mRNA_P-littoralis_Contig18.75.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: D8LRS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS5_ECTSI) HSP 1 Score: 536 bits (1382), Expect = 3.560e-187 Identity = 275/291 (94.50%), Postives = 280/291 (96.22%), Query Frame = 1
Query: 1 MTGNGGANENSHLAPEGVGPDYGKDVRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIGQNH 873
MTGN ANENSHLAPEGVG DYGKDVRNAFM GDQQASRLLHDARAGQ HDEAHS++GDYLKAMVFGGLDGILTSFAIVAGAA GG LPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEK+REEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSP ILF VAC+VTAA+LFGMGAIKSQFGTRHWCTSGTEMLFLGGSCA LAFEIGK VDGLIGQNH
Sbjct: 1 MTGNASANENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAA-GGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLIGQNH 290
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: A0A835YUT7_9STRA (VIT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT7_9STRA) HSP 1 Score: 369 bits (946), Expect = 2.260e-121 Identity = 191/262 (72.90%), Postives = 220/262 (83.97%), Query Frame = 1
Query: 76 VRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLI 861
+R+A+ GD +ASRLLHDARAG+PH+EAHS+ G+YLK MVFGGLDGILTSFA+VAGAA GG L VVLVLGFSNI ADALSMGVGEYLSS+AHNEYVMAEK+REEWELKNHREGEI EMV IF +RGMS++DA DV+ KMAKYDDFFVNLMM+EEL LQVP D+ T+KEGF+MFLSFA FGA+PLLGY I P++ PD S ILF +AC VT +LF MGAIKS+F TR W SG EM+ LGG CA +AFEIG +VDGL+
Sbjct: 18 IRDAYNHGDAEASRLLHDARAGEPHEEAHSEAGEYLKVMVFGGLDGILTSFAVVAGAAGGG-LDWPVVLVLGFSNILADALSMGVGEYLSSQAHNEYVMAEKRREEWELKNHREGEIAEMVAIFTQRGMSQEDASDVVNKMAKYDDFFVNLMMSEELQLQVPESQDE-TIKEGFIMFLSFATFGALPLLGYTIFPMLDPDISNAILFKLACAVTGVSLFLMGAIKSKFATRSWYASGFEMVCLGGVCAAVAFEIGNLVDGLL 277
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: W7TLX2_9STRA (Vacuolar iron family transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLX2_9STRA) HSP 1 Score: 330 bits (846), Expect = 4.920e-106 Identity = 174/264 (65.91%), Postives = 206/264 (78.03%), Query Frame = 1
Query: 76 VRNAFMAGDQQASRLLHDAR-AGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIG 864
++A+ D +ASRL+H + + HDE H GDY+K+M+FGGLDGILTSFAIVAGAA GG LPV VV+VLGFSNIFADA SMG+GEYLSSKAHNE+V EK+RE WEL+N REGEI EM++I+ ERGM DAEDV+ KM+KYDDFFVN+MM EELGLQVP +DD VKEG VMFLSFA FGAMPLLGY ++PL P P LF +AC VTA TLF MGA+KS+F TR W SG EML LGG CA++A+EIG +V L+G
Sbjct: 32 AQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGG-LPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPD-PNDDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLVG 293
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: A0A7S3XV86_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV86_HETAK) HSP 1 Score: 310 bits (794), Expect = 1.240e-98 Identity = 166/264 (62.88%), Postives = 201/264 (76.14%), Query Frame = 1
Query: 76 VRNAFMAGDQQASRLLHDAR--AGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLI 861
R A+ D +ASR++HD+ AGQ H E H G+Y+KAM+FGGLDGILTSFAIVAGA GG L VL+LGFSNI ADALSMGVGEYLSSKAHNEYV++EKKREEWEL+NH+EGEI EM++I+ ERGM + DA V+ MAKY+ FFVN+MM EELGLQVP D+D+T+KEG VMFLSFA FGA+PLLGYVI P + + LF A T LF MGA+KS FGT+ W SG E L LGG+CAL+A+E+G +V+GL+
Sbjct: 11 ARAAYYNLDPEASRIIHDSTSAAGQ-HRENHKGGGEYVKAMIFGGLDGILTSFAIVAGAVGGG-LAWQSVLILGFSNILADALSMGVGEYLSSKAHNEYVLSEKKREEWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDEDETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLV 272
