mRNA_P-littoralis_Contig18.75.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig18.75.3
Unique NamemRNA_P-littoralis_Contig18.75.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: D8LRS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS5_ECTSI)

HSP 1 Score: 536 bits (1382), Expect = 3.560e-187
Identity = 275/291 (94.50%), Postives = 280/291 (96.22%), Query Frame = 1
Query:    1 MTGNGGANENSHLAPEGVGPDYGKDVRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIGQNH 873
            MTGN  ANENSHLAPEGVG DYGKDVRNAFM GDQQASRLLHDARAGQ HDEAHS++GDYLKAMVFGGLDGILTSFAIVAGAA GG LPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEK+REEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSP ILF VAC+VTAA+LFGMGAIKSQFGTRHWCTSGTEMLFLGGSCA LAFEIGK VDGLIGQNH
Sbjct:    1 MTGNASANENSHLAPEGVGADYGKDVRNAFMTGDQQASRLLHDARAGQAHDEAHSEKGDYLKAMVFGGLDGILTSFAIVAGAA-GGHLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKRREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPAILFFVACLVTAASLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCAALAFEIGKAVDGLIGQNH 290          
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: A0A835YUT7_9STRA (VIT family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT7_9STRA)

HSP 1 Score: 369 bits (946), Expect = 2.260e-121
Identity = 191/262 (72.90%), Postives = 220/262 (83.97%), Query Frame = 1
Query:   76 VRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLI 861
            +R+A+  GD +ASRLLHDARAG+PH+EAHS+ G+YLK MVFGGLDGILTSFA+VAGAA GG L   VVLVLGFSNI ADALSMGVGEYLSS+AHNEYVMAEK+REEWELKNHREGEI EMV IF +RGMS++DA DV+ KMAKYDDFFVNLMM+EEL LQVP   D+ T+KEGF+MFLSFA FGA+PLLGY I P++ PD S  ILF +AC VT  +LF MGAIKS+F TR W  SG EM+ LGG CA +AFEIG +VDGL+
Sbjct:   18 IRDAYNHGDAEASRLLHDARAGEPHEEAHSEAGEYLKVMVFGGLDGILTSFAVVAGAAGGG-LDWPVVLVLGFSNILADALSMGVGEYLSSQAHNEYVMAEKRREEWELKNHREGEIAEMVAIFTQRGMSQEDASDVVNKMAKYDDFFVNLMMSEELQLQVPESQDE-TIKEGFIMFLSFATFGALPLLGYTIFPMLDPDISNAILFKLACAVTGVSLFLMGAIKSKFATRSWYASGFEMVCLGGVCAAVAFEIGNLVDGLL 277          
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: W7TLX2_9STRA (Vacuolar iron family transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLX2_9STRA)

HSP 1 Score: 330 bits (846), Expect = 4.920e-106
Identity = 174/264 (65.91%), Postives = 206/264 (78.03%), Query Frame = 1
Query:   76 VRNAFMAGDQQASRLLHDAR-AGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIG 864
             ++A+   D +ASRL+H  +   + HDE H   GDY+K+M+FGGLDGILTSFAIVAGAA GG LPV VV+VLGFSNIFADA SMG+GEYLSSKAHNE+V  EK+RE WEL+N REGEI EM++I+ ERGM   DAEDV+ KM+KYDDFFVN+MM EELGLQVP   +DD VKEG VMFLSFA FGAMPLLGY ++PL  P   P  LF +AC VTA TLF MGA+KS+F TR W  SG EML LGG CA++A+EIG +V  L+G
