEPKSTSVMFKRYKLEDN-NQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASML 874
            N N  +PS ++     ++P+A N N VR+A +  A  +A++ T  +P N++ F+H++A+ +W+G+  WTTF+AGITM +NLPRQTFGKLQ+KLFP YF +  +A +L I  +  G P G      +TL V+   +  N + +EP +T++MF+RY LE+   +KDS + K+L  +FG FHG+SS  NL  L   + + W LAS L
Sbjct:   31 NENGANPSGEELSGPMLEPSAFNKNWVRLAWVSAALVVAARSTEFLPVNVAVFIHLMAWGLWLGSNIWTTFIAGITMFKNLPRQTFGKLQAKLFPQYFAVAIAAGVLQIGTLAFGVPGGIARTQSITLGVAFVTSLANWLYVEPVATNLMFERYNLENAPGEKDSAKIKQLYKQFGKFHGISSLLNLVALGAVISHGWWLASKL 234          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.89.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRR6_ECTSI1.950e-11074.06DUF4149 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KHA9_9PHAE1.560e-5776.98DUF4149 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A0G4F9E7_VITBC2.140e-5250.70DUF4149 domain-containing protein n=1 Tax=Vitrella... [more]
A0A835YZR0_9STRA9.600e-4646.26DUF4149 domain-containing protein n=1 Tax=Tribonem... [more]
W7TXS6_9STRA5.360e-3939.04DUF4149 domain-containing protein n=2 Tax=Monodops... [more]
A0A7S3RBJ6_9SPIT4.780e-3844.62Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
B8BU99_THAPS9.500e-3853.69DUF4149 domain-containing protein (Fragment) n=1 T... [more]
A0A7S1D7W6_CYCTE1.320e-3739.53Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A0G4HBS1_9ALVE2.060e-3742.99DUF4149 domain-containing protein n=1 Tax=Chromera... [more]
I0YK71_COCSC2.400e-3742.16DUF4149 domain-containing protein n=1 Tax=Coccomyx... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:422800..426562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRR6
Preferred nameTMEM205
PFAMsDUF4149
Model size1811
Max annot lvl2759|Eukaryota
KEGG koko:K07884
KEGG Pathwayko04972,map04972
Hectar predicted targeting categorysignal peptide
Exons7
Evalue1.6e-116
EggNOG OGsKOG2886@1|root,KOG2886@2759|Eukaryota
Ec32 ortholog descriptionDomain of unknown function DUF4149
Ec32 orthologEc-08_002150.1
DescriptionDomain of unknown function (DUF4149)
Cds size762
COG categoryS
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.89.2prot_P-littoralis_Contig18.89.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig18 423825..426441 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789863.6570303-UTR-P-littoralis_Contig18:422799..4230251680789863.6570303-UTR-P-littoralis_Contig18:422799..423025Pylaiella littoralis U1_48UTRP-littoralis_Contig18 422800..423025 -
