mRNA_P-littoralis_Contig179.29.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig179.29.1
Unique NamemRNA_P-littoralis_Contig179.29.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig179.29.1 vs. uniprot
Match: D8LF99_ECTSI (Protein for assembly of pre-ribosomal particles containing 18S rRNA n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF99_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 6.210e-131
Identity = 230/259 (88.80%), Postives = 242/259 (93.44%), Query Frame = 1 
Query:  937 ADDSEAGDSKKAKSVENSKIFLRGLPWDTPDDDVKDFFKACGKIASVEQPKNPDGRSSGTAYVVFDTSASATKAVEMDGQELGGRWLKIMMSFEKPDHARGGEPKPKPEGCTTVFIGNLSWSIDEDTVRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANTDVMGRPIRVDYAAPRAPRDDSFGGGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSPRAKQGIQSFQGTKKSFD 1713
            ADD+E GD+KKAKS ENSKI+LRGLPWDT DDDVKDFFKACGKI +VEQPKNPDGRSSGTAYV FD++A+A KA+E+DGQELGGRWLKIMMSFEKPDHAR GEPK KP GCTTVFIGNLSWSIDEDT+RQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLAN+DVMGRPIRVDYAAPRAPRDDSFGGGG       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF+ RAKQGIQSFQGTKKSFD
Sbjct:  266 ADDAEEGDAKKAKS-ENSKIYLRGLPWDTSDDDVKDFFKACGKIVTVEQPKNPDGRSSGTAYVTFDSAAAAAKAIELDGQELGGRWLKIMMSFEKPDHARNGEPKVKPAGCTTVFIGNLSWSIDEDTIRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANSDVMGRPIRVDYAAPRAPRDDSFGGGG------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFNARAKQGIQSFQGTKKSFD 517
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BLAST of mRNA_P-littoralis_Contig179.29.1 vs. uniprot
Match: A0A7S2V571_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V571_9STRA)

HSP 1 Score: 251 bits (640), Expect = 4.080e-73
Identity = 116/184 (63.04%), Postives = 146/184 (79.35%), Query Frame = 1 
Query:  991 KIFLRGLPWDTPDDDVKDFFKACGKIASVEQPKNPDGRSSGTAYVVFDTSASATKAVEMDGQELGGRWLKIMMSFEKPDHARGGEPKPKPEGCTTVFIGNLSWSIDEDTVRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANTDVMGRPIRVDYAAPRAPRDDSFGGGGG 1542
            K+F++GLPW+T +  +KDFFK  G I S++QP N DGR+SGTAYVVFD++ SA KA+E+DG  +G RW+K++++ + P   + GE   KPEGC TVFIGNLSW IDEDTVRQTFG+CGDIKSVRFAEDRETG FRGFG+V+FYDG+  D AMKL  +D+MGR +R+DY+APR      FGGGGG
Sbjct:  312 KVFMKGLPWETEEYQIKDFFKGIGTIESIDQPLNKDGRASGTAYVVFDSTESAEKALELDGGTVGERWVKLILARDIPPPPKPGE---KPEGCDTVFIGNLSWDIDEDTVRQTFGDCGDIKSVRFAEDRETGRFRGFGYVQFYDGDATDEAMKLNGSDLMGREVRIDYSAPRG-----FGGGGG 487
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BLAST of mRNA_P-littoralis_Contig179.29.1 vs. uniprot
Match: A0A835ZAT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT4_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.610e-68
Identity = 116/207 (56.04%), Postives = 148/207 (71.50%), Query Frame = 1 