Sbjct:   32 AQHAYRLNDVEASRLIHQQKFEAKTHDETHDSVGDYVKSMIFGGLDGILTSFAIVAGAAGGG-LPVEVVMVLGFSNIFADAFSMGMGEYLSSKAHNEFVFKEKERESWELQNFREGEIKEMIDIYVERGMEPDDAEDVVRKMSKYDDFFVNVMMVEELGLQVPD-PNDDIVKEGVVMFLSFAGFGAMPLLGYALIPLCFPSLGPSHLFNIACGVTALTLFIMGAVKSKFSTRGWLHSGLEMLVLGGICAVMAYEIGHLVSSLVG 293          
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: A0A7S3XV86_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV86_HETAK)

HSP 1 Score: 310 bits (794), Expect = 1.240e-98
Identity = 166/264 (62.88%), Postives = 201/264 (76.14%), Query Frame = 1
Query:   76 VRNAFMAGDQQASRLLHDAR--AGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLI 861
             R A+   D +ASR++HD+   AGQ H E H   G+Y+KAM+FGGLDGILTSFAIVAGA  GG L    VL+LGFSNI ADALSMGVGEYLSSKAHNEYV++EKKREEWEL+NH+EGEI EM++I+ ERGM + DA  V+  MAKY+ FFVN+MM EELGLQVP  D+D+T+KEG VMFLSFA FGA+PLLGYVI P +    +   LF  A   T   LF MGA+KS FGT+ W  SG E L LGG+CAL+A+E+G +V+GL+
Sbjct:   11 ARAAYYNLDPEASRIIHDSTSAAGQ-HRENHKGGGEYVKAMIFGGLDGILTSFAIVAGAVGGG-LAWQSVLILGFSNILADALSMGVGEYLSSKAHNEYVLSEKKREEWELRNHKEGEIKEMIDIYVERGMGQADATQVVNTMAKYEAFFVNVMMAEELGLQVPDEDEDETLKEGLVMFLSFACFGALPLLGYVIFPSVLGVDNESTLFWTAVATTLTVLFVMGAVKSYFGTKSWYASGAETLALGGACALVAYEVGGLVNGLV 272          
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: A0A6V1NR54_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NR54_HETAK)

HSP 1 Score: 296 bits (758), Expect = 5.520e-93
Identity = 162/285 (56.84%), Postives = 203/285 (71.23%), Query Frame = 1
Query:   19 ANENSHLAPEGVGP--DYGKDVRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQV--PTGDDDDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLI 861
            A E S L  +  G   +Y K  R A+   D +A R  HD      HD+ ++  G+ LKA+VFGGLDG+LTSFAI+AGAA GG + V VVLVLGFSNI ADALSMGVGEYLSS+AH EYV++E++REEWEL+NHREGE+ EMVEI+  RGM+R DAE V+ ++AKYD+FFVN+MM EELG+       D  DTV+EG +MF +FA FG+MPLLGY +VP + PD+S   LF VA  VT   LFG+GA+KS F T+ W  SG E L LGG CA +A+EIG  V  ++
Sbjct:    9 AGEGSSLVRKNSGSHVNYSK-ARKAYAEKDVEALRNAHDNMEEGAHDDHYTPMGEKLKAVVFGGLDGVLTSFAIIAGAAGGG-MGVDVVLVLGFSNIVADALSMGVGEYLSSRAHAEYVLSERRREEWELRNHREGEVREMVEIYVNRGMARDDAEVVLNRIAKYDEFFVNVMMAEELGMPANGQVADPADTVQEGLIMFAAFAVFGSMPLLGYCVVPALAPDASSSELFAVAVFVTLLFLFGLGAVKSHFSTKSWYCSGIETLLLGGCCAGIAYEIGNCVQSML 291          
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: A0A7S2H009_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H009_9STRA)

HSP 1 Score: 296 bits (758), Expect = 1.430e-92
Identity = 167/283 (59.01%), Postives = 197/283 (69.61%), Query Frame = 1
Query:   16 GANENSHLAPEGVGPDYGKDVRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDD-DTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLI 861
