mRNA_P-littoralis_Contig18.70.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A6H5KI28_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI28_9PHAE) HSP 1 Score: 370 bits (951), Expect = 8.110e-128 Identity = 181/246 (73.58%), Postives = 207/246 (84.15%), Query Frame = 1
Query: 1 MRSRGPLRHLSGQLSVATSSPWVWVAHGVDPTSAICPPSRIQG-SLRAEYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLTE 735
MRS R L GQLSVATSSPWVWVA GVDP SAI PP R +G SLR EYV+PAS NHELPTAG PE+AF GRSNQGKSTL+GKLLGNPKLVRASKAPGCT+TVNYFALRE G ++PQ + VDLPGYG+A++SKRAVRGWN AV YL GR +SVLRRTFVLVD RHGLQ DEQMLSFLS V+NMVVLTKV+KASP+QL +SLEG Q+A+H PAT+P+VHC+SAHKG GM EF NT++ +++
Sbjct: 1 MRSSAAFRRLRGQLSVATSSPWVWVATGVDPASAIHPPPRKRGLSLRGEYVSPASFNHELPTAGTPEVAFIGRSNQGKSTLVGKLLGNPKLVRASKAPGCTKTVNYFALREGGAESPQAFLVDLPGYGFARESKRAVRGWNQAVGSYLEGRSSSVLRRTFVLVDGRHGLQPDDEQMLSFLSSRDVENMVVLTKVDKASPAQLVQSLEGAFQLAVHHPATLPIVHCISAHKGQGMGEFQNTLYGVSD 246
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A835YYM3_9STRA (YihA2, YihA/EngB-like GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM3_9STRA) HSP 1 Score: 208 bits (529), Expect = 1.230e-63 Identity = 110/238 (46.22%), Postives = 148/238 (62.18%), Query Frame = 1
Query: 52 TSSPWVWVAHGVDPTSAI--CPPSRIQG--SLRAEYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFAL-------RESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLT 732
T SPWVW G+D SA+ P +G +++A + P +LP AG PE+AFCGRSN GKSTL+G L+ N KLVRASK PGCTRTVNYF L + S D VY VDLPGYG+AK + V+ W AVE ++ R ++LRRTFVL+D RHG++ DE M++ L D GV +VLTK ++ + + +EGV++ A A PVVH +SA G G+ + +TI+ +T
Sbjct: 3 TKSPWVWTMKGMDADSAVHRTDPDIARGCRAMQAGFFPPNLFKFDLPKAGVPEVAFCGRSNVGKSTLVGTLINNTKLVRASKEPGCTRTVNYFGLTAPTRIKKGSEVDRAAVYMVDLPGYGFAKAPVQEVQAWTAAVEGFIVNRDCALLRRTFVLIDGRHGVKQHDEDMMTLLDDHGVSYQIVLTKADQLTKRDIAVVVEGVMRAAARHAACYPVVHVVSARDGHGVLQLLDTIYYVT 240
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A7S3GRN4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GRN4_9STRA) HSP 1 Score: 164 bits (414), Expect = 4.420e-46 Identity = 92/231 (39.83%), Postives = 129/231 (55.84%), Query Frame = 1
Query: 46 VATSSPWVWVAHGVDPTSAIC---PPSRIQGSLRAEYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFAL-RESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQP--ATVPVVHCLSAHKGLGMSEFTNTI 720
V T++ ++ +DP + P ++ S+ Y+ P+ LN+ LPT G PE AF GRSN GKS+LI L+GN KLV SK PGCTR++NY+ L +E G Y+VDLPGYG+A+KSK + W + Y+ R SVLRR FVLVDSR G+ + D M+ L+ + +V TKV+ S +L+ SL V A +P + LS G+ F T+
Sbjct: 37 VQTTTSSIYTTTELDPQYDLTKWGPAAKTLFSMHPSYIHPSELNYGLPTNGVPEFAFVGRSNVGKSSLIDALMGNRKLVNVSKEPGCTRSINYYGLSKEKTGKDYSAYFVDLPGYGFARKSKEEQQKWTNMIHQYVSSRDQSVLRRVFVLVDSRRGINNHDATMMDTLNKTFIPYQIVFTKVDLTSKQELYTSLGQAFSVINSSMGGACLPFIPTLSTVDKTGLDHFKLTM 267
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A482SLS6_9ARCH (Probable GTP-binding protein EngB n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLS6_9ARCH) HSP 1 Score: 163 bits (413), Expect = 6.240e-46 Identity = 87/203 (42.86%), Postives = 125/203 (61.58%), Query Frame = 1
Query: 130 SLRAEYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGG-DAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQP--ATVPVVHCLSAHKGLGMSEFTNTIFSL 729