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: A0A6V1NR54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NR54_HETAK) HSP 1 Score: 296 bits (758), Expect = 5.520e-93 Identity = 162/285 (56.84%), Postives = 203/285 (71.23%), Query Frame = 1
Query: 19 ANENSHLAPEGVGP--DYGKDVRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQV--PTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLI 861
A E S L + G +Y K R A+ D +A R HD HD+ ++ G+ LKA+VFGGLDG+LTSFAI+AGAA GG + V VVLVLGFSNI ADALSMGVGEYLSS+AH EYV++E++REEWEL+NHREGE+ EMVEI+ RGM+R DAE V+ ++AKYD+FFVN+MM EELG+ D DTV+EG +MF +FA FG+MPLLGY +VP + PD+S LF VA VT LFG+GA+KS F T+ W SG E L LGG CA +A+EIG V ++
Sbjct: 9 AGEGSSLVRKNSGSHVNYSK-ARKAYAEKDVEALRNAHDNMEEGAHDDHYTPMGEKLKAVVFGGLDGVLTSFAIIAGAAGGG-MGVDVVLVLGFSNIVADALSMGVGEYLSSRAHAEYVLSERRREEWELRNHREGEVREMVEIYVNRGMARDDAEVVLNRIAKYDEFFVNVMMAEELGMPANGQVADPADTVQEGLIMFAAFAVFGSMPLLGYCVVPALAPDASSSELFAVAVFVTLLFLFGLGAVKSHFSTKSWYCSGIETLLLGGCCAGIAYEIGNCVQSML 291
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: A0A7S2H009_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H009_9STRA) HSP 1 Score: 296 bits (758), Expect = 1.430e-92 Identity = 167/283 (59.01%), Postives = 197/283 (69.61%), Query Frame = 1
Query: 16 GANENSHLAPEGVGPDYGKDVRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDD-DTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLI 861
G E + L P G + KD R AF D +ASR HD R +E H +G LK M+FGGLDGILTSFAIVAGAA GG L VVLVLGFSNIFADALSMGVGE+LSSKA NE++++E+KRE WE++N+ EGEI EMVEI+E RGMS+ DA+ VI M+KY DFFV++MM EEL LQVP D ++ KEG VMF SFA FG+ PLLGYVI P PD LF AC VT LFGMG +KS F T +W G E L LGG+CA +AF IG+ VDGL+
Sbjct: 39 GTGEGTKLLPSDNGQE--KDARKAFEGADVEASRNYHDNRDLLNSEEQHQTEGGLLKPMIFGGLDGILTSFAIVAGAA-GGSLSTGVVLVLGFSNIFADALSMGVGEFLSSKAENEWILSERKREAWEMENYPEGEIREMVEIYESRGMSKDDAQIVIDTMSKYKDFFVDVMMAEELQLQVPEDDHVWESFKEGVVMFCSFATFGSFPLLGYVIFPTFFPDMGSDGLFYGACAVTGVVLFGMGCVKSIFSTANWFLCGMETLLLGGACATVAFTIGQFVDGLV 318
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: A0A1E7FSD0_9STRA (Vacuolar Fe2+/Mn2+ uptake transporter-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSD0_9STRA) HSP 1 Score: 289 bits (740), Expect = 1.390e-90 Identity = 155/272 (56.99%), Postives = 202/272 (74.26%), Query Frame = 1
Query: 76 VRNAFMAGDQQASRLLHDARA----GQPHDEA---HSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDD-DDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIGQ 867
R A+ +G+ ASR H+ + G H + H G L+ ++FGGLDGILTSFAIVAGAA GG +PV+ VLVLGFSNIFADALSMGVGE+LSSKA+NE++++E++REEWE++N REGEI EM++I+ +G++ +DA VI MAKY+DFFV++MM +EL LQVP + + ++KEGFVMF SFAFFGAMPLLGYVI+PL+ PD P LF AC+VTA LF +G+IKS F +W SG E L LGG+CA +AF IG V+GL+ +
Sbjct: 1 ARLAYESGNTDASRRYHETKTAVADGPEHTDEEPWHQSSGGLLQPVIFGGLDGILTSFAIVAGAAGGG-IPVSAVLVLGFSNIFADALSMGVGEFLSSKANNEWILSEREREEWEMQNFREGEIQEMIDIYVNKGLTLEDATIVIKTMAKYEDFFVDIMMQQELELQVPESNHVEQSMKEGFVMFCSFAFFGAMPLLGYVIIPLLFPDLEPTYLFKSACVVTALVLFLLGSIKSNFSRSNWFLSGLETLLLGGTCATVAFVIGSFVNGLLDE 271
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: B7FUB4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUB4_PHATC) HSP 1 Score: 289 bits (739), Expect = 2.640e-90 Identity = 157/271 (57.93%), Postives = 198/271 (73.06%), Query Frame = 1
Query: 67 GKDVRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDD-DDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIGQNHD 876