            G  E + L P   G +  KD R AF   D +ASR  HD R     +E H  +G  LK M+FGGLDGILTSFAIVAGAA GG L   VVLVLGFSNIFADALSMGVGE+LSSKA NE++++E+KRE WE++N+ EGEI EMVEI+E RGMS+ DA+ VI  M+KY DFFV++MM EEL LQVP  D   ++ KEG VMF SFA FG+ PLLGYVI P   PD     LF  AC VT   LFGMG +KS F T +W   G E L LGG+CA +AF IG+ VDGL+
Sbjct:   39 GTGEGTKLLPSDNGQE--KDARKAFEGADVEASRNYHDNRDLLNSEEQHQTEGGLLKPMIFGGLDGILTSFAIVAGAA-GGSLSTGVVLVLGFSNIFADALSMGVGEFLSSKAENEWILSERKREAWEMENYPEGEIREMVEIYESRGMSKDDAQIVIDTMSKYKDFFVDVMMAEELQLQVPEDDHVWESFKEGVVMFCSFATFGSFPLLGYVIFPTFFPDMGSDGLFYGACAVTGVVLFGMGCVKSIFSTANWFLCGMETLLLGGACATVAFTIGQFVDGLV 318          
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: A0A1E7FSD0_9STRA (Vacuolar Fe2+/Mn2+ uptake transporter-like protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSD0_9STRA)

HSP 1 Score: 289 bits (740), Expect = 1.390e-90
Identity = 155/272 (56.99%), Postives = 202/272 (74.26%), Query Frame = 1
Query:   76 VRNAFMAGDQQASRLLHDARA----GQPHDEA---HSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDD-DDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIGQ 867
             R A+ +G+  ASR  H+ +     G  H +    H   G  L+ ++FGGLDGILTSFAIVAGAA GG +PV+ VLVLGFSNIFADALSMGVGE+LSSKA+NE++++E++REEWE++N REGEI EM++I+  +G++ +DA  VI  MAKY+DFFV++MM +EL LQVP  +  + ++KEGFVMF SFAFFGAMPLLGYVI+PL+ PD  P  LF  AC+VTA  LF +G+IKS F   +W  SG E L LGG+CA +AF IG  V+GL+ +
Sbjct:    1 ARLAYESGNTDASRRYHETKTAVADGPEHTDEEPWHQSSGGLLQPVIFGGLDGILTSFAIVAGAAGGG-IPVSAVLVLGFSNIFADALSMGVGEFLSSKANNEWILSEREREEWEMQNFREGEIQEMIDIYVNKGLTLEDATIVIKTMAKYEDFFVDIMMQQELELQVPESNHVEQSMKEGFVMFCSFAFFGAMPLLGYVIIPLLFPDLEPTYLFKSACVVTALVLFLLGSIKSNFSRSNWFLSGLETLLLGGTCATVAFVIGSFVNGLLDE 271          
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: B7FUB4_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FUB4_PHATC)

HSP 1 Score: 289 bits (739), Expect = 2.640e-90
Identity = 157/271 (57.93%), Postives = 198/271 (73.06%), Query Frame = 1
Query:   67 GKDVRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDD-DDTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIGQNHD 876
            G   R+AF + D + SR  HDA++    ++ H  +G  LK ++FGGLDGILTSFAIVAGAA GG L   VVL+LG SNIFADALSMGVGE+LSSKA+NE++++E+ REEWEL+N+ EGEI EMVEIFE++GMS +DA   I  MAKY DFFV++MM +EL LQVP  D   +++KEG VMF SFAFFGA+PLLGYV+ PL   D S G LF  ACIVT   LF MG++KS F  + W  +G E L LGG+CA +AF IG++V  + G + D
Sbjct:   11 GSAARDAFQSADAKKSRQYHDAKSAS--EDGHQTEGGMLKPIIFGGLDGILTSFAIVAGAA-GGELSPQVVLILGVSNIFADALSMGVGEFLSSKANNEWILSERAREEWELENYPEGEIKEMVEIFEDKGMSHEDAVSCINTMAKYKDFFVDIMMQQELELQVPDKDHIRESMKEGVVMFCSFAFFGALPLLGYVLFPLEFHDMSEGELFVSACIVTGMVLFFMGSVKSFFSNQQWFIAGMETLLLGGACATVAFTIGQLVKSVYGDDAD 278          
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: A0A7S4MYN1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MYN1_9STRA)