Query:  946 SEAGDSKKAKSVEN-------SKIFLRGLPWDTPDDDVKDFFKACGKIASVEQPKNPDGRSSGTAYVVFDTSASATKAVEMDGQELGGRWLKIMMSFEKPDHARGGEP--KPKPEGCTTVFIGNLSWSIDEDTVRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANTDVMGRPIRVDYAAPRAPRDDSFGGGG 1539
            ++   +KKA   E        +KI++RGLPW   +++V+DFFK CG+I S + P + +GR+SGTA+VVF  S +A K+ E        RWLKI+++ E+      G P  K KPEGCTTVFIGNLSW +DED VR  FGECG+I SVRFA DRETG+F+GFGHVEF DGE VDAA+ +A T++ GRP+RVDYAAPRAPR+ SFGGGG
Sbjct:   79 ADGASAKKAPKAEEGVSTGAGTKIYVRGLPWSATEEEVRDFFKECGEIESCDLPTDHNGRASGTAFVVFADSDAANKSRE--------RWLKIVLATERAARPSFGAPDKKDKPEGCTTVFIGNLSWDVDEDAVRAAFGECGEIASVRFATDRETGDFKGFGHVEFVDGEGVDAAIDMAGTEIAGRPVRVDYAAPRAPRE-SFGGGG 276
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BLAST of mRNA_P-littoralis_Contig179.29.1 vs. uniprot
Match: A0A7S2RIH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RIH6_9STRA)

HSP 1 Score: 221 bits (563), Expect = 5.660e-63
Identity = 100/173 (57.80%), Postives = 129/173 (74.57%), Query Frame = 1 
Query:  988 SKIFLRGLPWDTPDDDVKDFFKACGKIASVEQPKNPDGRSSGTAYVVFDTSASATKAVEMDGQELGGRWLKIMMSFEKPDHARGGEPKPKPEGCTTVFIGNLSWSIDEDTVRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANTDVMGRPIRVDYAAPR 1506
            SKIF+RGLPW   +D++++ F  CG+I  VEQP N DGRSSGTA +VF +++SA  AVEM+G + GGRWL I ++ +KP       P  KPEGC T+FIGNLSW IDED+VR+ F ECG+I +VRFAED+ETG+FRGFGHVEF + +    A+ +A TD+MGR +RVDYA  R
Sbjct:  204 SKIFIRGLPWRASEDEIREHFGGCGEIKEVEQPMNSDGRSSGTALIVFGSASSAESAVEMNGGDFGGRWLDIKLADDKPIQTERA-PSEKPEGCLTIFIGNLSWQIDEDSVREAFQECGEITTVRFAEDKETGDFRGFGHVEFANTDSTTQAVAMAGTDIMGRAVRVDYAQDR 375
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BLAST of mRNA_P-littoralis_Contig179.29.1 vs. uniprot
Match: A0A7S3UY59_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UY59_HETAK)

HSP 1 Score: 218 bits (554), Expect = 3.350e-60
Identity = 106/183 (57.92%), Postives = 129/183 (70.49%), Query Frame = 1 
Query:  991 KIFLRGLPWDTPDDDVKDFFKACGKIASVEQPKNPDGRSSGTAYVVFDTSASATKAVEMDGQELGGRWLKIMMSFEKPDHARGGEPKPKPEGCTTVFIGNLSWSIDEDTVRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANTDVMGRPIRVDYAAPRAPRDDSFGGGG 1539
            +IF++GLPW   DD+VK+FFK CG I   + PK+ +GR+SGTAYV F T     KA E+DG   G RWLKI  + E+P  A+ GE   +PEGC TVF GNLSW IDE+++R+ F +CGDI SVRFAEDRETG+FRGFG+V FYDG   D AMKL    V GR IR+DY+APR    D  GGGG
Sbjct:  332 RIFVKGLPWAATDDEVKEFFKDCGTILDCDMPKDHNGRASGTAYVSFSTDDERNKAYELDGATFGERWLKIEEARERPAAAKPGE---RPEGCDTVFCGNLSWDIDEESLREFFKDCGDISSVRFAEDRETGKFRGFGYVSFYDGACTDEAMKLTGQVVAGREIRLDYSAPR----DRSGGGG 507
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BLAST of mRNA_P-littoralis_Contig179.29.1 vs. uniprot
Match: A0A7S3Q248_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q248_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.740e-59
Identity = 96/187 (51.34%), Postives = 132/187 (70.59%), Query Frame = 1 