SL Y+ P+ NH+LP+AGRPE+AF GRSN GKS+L+ LLG L+R SK PGCT T+NY+AL + D Y +D+PGYG+AK +K+ + W V YL R +LRR FVL+DSR G+Q D +M+ L+ A + VVLTK + S ++ + L + V + + +P+VH +SA KGLG+ + +I +
Sbjct: 70 SLNPTYIPPSYFNHQLPSAGRPEVAFVGRSNVGKSSLVEALLGTKGLLRISKEPGCTTTLNYYALAKGSALDDHACYLIDMPGYGFAKIAKQQQKKWLEIVNSYLMNRDQLLLRRVFVLIDSRRGVQMQDVEMMEMLNHAHIPYQVVLTKKDLVSDKEIKEKLFELFCVISRKKNNSCLPLVHVVSALKGLGLEDLRLSIVEI 272
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A3M1JLX5_9PROT (Probable GTP-binding protein EngB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JLX5_9PROT) HSP 1 Score: 155 bits (393), Expect = 1.110e-43 Identity = 84/188 (44.68%), Postives = 109/188 (57.98%), Query Frame = 1
Query: 172 ELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLTE 735
+LP G PE+AF GRSN GKS+L+ L+G +L R S PG TR VNYF L GDA ++ VDLPGYGYAK KR V GWN +EDYL GR + LRR F+L+DSRHG++ D L + + V VLTK +K +L K +E PA P + SA KG+G+ I + ++
Sbjct: 33 DLPDGGLPEIAFAGRSNVGKSSLLNALVGRKQLARTSNTPGRTREVNYFLL----GDA--LWLVDLPGYGYAKAPKREVAGWNRLIEDYLRGRAS--LRRVFLLLDSRHGIKASDRPTLDLMDSSAVSYQAVLTKTDKLKTGELEKVMERTASELARHPAAHPEIIATSAQKGIGLDILRAAILTASQ 212
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A1G7WQA0_9PROT (Probable GTP-binding protein EngB n=1 Tax=Roseospirillum parvum TaxID=83401 RepID=A0A1G7WQA0_9PROT) HSP 1 Score: 155 bits (392), Expect = 1.820e-43 Identity = 86/198 (43.43%), Postives = 114/198 (57.58%), Query Frame = 1
Query: 145 YVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLTEK 738
+V A+ N +LP AG PE+AF GRSN GKS+LI L G+ L R S PG T+ +N+F L A ++ VDLPGYGYAK K+ V WN + +YL GR + LRRT VL+D+RHGL+ D M+ L A V VLTK +K P+ L L+ Q PA P + SA KG G++E T+ +L +
Sbjct: 29 FVRGATKNADLPPAGPPEVAFIGRSNVGKSSLINALTGHNGLARTSVTPGRTQQINFFDL------AGRLTLVDLPGYGYAKAPKKLVESWNGLIRNYLKGR--APLRRTLVLIDARHGLKDSDHAMMDLLDKAAVNYQAVLTKADKIGPTSLATRLKDTAQQLARHPAAHPEIAATSAEKGTGIAELRATLATLASE 218
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A6M8VVN7_9PROT (Probable GTP-binding protein EngB n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VVN7_9PROT) HSP 1 Score: 154 bits (390), Expect = 3.330e-43 Identity = 81/195 (41.54%), Postives = 111/195 (56.92%), Query Frame = 1
Query: 145 YVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSL 729
+VT A+ LP PE+AF GRSN GKS+L+ L G L R S PG T+ +N+FA+ + + VDLPGYGYAK SK AV+ WN + DYL R N LR ++L+DSRHGL+ GD++++ L GV ++LTK +K Q+ K + V PA PV H S+HK G+ + +F L
Sbjct: 19 FVTGAATVDALPDTSVPEVAFVGRSNVGKSSLLNALTGQASLARTSHTPGRTQQLNFFAVSDGS-----IRLVDLPGYGYAKASKGAVKSWNNLIRDYLEYRPN--LRHVYILIDSRHGLKEGDKEVMDLLDKMGVAYQIILTKSDKIKKEQMDKVVAATEAVLKKHPAAFPVPHSTSSHKRYGVDDMQRAVFKL 206
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A2E1XCC7_9PROT (Probable GTP-binding protein EngB n=1 Tax=Parvularcula sp. TaxID=1979207 RepID=A0A2E1XCC7_9PROT) HSP 1 Score: 154 bits (389), Expect = 4.560e-43 Identity = 87/196 (44.39%), Postives = 114/196 (58.16%), Query Frame = 1
Query: 118 RIQGSLRAEYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSE 705