HSP 1 Score: 288 bits (738), Expect = 5.360e-90
Identity = 155/264 (58.71%), Postives = 187/264 (70.83%), Query Frame = 1
Query:   76 VRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDD-DTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIG 864
             R A+   D  AS+  HD R  +   E H  +G  LK M+FGGLDGILTSFAIVAGAA GG L  +V+L+LGFSNIFADALSMGVGE+LSSKA NE++++E++RE WE++N+ EGEI EMV+I+  RGM R DAE VI  M+KY DFFV++MM EEL LQVP  D   +  KEG VMF SFA FGA PLLGY I+P   P      LFT ACIVT   LF MG +KS FG+ HW   G E L LGG+CA +A+ IG+ VDGL+G
Sbjct:   27 ARKAYEGLDTDASKNFHDTRVIEESTENHKTEGGLLKPMIFGGLDGILTSFAIVAGAA-GGSLSTSVILILGFSNIFADALSMGVGEFLSSKAENEWILSERERENWEMENYPEGEIREMVDIYVSRGMERDDAEMVIKTMSKYQDFFVDVMMAEELQLQVPEDDYQMENFKEGVVMFCSFATFGAFPLLGYAIIPAAFPYLGEDALFTCACIVTGIVLFCMGCVKSNFGSHHWFWCGMETLLLGGACAAIAYTIGQFVDGLVG 289          
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Match: B8BVF1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVF1_THAPS)

HSP 1 Score: 288 bits (736), Expect = 6.930e-90
Identity = 151/282 (53.55%), Postives = 202/282 (71.63%), Query Frame = 1
Query:   25 ENSHLAPEGVGPDYGKDVRNAFMAGDQQASRLLHDARAGQPHDEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSNIFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFEERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDD-DTVKEGFVMFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIKSQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIGQ 867
            E++ L P+G         R A+   D +AS+  HD R      E H  +G  LK ++FGGLDGILT+FAIVAGAA GG +P+ V+LVLGFSNIFADAL+MGVGE+LSSKA NE++++E++RE WE++N+ EGEI EM++I++ERGM+  DA+ VI  MAKY +FFV++MM EEL LQVP  D   +++KEG VMF +FA FG++PLLGY+++P + P     +LFT ACIVT   LFGMG +KS F   +W T G E L LGG+CA +A+ IG+ VD LI +
Sbjct:    6 ESTSLVPDGA--------RKAYDGLDTEASKSFHDKRHNTSGVEMHQTEGGMLKPLIFGGLDGILTAFAIVAGAA-GGSMPIPVILVLGFSNIFADALAMGVGEFLSSKAENEWILSERRRENWEMENYPEGEIAEMIDIYQERGMTHDDAKLVIETMAKYKEFFVDVMMAEELALQVPDEDHKIESMKEGVVMFGAFATFGSLPLLGYIVIPALFPSLGEDVLFTAACIVTGMVLFGMGCVKSIFSAANWFTCGLETLLLGGACATVAYTIGQFVDKLIAE 278          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.75.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRS5_ECTSI3.560e-18794.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YUT7_9STRA2.260e-12172.90VIT family-domain-containing protein n=1 Tax=Tribo... [more]
W7TLX2_9STRA4.920e-10665.91Vacuolar iron family transporter n=2 Tax=Monodopsi... [more]
A0A7S3XV86_HETAK1.240e-9862.88Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V1NR54_HETAK5.520e-9356.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2H009_9STRA1.430e-9259.01Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A1E7FSD0_9STRA1.390e-9056.99Vacuolar Fe2+/Mn2+ uptake transporter-like protein... [more]