Query:  961 SKKAKSVENS-----KIFLRGLPWDTPDDDVKDFFKACGKIASVEQPKNPDGRSSGTAYVVFDTSASATKAVEMDGQELGGRWLKIMMSFEKPDHARGGEPKPKPEGCTTVFIGNLSWSIDEDTVRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANTDVMGRPIRVDYAAPR 1506
            SKKA +V +      K+++RGLPW   DD+++++F +CG+I S E P   DGRSSGTA + F T  +  K + ++G++ GGRWL I  + +KP  A   E   KP  C TVF GNLSW++DEDT+R+TF ECG+I S+RFA DRETGEF+GFGH+EF+  +  DAA+ +A TD+MGR +RVDYAA +
Sbjct:  192 SKKAAAVADDDGAGKKMYIRGLPWRATDDELREYFASCGEIVSCELPLQSDGRSSGTAEIEFSTKDACEKCMALNGEDFGGRWLSIKYASDKPAFA-ARETSEKPPDCKTVFCGNLSWNVDEDTLRETFAECGEISSIRFATDRETGEFKGFGHIEFFSSDSTDAAIAMAGTDIMGRAVRVDYAADK 377
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BLAST of mRNA_P-littoralis_Contig179.29.1 vs. uniprot
Match: A0A1Z5KL43_FISSO (Nucleolin n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KL43_FISSO)

HSP 1 Score: 212 bits (540), Expect = 2.610e-58
Identity = 95/175 (54.29%), Postives = 126/175 (72.00%), Query Frame = 1 
Query:  973 KSVENSKIFLRGLPWDTPDDDVKDFFKACGKIASVEQPKNPDGRSSGTAYVVFDTSASATKAVEMDGQELGGRWLKIMMSFEKPDHARGGEPKPKPEGCTTVFIGNLSWSIDEDTVRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANTDVMGRPIRVDYA 1497
            ++ E +K+++RGLPW   + +V++FF ACG I S E P   DGRSSGTA + F+T+  A  A+E++G +  GRWL I  S  KP  +   EP  K +GC TVF+GNL+W +DEDT+RQ FGECG+I SVRFA DRETGEF+GFGH+EF D E  D A+ +A TD++GR +RVDYA
Sbjct:  270 EATEGNKVYVRGLPWKAEEHEVQEFFAACGPIKSCEMPLMDDGRSSGTAIIEFETNEGAAAAIELNGGDFQGRWLSIKYSTPKPILS-AREPTQKQDGCVTVFVGNLAWDVDEDTLRQAFGECGEITSVRFATDRETGEFKGFGHIEFTDTEATDKAIAMAGTDILGRQVRVDYA 443
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BLAST of mRNA_P-littoralis_Contig179.29.1 vs. uniprot
Match: W7TQX9_9STRA (RNA binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQX9_9STRA)

HSP 1 Score: 206 bits (524), Expect = 7.700e-56
Identity = 102/198 (51.52%), Postives = 131/198 (66.16%), Query Frame = 1 
Query:  970 AKSVENSKIFLRGLPWDTPDDDVKDFFKACGKIASVEQPKNPDGRSSGTAYVVFDTSASATKAVEMDGQELG--GRWLKIMMSFEKPDHARGGE-------PKPKPEGCTTVFIGNLSWSIDEDTVRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANTDVMGRPIRVDYAAPRAPRDDSFGGG 1536
            A   E+ K+F++GLPW   +++V+ FF+ CG + SVE P   DGRSSGTAY+VF       KAV M+ +  G  GRW+++           GG+       P  KPEGC +VFIGNLSW+IDE+T+R  F  CG++ SVRFA DRETGEFRGFGHV+F D    +AA+++A T VMGR IRVDYA PR PR+  FGGG
Sbjct:  269 ASPDEDRKVFVQGLPWSATEEEVRAFFQKCGPMTSVELPLK-DGRSSGTAYIVFGEEDGVGKAVAMNEEIFGDSGRWVRVRKYEPTAAGKDGGKGMGFARPPSEKPEGCMSVFIGNLSWNIDEETIRSAFASCGEVTSVRFATDRETGEFRGFGHVDFADETAPEAAVQMAGTPVMGREIRVDYAQPRPPREGGFGGG 465
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BLAST of mRNA_P-littoralis_Contig179.29.1 vs. uniprot
Match: A0A485LH77_9STRA (Aste57867_21298 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LH77_9STRA)

HSP 1 Score: 202 bits (513), Expect = 5.780e-55