G R+AF + D + SR HDA++ ++ H +G LK ++FGGLDGILTSFAIVAGAA GG L VVL+LG SNIFADALSMGVGE+LSSKA+NE++++E+ REEWEL+N+ EGEI EMVEIFE++GMS +DA I MAKY DFFV++MM +EL LQVP D +++KEG VMF SFAFFGA+PLLGYV+ PL D S G LF ACIVT LF MG++KS F + W +G E L LGG+CA +AF IG++V + G + D
Sbjct: 11 GSAARDAFQSADAKKSRQYHDAKSAS--EDGHQTEGGMLKPIIFGGLDGILTSFAIVAGAA-GGELSPQVVLILGVSNIFADALSMGVGEFLSSKANNEWILSERAREEWELENYPEGEIKEMVEIFEDKGMSHEDAVSCINTMAKYKDFFVDIMMQQELELQVPDKDHIRESMKEGVVMFCSFAFFGALPLLGYVLFPLEFHDMSEGELFVSACIVTGMVLFFMGSVKSFFSNQQWFIAGMETLLLGGACATVAFTIGQLVKSVYGDDAD 278
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: A0A7S4MYN1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MYN1_9STRA) HSP 1 Score: 288 bits (738), Expect = 5.360e-90 Identity = 155/264 (58.71%), Postives = 187/264 (70.83%), Query Frame = 1
Query: 76 VRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDD-DTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIG 864
R A+ D AS+ HD R + E H +G LK M+FGGLDGILTSFAIVAGAA GG L +V+L+LGFSNIFADALSMGVGE+LSSKA NE++++E++RE WE++N+ EGEI EMV+I+ RGM R DAE VI M+KY DFFV++MM EEL LQVP D + KEG VMF SFA FGA PLLGY I+P P LFT ACIVT LF MG +KS FG+ HW G E L LGG+CA +A+ IG+ VDGL+G
Sbjct: 27 ARKAYEGLDTDASKNFHDTRVIEESTENHKTEGGLLKPMIFGGLDGILTSFAIVAGAA-GGSLSTSVILILGFSNIFADALSMGVGEFLSSKAENEWILSERERENWEMENYPEGEIREMVDIYVSRGMERDDAEMVIKTMSKYQDFFVDVMMAEELQLQVPEDDYQMENFKEGVVMFCSFATFGAFPLLGYAIIPAAFPYLGEDALFTCACIVTGIVLFCMGCVKSNFGSHHWFWCGMETLLLGGACAAIAYTIGQFVDGLVG 289
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: B8BVF1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVF1_THAPS) HSP 1 Score: 288 bits (736), Expect = 6.930e-90 Identity = 151/282 (53.55%), Postives = 202/282 (71.63%), Query Frame = 1
Query: 25 ENSHLAPEGVGPDYGKDVRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDD-DTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIGQ 867
E++ L P+G R A+ D +AS+ HD R E H +G LK ++FGGLDGILT+FAIVAGAA GG +P+ V+LVLGFSNIFADAL+MGVGE+LSSKA NE++++E++RE WE++N+ EGEI EM++I++ERGM+ DA+ VI MAKY +FFV++MM EEL LQVP D +++KEG VMF +FA FG++PLLGY+++P + P +LFT ACIVT LFGMG +KS F +W T G E L LGG+CA +A+ IG+ VD LI +
Sbjct: 6 ESTSLVPDGA--------RKAYDGLDTEASKSFHDKRHNTSGVEMHQTEGGMLKPLIFGGLDGILTAFAIVAGAA-GGSMPIPVILVLGFSNIFADALAMGVGEFLSSKAENEWILSERRRENWEMENYPEGEIAEMIDIYQERGMTHDDAKLVIETMAKYKEFFVDVMMAEELALQVPDEDHKIESMKEGVVMFGAFATFGSLPLLGYIVIPALFPSLGEDVLFTAACIVTGMVLFGMGCVKSIFSAANWFTCGLETLLLGGACATVAYTIGQFVDKLIAE 278 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig18.75.3 >prot_P-littoralis_Contig18.75.3 ID=prot_P-littoralis_Contig18.75.3|Name=mRNA_P-littoralis_Contig18.75.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=293bp MTGNGGANENSHLAPEGVGPDYGKDVRNAFMAGDQQASRLLHDARAGQPHback to top mRNA from alignment at P-littoralis_Contig18:339600..344261- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig18.75.3 ID=mRNA_P-littoralis_Contig18.75.3|Name=mRNA_P-littoralis_Contig18.75.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4662bp|location=Sequence derived from alignment at P-littoralis_Contig18:339600..344261- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig18:339600..344261- >mRNA_P-littoralis_Contig18.75.3 ID=mRNA_P-littoralis_Contig18.75.3|Name=mRNA_P-littoralis_Contig18.75.3|organism=Pylaiella littoralis U1_48|type=CDS|length=879bp|location=Sequence derived from alignment at P-littoralis_Contig18:339600..344261- (Pylaiella littoralis U1_48)back to top |