B7FUB4_PHATC2.640e-9057.93Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S4MYN1_9STRA5.360e-9058.71Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
B8BVF1_THAPS6.930e-9053.55Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:339600..344261 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRS5
Preferred nameCCC1
PFAMsVIT1
Model size1762
Max annot lvl2759|Eukaryota
KEGG koko:K10610
KEGG Pathwayko03420,ko04120,ko05161,ko05203,map03420,map04120,map05161,map05203
KEGG ModuleM00385,M00386
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003674,GO:0005215,GO:0005381,GO:0005384,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006828,GO:0006873,GO:0006874,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0008324,GO:0009987,GO:0010035,GO:0010038,GO:0010039,GO:0012505,GO:0015075,GO:0015093,GO:0015318,GO:0015684,GO:0016020,GO:0016021,GO:0019725,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030026,GO:0031090,GO:0031224,GO:0034220,GO:0034755,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0046915,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0051716,GO:0055065,GO:0055071,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070838,GO:0070887,GO:0071241,GO:0071248,GO:0071281,GO:0071421,GO:0072503,GO:0072507,GO:0072509,GO:0072511,GO:0097577,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098805,GO:0098852,GO:1903874
Exons8
Evalue3.13e-193
EggNOG OGsCOG1814@1|root,KOG4473@2759|Eukaryota
Ec32 ortholog descriptionCcc1 family
Ec32 orthologEc-08_002260.1
Descriptioncellular manganese ion homeostasis
Cds size879
COG categoryA
BRITEko00000,ko00001,ko00002,ko03400,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.75.3prot_P-littoralis_Contig18.75.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig18 340483..344261 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789862.7871711-UTR-P-littoralis_Contig18:339599..3404821680789862.7871711-UTR-P-littoralis_Contig18:339599..340482Pylaiella littoralis U1_48UTRP-littoralis_Contig18 339600..340482 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789862.7979543-CDS-P-littoralis_Contig18:340482..3406111680789862.7979543-CDS-P-littoralis_Contig18:340482..340611Pylaiella littoralis U1_48CDSP-littoralis_Contig18 340483..340611 -
1680789862.8070476-CDS-P-littoralis_Contig18:340808..3409141680789862.8070476-CDS-P-littoralis_Contig18:340808..340914Pylaiella littoralis U1_48CDSP-littoralis_Contig18 340809..340914 -
1680789862.8151455-CDS-P-littoralis_Contig18:341196..3412851680789862.8151455-CDS-P-littoralis_Contig18:341196..341285Pylaiella littoralis U1_48CDSP-littoralis_Contig18 341197..341285 -
