prot_P-littoralis_Contig18.70.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig18.70.1
Unique Nameprot_P-littoralis_Contig18.70.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length247
Homology
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A6H5KI28_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI28_9PHAE)

HSP 1 Score: 370 bits (951), Expect = 8.110e-128
Identity = 181/246 (73.58%), Postives = 207/246 (84.15%), Query Frame = 0
Query:    1 MRSRGPLRHLSGQLSVATSSPWVWVAHGVDPTSAICPPSRIQG-SLRAEYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLTE 245
            MRS    R L GQLSVATSSPWVWVA GVDP SAI PP R +G SLR EYV+PAS NHELPTAG PE+AF GRSNQGKSTL+GKLLGNPKLVRASKAPGCT+TVNYFALRE G ++PQ + VDLPGYG+A++SKRAVRGWN AV  YL GR +SVLRRTFVLVD RHGLQ  DEQMLSFLS   V+NMVVLTKV+KASP+QL +SLEG  Q+A+H PAT+P+VHC+SAHKG GM EF NT++ +++
Sbjct:    1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGLSLRGEYVSPASFNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGAESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGMGEFQNTLYGVSD 246          
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A835YYM3_9STRA (YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM3_9STRA)

HSP 1 Score: 208 bits (529), Expect = 1.230e-63
Identity = 110/238 (46.22%), Postives = 148/238 (62.18%), Query Frame = 0
Query:   18 TSSPWVWVAHGVDPTSAI--CPPSRIQG--SLRAEYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFAL-------RESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLT 244
            T SPWVW   G+D  SA+    P   +G  +++A +  P     +LP AG PE+AFCGRSN GKSTL+G L+ N KLVRASK PGCTRTVNYF L       + S  D   VY VDLPGYG+AK   + V+ W  AVE ++  R  ++LRRTFVL+D RHG++  DE M++ L D GV   +VLTK ++ +   +   +EGV++ A    A  PVVH +SA  G G+ +  +TI+ +T
Sbjct:    3 TKSPWVWTMKGMDADSAVHRTDPDIARGCRAMQAGFFPPNLFKFDLPKAGVPEVAFCGRSNVGKSTLVGTLINNTKLVRASKEPGCTRTVNYFGLTAPTRIKKGSEVDRAAVYMVDLPGYGFAKAPVQEVQAWTAAVEGFIVNRDCALLRRTFVLIDGRHGVKQHDEDMMTLLDDHGVSYQIVLTKADQLTKRDIAVVVEGVMRAAARHAACYPVVHVVSARDGHGVLQLLDTIYYVT 240          
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A7S3GRN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GRN4_9STRA)

HSP 1 Score: 164 bits (414), Expect = 4.420e-46
Identity = 92/231 (39.83%), Postives = 129/231 (55.84%), Query Frame = 0
Query:   16 VATSSPWVWVAHGVDPTSAIC---PPSRIQGSLRAEYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFAL-RESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQP--ATVPVVHCLSAHKGLGMSEFTNTI 240
            V T++  ++    +DP   +    P ++   S+   Y+ P+ LN+ LPT G PE AF GRSN GKS+LI  L+GN KLV  SK PGCTR++NY+ L +E  G     Y+VDLPGYG+A+KSK   + W   +  Y+  R  SVLRR FVLVDSR G+ + D  M+  L+   +   +V TKV+  S  +L+ SL     V       A +P +  LS     G+  F  T+
Sbjct:   37 VQTTTSSIYTTTELDPQYDLTKWGPAAKTLFSMHPSYIHPSELNYGLPTNGVPEFAFVGRSNVGKSSLIDALMGNRKLVNVSKEPGCTRSINYYGLSKEKTGKDYSAYFVDLPGYGFARKSKEEQQKWTNMIHQYVSSRDQSVLRRVFVLVDSRRGINNHDATMMDTLNKTFIPYQIVFTKVDLTSKQELYTSLGQAFSVINSSMGGACLPFIPTLSTVDKTGLDHFKLTM 267          
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A482SLS6_9ARCH (Probable GTP-binding protein EngB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLS6_9ARCH)

HSP 1 Score: 163 bits (413), Expect = 6.240e-46
Identity = 87/203 (42.86%), Postives = 125/203 (61.58%), Query Frame = 0
Query:   44 SLRAEYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGG-DAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQP--ATVPVVHCLSAHKGLGMSEFTNTIFSL 243
            SL   Y+ P+  NH+LP+AGRPE+AF GRSN GKS+L+  LLG   L+R SK PGCT T+NY+AL +    D    Y +D+PGYG+AK +K+  + W   V  YL  R   +LRR FVL+DSR G+Q  D +M+  L+ A +   VVLTK +  S  ++ + L  +  V   +   + +P+VH +SA KGLG+ +   +I  +
Sbjct:   70 SLNPTYIPPSYFNHQLPSAGRPEVAFVGRSNVGKSSLVEALLGTKGLLRISKEPGCTTTLNYYALAKGSALDDHACYLIDMPGYGFAKIAKQQQKKWLEIVNSYLMNRDQLLLRRVFVLIDSRRGVQMQDVEMMEMLNHAHIPYQVVLTKKDLVSDKEIKEKLFELFCVISRKKNNSCLPLVHVVSALKGLGLEDLRLSIVEI 272          
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A3M1JLX5_9PROT (Probable GTP-binding protein EngB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JLX5_9PROT)