1680789863.674206-UTR-P-littoralis_Contig18:423122..4238241680789863.674206-UTR-P-littoralis_Contig18:423122..423824Pylaiella littoralis U1_48UTRP-littoralis_Contig18 423123..423824 -
1680789863.7647665-UTR-P-littoralis_Contig18:426441..4265621680789863.7647665-UTR-P-littoralis_Contig18:426441..426562Pylaiella littoralis U1_48UTRP-littoralis_Contig18 426442..426562 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789863.6888158-CDS-P-littoralis_Contig18:423824..4239841680789863.6888158-CDS-P-littoralis_Contig18:423824..423984Pylaiella littoralis U1_48CDSP-littoralis_Contig18 423825..423984 -
1680789863.707854-CDS-P-littoralis_Contig18:424231..4243271680789863.707854-CDS-P-littoralis_Contig18:424231..424327Pylaiella littoralis U1_48CDSP-littoralis_Contig18 424232..424327 -
1680789863.721556-CDS-P-littoralis_Contig18:424504..4245841680789863.721556-CDS-P-littoralis_Contig18:424504..424584Pylaiella littoralis U1_48CDSP-littoralis_Contig18 424505..424584 -
1680789863.7307434-CDS-P-littoralis_Contig18:425142..4252561680789863.7307434-CDS-P-littoralis_Contig18:425142..425256Pylaiella littoralis U1_48CDSP-littoralis_Contig18 425143..425256 -
1680789863.7404437-CDS-P-littoralis_Contig18:425565..4257601680789863.7404437-CDS-P-littoralis_Contig18:425565..425760Pylaiella littoralis U1_48CDSP-littoralis_Contig18 425566..425760 -
1680789863.753787-CDS-P-littoralis_Contig18:426324..4264411680789863.753787-CDS-P-littoralis_Contig18:426324..426441Pylaiella littoralis U1_48CDSP-littoralis_Contig18 426325..426441 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig18.89.2

>prot_P-littoralis_Contig18.89.2 ID=prot_P-littoralis_Contig18.89.2|Name=mRNA_P-littoralis_Contig18.89.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=254bp
MKFIPIALLTALSSTHAFLPPLRVPPRAVVARGGGRRGKVTVMETKPRAG
PSGLQNLNKWDPSAQQGFIQPAAHNNNGVRVAAILTAAALASKGTLMVPG
NLSKFVHILAYAVWMGTTFWTTFVAGITMMRNLPRQTFGKLQSKLFPAYF
QLNFSAILAIFIIRGFPLGTRAGVTLIVSLCATFLNLVLLEPKSTSVMFK
RYKLEDNNQKDSEEYKKLGNKFGLFHGLSSFANLGTLIGSVVYAWELASM
LPA*
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mRNA from alignment at P-littoralis_Contig18:422800..426562-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig18.89.2 ID=mRNA_P-littoralis_Contig18.89.2|Name=mRNA_P-littoralis_Contig18.89.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=3763bp|location=Sequence derived from alignment at P-littoralis_Contig18:422800..426562- (Pylaiella littoralis U1_48)