1680789862.8238158-CDS-P-littoralis_Contig18:341515..3416201680789862.8238158-CDS-P-littoralis_Contig18:341515..341620Pylaiella littoralis U1_48CDSP-littoralis_Contig18 341516..341620 -
1680789862.8416338-CDS-P-littoralis_Contig18:342067..3421661680789862.8416338-CDS-P-littoralis_Contig18:342067..342166Pylaiella littoralis U1_48CDSP-littoralis_Contig18 342068..342166 -
1680789862.8553603-CDS-P-littoralis_Contig18:342383..3424841680789862.8553603-CDS-P-littoralis_Contig18:342383..342484Pylaiella littoralis U1_48CDSP-littoralis_Contig18 342384..342484 -
1680789862.867571-CDS-P-littoralis_Contig18:343097..3432311680789862.867571-CDS-P-littoralis_Contig18:343097..343231Pylaiella littoralis U1_48CDSP-littoralis_Contig18 343098..343231 -
1680789862.8804562-CDS-P-littoralis_Contig18:344145..3442611680789862.8804562-CDS-P-littoralis_Contig18:344145..344261Pylaiella littoralis U1_48CDSP-littoralis_Contig18 344146..344261 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig18.75.3

>prot_P-littoralis_Contig18.75.3 ID=prot_P-littoralis_Contig18.75.3|Name=mRNA_P-littoralis_Contig18.75.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=293bp
MTGNGGANENSHLAPEGVGPDYGKDVRNAFMAGDQQASRLLHDARAGQPH
DEAHSKQGDYLKAMVFGGLDGILTSFAIVAGAAAGGRLPVAVVLVLGFSN
IFADALSMGVGEYLSSKAHNEYVMAEKKREEWELKNHREGEILEMVEIFE
ERGMSRQDAEDVIGKMAKYDDFFVNLMMNEELGLQVPTGDDDDTVKEGFV
MFLSFAFFGAMPLLGYVIVPLIKPDSSPGILFTVACIVTAATLFGMGAIK
SQFGTRHWCTSGTEMLFLGGSCALLAFEIGKVVDGLIGQNHD*
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mRNA from alignment at P-littoralis_Contig18:339600..344261-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig18.75.3 ID=mRNA_P-littoralis_Contig18.75.3|Name=mRNA_P-littoralis_Contig18.75.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4662bp|location=Sequence derived from alignment at P-littoralis_Contig18:339600..344261- (Pylaiella littoralis U1_48)
ATGACTGGTAATGGAGGAGCCAATGAAAACTCGCACTTGGCTCCGGAGGG GGTCGGACCGGACTATGGGAAGGACGTGAGGAATGCGTTCATGGCGGGGG ATCAACAGGCGTCTAGGTGACTATCCCTCTCCTCACACGCATCTCCTTAG CAGGACATGTGTTCAGTTACGATCGGAACGACTGTGCGTATCCCCATTAT ACCTATACATACGAGCTCCTGGCGTCTATCACCTGTTTCGTTTCACACTG CTTCGTTGCTATGTTAAAACAATGAATTTGACAAACATGACTGCCGTGGC TCGTCTCTTCGTCCCAGAGAAACCAAGAGAAAACCAACGGAAGAGACGAA GAACTACGGACTACTGCTGTACCAGGTCTCACAGCATGGACATGTGTGAC CAACATCATCACAAGAGATCTCTCACAGCGATCGCTGCCTGCCGCCCTTC CCTCCCTTTGATCGAGCACCCTCTTCTCGATATAAGAAATAAGAGGAAAA GCTTGCTGAGTTGTTGAGCATTTTTTCGCACAGTGAGTCACCTCCGTATT TTCTGCACTCTGGCTCTGCAACAAAACAGCTTTGCTGCAGTAGGCCCTCC CCTTGTCAGCAAGGTACCGCCACATCCTGGTACGAGCATGCTCGAGGCCT GTCGAACGCTACGGCAGTCAAAATTGGTTCCCCAGCGGTTCTACCCTTGT TTGTGGGCAAGCCGAAGTGGCTAGCCGAAAGTGTGCACCACCCACAGCAG