HSP 1 Score: 155 bits (393), Expect = 1.110e-43
Identity = 84/188 (44.68%), Postives = 109/188 (57.98%), Query Frame = 0
Query:   58 ELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLTE 245
            +LP  G PE+AF GRSN GKS+L+  L+G  +L R S  PG TR VNYF L    GDA  ++ VDLPGYGYAK  KR V GWN  +EDYL GR +  LRR F+L+DSRHG++  D   L  +  + V    VLTK +K    +L K +E         PA  P +   SA KG+G+      I + ++
Sbjct:   33 DLPDGGLPEIAFAGRSNVGKSSLLNALVGRKQLARTSNTPGRTREVNYFLL----GDA--LWLVDLPGYGYAKAPKREVAGWNRLIEDYLRGRAS--LRRVFLLLDSRHGIKASDRPTLDLMDSSAVSYQAVLTKTDKLKTGELEKVMERTASELARHPAAHPEIIATSAQKGIGLDILRAAILTASQ 212          
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A1G7WQA0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7WQA0_9PROT)

HSP 1 Score: 155 bits (392), Expect = 1.820e-43
Identity = 86/198 (43.43%), Postives = 114/198 (57.58%), Query Frame = 0
Query:   49 YVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLTEK 246
            +V  A+ N +LP AG PE+AF GRSN GKS+LI  L G+  L R S  PG T+ +N+F L      A ++  VDLPGYGYAK  K+ V  WN  + +YL GR  + LRRT VL+D+RHGL+  D  M+  L  A V    VLTK +K  P+ L   L+   Q     PA  P +   SA KG G++E   T+ +L  +
Sbjct:   29 FVRGATKNADLPPAGPPEVAFIGRSNVGKSSLINALTGHNGLARTSVTPGRTQQINFFDL------AGRLTLVDLPGYGYAKAPKKLVESWNGLIRNYLKGR--APLRRTLVLIDARHGLKDSDHAMMDLLDKAAVNYQAVLTKADKIGPTSLATRLKDTAQQLARHPAAHPEIAATSAEKGTGIAELRATLATLASE 218          
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A6M8VVN7_9PROT (Probable GTP-binding protein EngB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VVN7_9PROT)

HSP 1 Score: 154 bits (390), Expect = 3.330e-43
Identity = 81/195 (41.54%), Postives = 111/195 (56.92%), Query Frame = 0
Query:   49 YVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSL 243
            +VT A+    LP    PE+AF GRSN GKS+L+  L G   L R S  PG T+ +N+FA+ +       +  VDLPGYGYAK SK AV+ WN  + DYL  R N  LR  ++L+DSRHGL+ GD++++  L   GV   ++LTK +K    Q+ K +     V    PA  PV H  S+HK  G+ +    +F L
Sbjct:   19 FVTGAATVDALPDTSVPEVAFVGRSNVGKSSLLNALTGQASLARTSHTPGRTQQLNFFAVSDGS-----IRLVDLPGYGYAKASKGAVKSWNNLIRDYLEYRPN--LRHVYILIDSRHGLKEGDKEVMDLLDKMGVAYQIILTKSDKIKKEQMDKVVAATEAVLKKHPAAFPVPHSTSSHKRYGVDDMQRAVFKL 206          
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A2E1XCC7_9PROT (Probable GTP-binding protein EngB n=1 Tax=Parvularcula sp. TaxID=1979207 RepID=A0A2E1XCC7_9PROT)

HSP 1 Score: 154 bits (389), Expect = 4.560e-43
Identity = 87/196 (44.39%), Postives = 114/196 (58.16%), Query Frame = 0
Query:   40 RIQGSLRAEYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSE 235
            R+  + RAE++        LP  G  E+AF GRSN GKSTL+  L G   L RAS  PG TR +NYF L  +      +  VDLPGYGYAK S++ V  W     D+L GR  SVLRR  VLVDSRHGL+  D +++  L +A V   +VLTK +K  P+ L K +E   Q  + +PA  P+V   S+ KG G++E
Sbjct:   17 RLMFARRAEFMLGVVDLDALPDEGPAEVAFAGRSNVGKSTLLNALTGQNGLARASNTPGRTREINYFDLEGA------MRLVDLPGYGYAKASRKDVERWTALTRDFLRGR--SVLRRVCVLVDSRHGLKQTDREVMDLLDEAAVNYQIVLTKTDKIKPTALEKLIEATGQQIMKRPAAHPIVRATSSEKGDGIAE 204          
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A2U1W0M8_9PROT (Probable GTP-binding protein EngB n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1W0M8_9PROT)