R+ + RAE++ LP G E+AF GRSN GKSTL+ L G L RAS PG TR +NYF L + + VDLPGYGYAK S++ V W D+L GR SVLRR VLVDSRHGL+ D +++ L +A V +VLTK +K P+ L K +E Q + +PA P+V S+ KG G++E
Sbjct: 17 RLMFARRAEFMLGVVDLDALPDEGPAEVAFAGRSNVGKSTLLNALTGQNGLARASNTPGRTREINYFDLEGA------MRLVDLPGYGYAKASRKDVERWTALTRDFLRGR--SVLRRVCVLVDSRHGLKQTDREVMDLLDEAAVNYQIVLTKTDKIKPTALEKLIEATGQQIMKRPAAHPIVRATSSEKGDGIAE 204
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: A0A2U1W0M8_9PROT (Probable GTP-binding protein EngB n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1W0M8_9PROT) HSP 1 Score: 154 bits (388), Expect = 7.890e-43 Identity = 89/206 (43.20%), Postives = 118/206 (57.28%), Query Frame = 1
Query: 118 RIQGSLRAEYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLTE 735
R+ + ++V A +LP A PE+AF GRSN GKS+LI L G L R S PG T+ +N+F L GG ++ VD+PGYGYAK++K V WN V +L GRV VLRR VL+DSRHGL+ D+++L+ L A V +VLTK +K P L L PA P VH S+ KGLG++E ++ LTE
Sbjct: 24 RLLFAQACDFVWGADALSQLPEATLPEVAFAGRSNVGKSSLINALTGRRTLARTSNTPGRTQQLNFFDL---GG---RLRLVDMPGYGYAKEAKDKVEAWNTLVRRFLKGRV--VLRRALVLIDSRHGLKPNDQEILTMLDQAAVPYQIVLTKADKVKPQALENIRIQTLAALKKHPAAFPEVHVTSSDKGLGIAELRASLAKLTE 221
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Match: UPI00082CF604 (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Pseudovibrio hongkongensis TaxID=1647556 RepID=UPI00082CF604) HSP 1 Score: 152 bits (385), Expect = 1.870e-42 Identity = 87/199 (43.72%), Postives = 113/199 (56.78%), Query Frame = 1
Query: 142 EYVTPASLNHELPTAGRPELAFCGRSNQGKSTLIGKLLGNPKLVRASKAPGCTRTVNYFALRESGGDAPQVYYVDLPGYGYAKKSKRAVRGWNLAVEDYLGGRVNSVLRRTFVLVDSRHGLQHGDEQMLSFLSDAGVQNMVVLTKVEKASPSQLFKSLEGVLQVAIHQPATVPVVHCLSAHKGLGMSEFTNTIFSLTEK 738
+++T + +LP G+ E+AFCGRSN GKS+LI L G L R S PG T+ +N+F DAP + VD+PGYGYA+ K V W V DYL GR + LRR F LVDSRHG++ D + + L A V VVLTK +K P QL + E L +PA PVV S+ KG+GM E T+ L E+
Sbjct: 24 DFITSVAEVKKLPPLGKLEVAFCGRSNVGKSSLINALTGRKGLARTSNTPGRTQMLNFFGEV----DAP-IDIVDMPGYGYAEAPKNMVDAWTSLVFDYLRGR--ATLRRVFALVDSRHGIKKNDLEAYAILDKAAVPYQVVLTKADKIKPGQLARMKEATLDALKKRPAAHPVVLATSSEKGVGMDEVRATMLQLAEQ 215 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig18.70.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig18.70.1 >prot_P-littoralis_Contig18.70.1 ID=prot_P-littoralis_Contig18.70.1|Name=mRNA_P-littoralis_Contig18.70.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=247bp MRSRGPLRHLSGQLSVATSSPWVWVAHGVDPTSAICPPSRIQGSLRAEYVback to top mRNA from alignment at P-littoralis_Contig18:316772..317512+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig18.70.1 ID=mRNA_P-littoralis_Contig18.70.1|Name=mRNA_P-littoralis_Contig18.70.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=741bp|location=Sequence derived from alignment at P-littoralis_Contig18:316772..317512+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig18:316772..317512+ >mRNA_P-littoralis_Contig18.70.1 ID=mRNA_P-littoralis_Contig18.70.1|Name=mRNA_P-littoralis_Contig18.70.1|organism=Pylaiella littoralis U1_48|type=CDS|length=741bp|location=Sequence derived from alignment at P-littoralis_Contig18:316772..317512+ (Pylaiella littoralis U1_48)back to top |