CAGTCCCCCATTTTTTTGGAAACCCAATGAACGAAGGGCCGCTTCAGTCC TGCGGTAAGACGGGGACTCAACGACATTCCTTGAACTAGTCACAACAGCA GTGGTTAACTCTACCTGGAAGGTACTGTATAGGAATGTTTCTGGCGCATC CACCATAAATGAGAATCAAACCCGTGTGAAATGTATAATCGGCACATAAC ACCGCCATCGGATGACACACCACAAGCTCCCACGTGTCTAACTTTATATC TTTGGACCTTTCTGCGGACCCCGCGTACAGGCTCCTTCATGATGCCCGAG CAGGCCAGCCCCACGACGAAGCTCACAGTAAACAGGGGGACTATCTCAAG GCCATGGTATTTGGCGGTCTGGATGGTATCCTGACAAGCTTTGCCATCGT CGCCGGCGCCGCAGGTGCGTTACCGAGTTTAATAGAAAACGATTGCACAA AATCTGACAAAAGTTGGCAAAATTTACGGACAGCAGTTGTGAAGCACTCG TTGAATGGCGCCGCGCCCGTGACATGTTTGCCACAATATGGCGCGTCTAC ATCCACTTACTCATCCACGCCGTCACCCTTGCAGTTAAGATTTGAGCTGC ACGCTTCTCGATTTTTAGGGTGCAGCTTTGAATTTTTGCGGGGATAGGTT GTGCCGTTTCCTACAGAACGGCTTATTTCGGGAGCATAACATACTTGAGT TGGTTTTTGACGAGTACGTTTGAAGACATGTTTGACCACACAATCAGAAA GAAAACCTTGCGGCGAGCAATCCTTCTGCGTGATCCCAGCTGCACGCTCC CATATACTTAAGAGGCTCAAGAAGAGGCCAGGAGTGCCACCTGACTAGTG GTGACTGTACCAAAAACCTTCACTGCCGGGGGATCATGGCATCCGGCAGT CTAAGTTTGTATGCGCACTCGTCCCTCGCTATTGGTGTGGTGTTATTTGT CAAGTACATGTGATTTTTGCGGTAAACATTTAGGGCTTACACCGGACGTA CTGGCACGCGCTTGCTGTGGCTATGAGCAGGAGGTCGTCTCCCGGTGGCT GTGGTTCTAGTGCTGGGGTTCAGCAACATATTCGCAGATGCACTCAGCAT GGGTGTCGGCGAATACCTCAGCAGCAAGGTGAGACCCGTTGTGAATTTCC GTCGAGGGCAAGAACATGTTTTTTTTGCATATCATGCAAGCGCGCGTGAG TTTTGTTTTTCCTCCTGACCAAAGCACGAAATGGGAATCGTCGAGGAGGG TCATGCGCTGGCGTACAATTTCTGTTATTTGTTTCGTTTATAGGAACGGC AGTTTTGTCCCTCCGTGACGTCAACGAAACATGCCCCGGTCTCAGGCTCA CAATGAATACGTCATGGCGGAAAAGAAACGAGAAGAATGGGAGCTGAAGA ACCACCGGGAAGGAGAAATTTTGGAGATGGTCGAGATTTTTGAGGTGTGT TCCCGCGAGTTTGGAATCAGGACAGAACGCGAAAGCCTGTTGATGACTTG TGAGTTGTCATTCGATGGGTTCGCACCTCGAAGAGTGTGCGTGGAAGTGA GGATTGTGCCGTACGCATGCTATTCCGTGTCGTGCTCGTGTTTTAAGTTA CAAAGCCAGCGAAGTCGGTTTGACTTGAATTCCTCCCAAGACCTCTTGTG TTTCCGGTAGAGATCATACTTACTCCCAGTCCAGCCGTTGACCTAACTGT TGACGCATCCGCGGACATAATACTTTTGAGGAATACTCGGCATATCGTAC GCTAGTTTCAAGAACGTACGACAAAATTGCGGCACACTTGGGTGACACGA AACAACACGTACGACGAAAACGACCAAACTTGTTCGACTAATCAGAAAGG TCTTCTTTTTGTTTGGTTTCGACATATTTCGTGTTCGCCAGGAACGAGGG ATGAGCCGACAAGATGCGGAGGACGTGATAGGGAAAATGGCCAAGTATGA TGATTTTTTTGTCAATCTCATGATGAACGAAGAACTTGGTCTGCAGGTAT GTGCTCAAAGCATTATCCTATGAATATCAGCACGTTCTGTGCAACGGTCT CTGTTGTAGTACCATTAGCCGTTTCGCATGCCCCCCTCGAACAAGGACTG AGTTGGCACCAGCACACATGGGAGTCACTCGTGTTAATGACGTCGTTGCG TAGACTCTTGCAGCAACTCTACTCGCGCTCGCGTATTGTAAATCCAACCT GAGCACCTGTTCATCTTTCACAAAAGGTACCTACTGGCGACGATGATGAT ACAGTGAAGGAAGGGTTCGTCATGTTCCTGTCCTTCGCGTTTTTCGGCGC AATGCCTCTTCTAGGGTGAGTGCGGTACGCCGCAACGCTAGGTATTCCCA GGCAGGTGCGACAACCGTGCCCGTTGGGCCACTGAGCCTTGCCCTGTATG TATTCCGTAAGTGAATCAATGCATATATCAGCTAGAAATTGTATTCACCC CCCTTTTACCGTTTCACTTATTTCAGGAATCGGAGAGAACATGAAAACAA TTTGAACGGCGGGTGTGAGTTAGTCCCCAATCTGTCATTGAGGGCCATTC CGAATATTCCCAACTTCCCTCTTTCGATTTCGCTGCGATTCCTGCAGGTA