TGTTCTTCTGACGTCTGGCACATAGGCGTTTGGAACAGTCTGTTTTCAAA GGAGGCAGCTGCTAGGAGTATCAGGAGAGGAGGAATACCACGTGCTAGAT ACTGGTCAAAGTTTCGGTAAAATGAAGTTTATCCCGATCGCGTTGCTGAC TGCCTTGTCTTCAACCCATGCCTTCTTGCCTCCTCTGCGGGTCCCGCCGC GAGCTGTTGTTGCCCGTGGAGGAGGGAGGAGAGGAAAGGTGACGACGCTT CAGAGTTGGATGTGCATGTCGCATGTGTTTCGGGAATCGTGTCAACGTTG AATAACAGCGATCTGCCGTCATTTATGGACATGTTTTTTTCAACTTGAAA CAGTTCAATGAGCACATTCCAACTCTACTTGGTATGCTACGACGAGTGCT GTATCCTCTTGCTCCATCTGCTACTGCGTCAGTGCTGAGTGCTGTATCCT CTTGCTCCAGCATCTGCTACTGCGTCAGTTGTAGCATCACAGCAGCTGCT TGTACTCGTAGCACGTTCAATGAGGGCCATTTCTCATTTTCCAAGCTCCC ACTTCACAAGAAGTAATGTACACCACCGGGTACAGTAATGATACGCATAC CTCCGTGGGACAACTCTAAAGCAAGGCAAAGGTGGGTGCGATGATGTGCA TACTGCTGTATCCTACAAAATGGAACATTTTCCTGTTTCAAATGGCGGCA TCGGCGCTCATTCTTGAGAGAAATGAATAAAAATAAGGATGGCGCCTTGT GTGGGTCACGCCCCAGCATTCCATGATATGAGCAGTTGTTCGTTCCCTCC AGGTGACGGTGATGGAGACGAAGCCGAGAGCGGGTCCCAGCGGTTTGCAA AATCTGAACAAGTGGGATCCATCCGCACAGCAAGGGTTCATCCAACCAGC GGCCCATAACAACAACGGGGTTAGGGTCGCCGCTATTCTTACCGCCGCCG CACTGGCTTCGAAAGGCACTCTCATGGTTCCTGGCAACTTATCCAAGGTG ACCCACGGCTAGAAATTTTTGCATGTCGTATGACATGGTCTAAATGCCAC CAGCATAGTGTCTGTATACAGCCCGTGAGGCTGCTGTAGCAAAGGGGGGG AACCGGTGTTGCAACGGGTCTATACACGTGCTTCATTTCTGGCACGTGCG AGGTTCCTCTTCCTCTGCGCCGCGACAGCCACTTGCATGACTGGGATTGC TGTAAGAAGTCACGGTTAGTTGGGTCATATTCTCACTAGACACCCCACAA ACCTTGACGTAAAACACCGTTCTCTTTCCCCTCTTTTTTTTAACGTTCCA TCGCAGTTCGTCCATATCCTAGCCTATGCAGTGTGGATGGGCACCACATT CTGGACAACTTTTGTGGCGGGCATAACGATGATGCGGAATCTACCACGTC AGACCTTCGGCAAGCTTCAGGTCTGAGTGGTAATTATACCCTGATGGATA TTAAGTTTCAAATGGTGCAGTCAGCCTGCTTCCGTTCATCTCCTAAAGCG CACCCCTCGGGGGGGAATCGACGGTAAGCGTGAACCCTGTCGGTCCTGAG GAGAAGACCTAGCTAAGCGGTTGTATAATGAAACCGCCGACATGAAACCC ACACACACACCCCGCTCCCGCGCACCTCTTTCACACAAAGTACCACAAGT AATGAAAGTGTTACTCATGTAGTGGTGATACTTCAGGAGTACAGGAGCGT CCGCATGCGTCCAACACTCCGAGATCATCCGGGGCTTAATGAGGTTTCAT TATGGAGTACGTCAAAGCAAAGACAGTATCCCCCGGGCTCGCAACTCAAA GTTTTTCGTATTTCGGGGCATGTTTTTTCGGAGGGCAACTCCAGTAGGTT TCTGTTAACGACTCGGGTTTTTGCATCGCTGGCAATCGTGTTCAGTGCCT TGTTTCCCGTGTGGGCACTGATATATGTACAAAATGAAACGCCTACTACC CTTTAACGCCGTGCCCCTCTCTCCGTAGTCAAAGCTGTTCCCGGCCTACT TCCAGCTCAACTTCTCCGCGATATTGGCGATCTTCATCATCCGTGGTTTT CCTCTCGGGTAAGCACGGGCCTCGATGTTTTCCAAGTATCAGAATGCTCT TTGCGCAGATGTCAGGTCGGTACGCGGCGAACACATGCAATGAAGAAAAG TGGCGCGCACACACACGTTCTTCCTCACAAAGATCGCACGTTCTCGCTCA CCCTTTGTTTCCCCCCCTCCAAAATAAATCTGCAGGACCCGAGCAGGCGT GACGTTGATTGTTTCGCTGTGTGCAACCTTTTTGAATTTGGTCCTGCTCG AACCCAAGTCCACAAGCGTCATGTTTAAACGGTGAGCTTGCTCTCGGAAA TTGAAGTCGCGACAGGTAAGCTGCTCGAACGCATTCAGCGGGAAAACTCA GCCCGGCGGCTTTCAAGGGTTGCTTAAGCCCGAGTACGGCCATCCGTGCT CCGCGTAGCCAAGGGGCACAAAAAGACGTCGATGCCTATGAAGGAGCAGT CAAAAAAGATTGCTCATATTTTTCAGTTTCGTGGCTTGCGAACCCCGGTC