HSP 1 Score: 154 bits (388), Expect = 7.890e-43
Identity = 89/206 (43.20%), Postives = 118/206 (57.28%), Query Frame = 0
Query:   40 RIQGSLRAEYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLTE 245
            R+  +   ++V  A    +LP A  PE+AF GRSN GKS+LI  L G   L R S  PG T+ +N+F L   GG   ++  VD+PGYGYAK++K  V  WN  V  +L GRV  VLRR  VL+DSRHGL+  D+++L+ L  A V   +VLTK +K  P  L       L      PA  P VH  S+ KGLG++E   ++  LTE
Sbjct:   24 RLLFAQACDFVWGADALSQLPEATLPEVAFAGRSNVGKSSLINALTGRRTLARTSNTPGRTQQLNFFDL---GG---RLRLVDMPGYGYAKEAKDKVEAWNTLVRRFLKGRV--VLRRALVLIDSRHGLKPNDQEILTMLDQAAVPYQIVLTKADKVKPQALENIRIQTLAALKKHPAAFPEVHVTSSDKGLGIAELRASLAKLTE 221          
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: UPI00082CF604 (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Pseudovibrio hongkongensis TaxID=1647556 RepID=UPI00082CF604)

HSP 1 Score: 152 bits (385), Expect = 1.870e-42
Identity = 87/199 (43.72%), Postives = 113/199 (56.78%), Query Frame = 0
Query:   48 EYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLTEK 246
            +++T  +   +LP  G+ E+AFCGRSN GKS+LI  L G   L R S  PG T+ +N+F       DAP +  VD+PGYGYA+  K  V  W   V DYL GR  + LRR F LVDSRHG++  D +  + L  A V   VVLTK +K  P QL +  E  L     +PA  PVV   S+ KG+GM E   T+  L E+
Sbjct:   24 DFITSVAEVKKLPPLGKLEVAFCGRSNVGKSSLINALTGRKGLARTSNTPGRTQMLNFFGEV----DAP-IDIVDMPGYGYAEAPKNMVDAWTSLVFDYLRGR--ATLRRVFALVDSRHGIKKNDLEAYAILDKAAVPYQVVLTKADKIKPGQLARMKEATLDALKKRPAAHPVVLATSSEKGVGMDEVRATMLQLAEQ 215          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI28_9PHAE8.110e-12873.58EngB-type G domain-containing protein n=2 Tax=Ecto... [more]
A0A835YYM3_9STRA1.230e-6346.22YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema min... [more]
A0A7S3GRN4_9STRA4.420e-4639.83Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A482SLS6_9ARCH6.240e-4642.86Probable GTP-binding protein EngB n=1 Tax=archaeon... [more]
A0A3M1JLX5_9PROT1.110e-4344.68Probable GTP-binding protein EngB n=1 Tax=Alphapro... [more]
A0A1G7WQA0_9PROT1.820e-4343.43Probable GTP-binding protein EngB n=1 Tax=Roseospi... [more]
A0A6M8VVN7_9PROT3.330e-4341.54Probable GTP-binding protein EngB n=1 Tax=Proteoba... [more]
A0A2E1XCC7_9PROT4.560e-4344.39Probable GTP-binding protein EngB n=1 Tax=Parvular... [more]
A0A2U1W0M8_9PROT7.890e-4343.20Probable GTP-binding protein EngB n=1 Tax=Azospiri... [more]
UPI00082CF6041.870e-4243.72ribosome biogenesis GTP-binding protein YihA/YsxC ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019987GTP-binding protein, ribosome biogenesis, YsxCTIGRFAMTIGR03598TIGR03598coord: 47..240
e-value: 1.7E-46
score: 156.2
IPR019987GTP-binding protein, ribosome biogenesis, YsxCHAMAPMF_00321GTPase_EngBcoord: 54..244
score: 21.703506
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 42..246
e-value: 1.5E-39
score: 137.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 62..245
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 67..192
e-value: 4.1E-15
score: 55.9
NoneNo IPR availablePIRSRPIRSR006230-1PIRSR006230-1coord: 68..125
e-value: 0.0013
score: 15.8
NoneNo IPR availablePANTHERPTHR11649MSS1/TRME-RELATED GTP-BINDING PROTEINcoord: 45..243
NoneNo IPR availablePANTHERPTHR11649:SF13GTP-BINDING PROTEIN ENGB-RELATEDcoord: 45..243
IPR030393EngB-type guanine nucleotide-binding (G) domainPROSITEPS51706G_ENGBcoord: 63..246
score: 35.139683
IPR030393EngB-type guanine nucleotide-binding (G) domainCDDcd01876YihA_EngBcoord: 66..244
e-value: 5.60524E-52
score: 164.606

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig18contigP-littoralis_Contig18:316772..317512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig18.70.1mRNA_P-littoralis_Contig18.70.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig18 316772..317512 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig18.70.1 ID=prot_P-littoralis_Contig18.70.1|Name=mRNA_P-littoralis_Contig18.70.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=247bp
MRSRGPLRHLSGQLSVATSSPWVWVAHGVDPTSAICPPSRIQGSLRAEYV
TPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCT
RTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGR
VNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQ
LFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLTEK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019987GTP-bd_ribosome_bio_YsxC
IPR027417P-loop_NTPase
IPR006073GTP-bd
IPR030393G_ENGB_dom