CGTCATCGTACCGTTGATCAAGCCTGACTCGTCGCCAGGGATTTTGTTTA CCGTTGCGTGCATTGTGACGGCGGCCACCTTGTTCGGCATGGGAGCAATC AAGGTGCGTCACCCACCGCTGTCGTTGTTTCATACGCCGCGCATGTCTGC CGTTTTTTTCGATCGATGGTCTTTGCGCGAGGACGTTTTTTTTAATAGCG TGCATAGAGCGAGCACCACGCCATAGGTTGTTTTTTATGTCTCGGCTCGC CGCAAGTATCAACAAACCTCACAATCCCTTTCTGTTTCTTCGTTCGTCAG AGTCAATTCGGCACCCGACACTGGTGCACCTCCGGCACAGAAATGCTCTT CCTGGGAGGATCCTGTGCGCTGCTGGCCTTCGAGATAGGAAAGGTAGTGG ACGGGCTTATTGGTCAAAATCACGACTAGCGCAACGGGCCCGTGCCATCC TGTAAACAACGTACGACAGCCCTGTTGATGCGATTACGCACAGTAGTGTG GAGGGAATCACAGTGTCTAATCTTAGAAGCCATGTGTCTTTGGCGAGGGT AGGTCGTTCTAGGTACAATGATGCGTCCAGTACTCCGCCATTTTTTCCCA CTTCATGTATACTGCATTGTGAGCGTTTGAGTCCATGGGCCGAAATGCAA GCGAAAGGCTACCCCGTTACTGCTTGCCCTTATCGCGGGAAGCATTTGAG CCGATCACTAACGCGTCAAGCCCACTTCCGCCTCATGGTGGAAGCAGCGG TGTGACACGATGTGACGATGTCTTTGTTGCTCCTGTTCTCCTGTAGTCGA TAGGATGTGTTGCGAGGAGAACCTTGTACTGTACAACAATTTCAGATTCG GATTGGCGGCATTTGCCGTGGGTCCACCGTAGCCATTACACCCCTCGTAT AATGTCGTCCTCTAGGCCATCAATGCTCTGATAAGTCCCTTTTTTCCTTC GTTCAGCGCGCATCGAAACCCGGGGGGTTGAGTGCTTGTGAACGACATGC GCAACAAACATACGGCCGCGGCGGCTAAGAGAAAAGGCTACTCGACCCGG CCTCGAATCTCCGGCGCCTGACCGGTGGACTCGTCCCATGACACTTGCCC TGCTGATGGTATTTTTCGAAATATGCCGAACTATCATACGTGATACAATC AGCAGAAAATAGTCCTCTCAGAAAGGCGCACGCGACCTCACAGGTGACAT ACGACCATACAGGAGGTGCCCGTACAGGGCACGTGATGAGAGACACGATG GAAACATATACTTCGTATTTCGATAGCCGTCATCTTGGAATACTGGTAGG AAGTGATGGACA
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Coding sequence (CDS) from alignment at P-littoralis_Contig18:339600..344261-

>mRNA_P-littoralis_Contig18.75.3 ID=mRNA_P-littoralis_Contig18.75.3|Name=mRNA_P-littoralis_Contig18.75.3|organism=Pylaiella littoralis U1_48|type=CDS|length=879bp|location=Sequence derived from alignment at P-littoralis_Contig18:339600..344261- (Pylaiella littoralis U1_48)
ATGACTGGTAATGGAGGAGCCAATGAAAACTCGCACTTGGCTCCGGAGGG
GGTCGGACCGGACTATGGGAAGGACGTGAGGAATGCGTTCATGGCGGGGG
ATCAACAGGCGTCTAGGCTCCTTCATGATGCCCGAGCAGGCCAGCCCCAC
GACGAAGCTCACAGTAAACAGGGGGACTATCTCAAGGCCATGGTATTTGG
CGGTCTGGATGGTATCCTGACAAGCTTTGCCATCGTCGCCGGCGCCGCAG
CAGGAGGTCGTCTCCCGGTGGCTGTGGTTCTAGTGCTGGGGTTCAGCAAC
ATATTCGCAGATGCACTCAGCATGGGTGTCGGCGAATACCTCAGCAGCAA
GGCTCACAATGAATACGTCATGGCGGAAAAGAAACGAGAAGAATGGGAGC
TGAAGAACCACCGGGAAGGAGAAATTTTGGAGATGGTCGAGATTTTTGAG
GAACGAGGGATGAGCCGACAAGATGCGGAGGACGTGATAGGGAAAATGGC
CAAGTATGATGATTTTTTTGTCAATCTCATGATGAACGAAGAACTTGGTC
TGCAGGTACCTACTGGCGACGATGATGATACAGTGAAGGAAGGGTTCGTC
ATGTTCCTGTCCTTCGCGTTTTTCGGCGCAATGCCTCTTCTAGGGTACGT
CATCGTACCGTTGATCAAGCCTGACTCGTCGCCAGGGATTTTGTTTACCG
TTGCGTGCATTGTGACGGCGGCCACCTTGTTCGGCATGGGAGCAATCAAG
AGTCAATTCGGCACCCGACACTGGTGCACCTCCGGCACAGAAATGCTCTT
CCTGGGAGGATCCTGTGCGCTGCTGGCCTTCGAGATAGGAAAGGTAGTGG
ACGGGCTTATTGGTCAAAATCACGACTAG
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