AAAGTGCGCTCCTCTTCTTGGTGAACAGGTACAAGTTGGAGGACAATAAT CAAAAAGATTCGGAGGAGTACAAGAAGCTCGGAAACAAGTTCGGGCTGTT CCATGGACTTTCATCTTTCGCCAATCTTGGAACTCTCATCGGAAGTGTTG TGTATGCGTGGGAGCTGGCGTCGATGCTGCCTGCATGAAATGGAGCATGT ACATGTATACGAAGTATATGTATGTCTCGAAGCGTGTTTCAAAGTTGCGA CCAGCAAATACCTGGTTGGTACAATAGGACGGATTTGAGGTAGATGTGAG CTAGCCAAAAGTAGCTGAGGGTATCGTTTGGTCAAAAAAGTTTCGATTTA GGATACGGTCCGTGCAGAACAATTTGTCCATTTTTATTATTCGTTTCGAG GATATCTCTTGAACAAGACAAAATTTGGGCCAAAATCACCCCCGGAATTG CCCCAAAATGCCTCACTTTCCCTGTGATCGAGTAAAATTGATCCCGATTT CCTTCTAAAAGTTCAAGATTATCATGTAGAACAGAAATATTTTTGGCGTC GGCTTCGAACTAAGTCGATCACCGCGAAGTCTTTGTTACTTATTTTTTAT TTTGCTACTAAATCGTCTCTTCCCTTACCCAGAGTCGGCGAAATTGGAAA ACATCGAATATCTCACGAAATTTCGTTTTTCTTGAAAAAATAAATAATAC GCACGTGGGGATTGACGAGAGCAATCGTTTGCCGTACTCTATATAAATCA CACGGCCAGTTTTCTCGTTTAAAACGAATCAAGTTTACCTTCCAGATCAA TATTTTTGCCGATATCTCGATCAATTTTGACTTTTCAGAAAAAAAACAAA AACACGCACCTGGGAAATTCCGAGAGTTGTTCGAATCCGTTGAGATATGG AAATCACAGCGATGCCCCCCGCTCGGTAAACGAATCAAGTTTTTCCAGGT CATTCACAAAAGAAGATTCTAAAAAAAAAAAAAACGTGGGGATCTGCGCC TGGAGACAGGGCGCTTGCCGATGTCTTTGGATTTTAGAACAACCAACCCC ATCCCGAGATAAATGTACCCGGGTGGAGGCCCTGACATTGGACAAATTGT TTTGCACGGACCATATGAACCTCAACGTACGCTGCGCTGTAGGTACGCAA TGAACGTAAAACCCGCATGTACTGCGTGAGATCGCTGACTCTACAACTTA CGATTTACAGATG
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Coding sequence (CDS) from alignment at P-littoralis_Contig18:422800..426562-

>mRNA_P-littoralis_Contig18.89.2 ID=mRNA_P-littoralis_Contig18.89.2|Name=mRNA_P-littoralis_Contig18.89.2|organism=Pylaiella littoralis U1_48|type=CDS|length=762bp|location=Sequence derived from alignment at P-littoralis_Contig18:422800..426562- (Pylaiella littoralis U1_48)
ATGAAGTTTATCCCGATCGCGTTGCTGACTGCCTTGTCTTCAACCCATGC
CTTCTTGCCTCCTCTGCGGGTCCCGCCGCGAGCTGTTGTTGCCCGTGGAG
GAGGGAGGAGAGGAAAGGTGACGGTGATGGAGACGAAGCCGAGAGCGGGT
CCCAGCGGTTTGCAAAATCTGAACAAGTGGGATCCATCCGCACAGCAAGG
GTTCATCCAACCAGCGGCCCATAACAACAACGGGGTTAGGGTCGCCGCTA
TTCTTACCGCCGCCGCACTGGCTTCGAAAGGCACTCTCATGGTTCCTGGC
AACTTATCCAAGTTCGTCCATATCCTAGCCTATGCAGTGTGGATGGGCAC
CACATTCTGGACAACTTTTGTGGCGGGCATAACGATGATGCGGAATCTAC
CACGTCAGACCTTCGGCAAGCTTCAGTCAAAGCTGTTCCCGGCCTACTTC
CAGCTCAACTTCTCCGCGATATTGGCGATCTTCATCATCCGTGGTTTTCC
TCTCGGGACCCGAGCAGGCGTGACGTTGATTGTTTCGCTGTGTGCAACCT
TTTTGAATTTGGTCCTGCTCGAACCCAAGTCCACAAGCGTCATGTTTAAA
CGGTACAAGTTGGAGGACAATAATCAAAAAGATTCGGAGGAGTACAAGAA
GCTCGGAAACAAGTTCGGGCTGTTCCATGGACTTTCATCTTTCGCCAATC
TTGGAACTCTCATCGGAAGTGTTGTGTATGCGTGGGAGCTGGCGTCGATG
CTGCCTGCATGA
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