Identity = 96/191 (50.26%), Postives = 133/191 (69.63%), Query Frame = 1 
Query:  970 AKSVENSKIFLRGLPWDTPDDDVKDFFKACGKIASVEQPKNPDGRSSGTAYVVFDTSASATKAVEMDGQELGGRWLKIMMSFEKPDHARGGEPKPKPEGCTTVFIGNLSWSIDEDTVRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANTDVMGRPIRVDYAAPRAPRDDSFGGGGG 1542
            A + EN +IF+ GLPW   +D++K  F  CG+I S+  P++ +GRS+GT ++ F T+A+A  A+ +DG + GGRW+KI  S EK +H      + KPEGC ++FIGNLSW+IDEDT+R TF  CG I+SVR A DRETG+FRGFGH++F   E VD A+K+  TDV+GR IRV+++  +      F GGGG
Sbjct:  185 AATSENCEIFIAGLPWVCDEDELKAVFADCGEITSLRLPQDANGRSTGTGFMTFSTAAAAEAAIALDGSDFGGRWMKIR-SAEKKNHV-----EDKPEGCQSIFIGNLSWNIDEDTLRSTFEHCGAIESVRLATDRETGDFRGFGHIDFESSEAVDEAVKMNGTDVLGRAIRVNFSEKK-----QFNGGGG 364
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BLAST of mRNA_P-littoralis_Contig179.29.1 vs. uniprot
Match: A0A8K1CLK3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLK3_PYTOL)

HSP 1 Score: 201 bits (512), Expect = 2.690e-54
Identity = 104/193 (53.89%), Postives = 133/193 (68.91%), Query Frame = 1 
Query:  967 KAKSVENSKIFLRGLPWDTPDDDVKDFFKACGKIASVEQPKNPDGRSSGTAYVVFDTSASATKAVEMDGQELGGRWLKIMMSFEKPDHARGGEPKPKPEGCTTVFIGNLSWSIDEDTVRQTFGECGDIKSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANTDVMGRPIRVDYAAPRAPRDDSFGGGGGR 1545
            +AKS E   IF+ GLPW   +D+V++ F  CG++ SV  P+  +GR+SG A+VVF T+ +AT A+ +DGQ+ GGRW+KI  + +K         + KPEGCT+VFIGNLSW +DEDT+RQ FGECG+I S R A DRETGEFRGFGH++F   E VD A+KLA T V GR IRV YA  R    +   GGGGR
Sbjct:  254 EAKSTE---IFIAGLPWAATEDEVRERFAECGEVVSVRLPQI-NGRASGNAFVVFKTAEAATAALGLDGQDFGGRWMKIRTAEKKNMF------EEKPEGCTSVFIGNLSWDVDEDTIRQAFGECGEITSCRLATDRETGEFRGFGHLDFASTEAVDEAIKLAGTYVGGRAIRVTYAKSR----EQHNGGGGR 432
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig179.29.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF99_ECTSI6.210e-13188.80Protein for assembly of pre-ribosomal particles co... [more]
A0A7S2V571_9STRA4.080e-7363.04Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A835ZAT4_9STRA1.610e-6856.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RIH6_9STRA5.660e-6357.80Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S3UY59_HETAK3.350e-6057.92Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3Q248_9STRA1.740e-5951.34Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Z5KL43_FISSO2.610e-5854.29Nucleolin n=2 Tax=Fistulifera solaris TaxID=151956... [more]
W7TQX9_9STRA7.700e-5651.52RNA binding protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A485LH77_9STRA5.780e-5550.26Aste57867_21298 protein n=1 Tax=Aphanomyces stella... [more]
A0A8K1CLK3_PYTOL2.690e-5453.89Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig179contigP-littoralis_Contig179:123508..128821 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LF99
PFAMsRRM_1,zf-CCHC
Model size1718
Max annot lvl2759|Eukaryota
KEGG koko:K11294,ko:K12741,ko:K12885
KEGG Pathwayko03040,ko05130,map03040,map05130
Hectar predicted targeting categoryother localisation
Exons8
Evalue1.02e-131
EggNOG OGsKOG0118@1|root,KOG0118@2759|Eukaryota
Ec32 ortholog descriptionProtein for assembly of pre-ribosomal particles containing 18S rRNA
Ec32 orthologEc-01_004160.1
DescriptionRNA binding
Cds size1716
COG categoryH
BRITEko00000,ko00001,ko03009,ko03019,ko03036,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig179.29.1prot_P-littoralis_Contig179.29.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig179 123508..128821 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789857.2260444-CDS-P-littoralis_Contig179:123507..1239181680789857.2260444-CDS-P-littoralis_Contig179:123507..123918Pylaiella littoralis U1_48CDSP-littoralis_Contig179 123508..123918 +
1680789857.2369657-CDS-P-littoralis_Contig179:124756..1248431680789857.2369657-CDS-P-littoralis_Contig179:124756..124843Pylaiella littoralis U1_48CDSP-littoralis_Contig179 124757..124843 +
1680789857.2459326-CDS-P-littoralis_Contig179:125154..1253971680789857.2459326-CDS-P-littoralis_Contig179:125154..125397Pylaiella littoralis U1_48CDSP-littoralis_Contig179 125155..125397 +
1680789857.2577753-CDS-P-littoralis_Contig179:125751..1259191680789857.2577753-CDS-P-littoralis_Contig179:125751..125919Pylaiella littoralis U1_48CDSP-littoralis_Contig179 125752..125919 +
1680789857.2687025-CDS-P-littoralis_Contig179:127050..1271101680789857.2687025-CDS-P-littoralis_Contig179:127050..127110Pylaiella littoralis U1_48CDSP-littoralis_Contig179 127051..127110 +
1680789857.2818-CDS-P-littoralis_Contig179:127496..1278381680789857.2818-CDS-P-littoralis_Contig179:127496..127838Pylaiella littoralis U1_48CDSP-littoralis_Contig179 127497..127838 +
1680789857.2950814-CDS-P-littoralis_Contig179:128182..1283561680789857.2950814-CDS-P-littoralis_Contig179:128182..128356Pylaiella littoralis U1_48CDSP-littoralis_Contig179 128183..128356 +
1680789857.309926-CDS-P-littoralis_Contig179:128590..1288211680789857.309926-CDS-P-littoralis_Contig179:128590..128821Pylaiella littoralis U1_48CDSP-littoralis_Contig179 128591..128821 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig179.29.1

>prot_P-littoralis_Contig179.29.1 ID=prot_P-littoralis_Contig179.29.1|Name=mRNA_P-littoralis_Contig179.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=572bp
QRDSPTPITHWLLLTTSRYSTITTPVQHHCTYLSTFTPIKIMGKDKVSKK
SEGSSKKAKKSAAAVVVVAKAVPVVVKKGKASKADKKKKGIKEEVKVDKK
ANKKADKKAKKAKKVAPPPPPSSSSEEESSDEESEEEVKPKVVAKAVTKD
ESSDEDSSSEEESSEEEKPKAKAAPVKATPAKKAESSDDDDSSDDDSDDS
DDSDDSDDSDDKEAALKAAAAAAAKKAKESSSEESSDDDSSDEEEEKPKA
KAKAAAKKTESSDDDSSSEEESDEEEKPKPKAAAAAAKAEESSSEEESSD
DEEEEKPSKKRKADDSEAGDSKKAKSVENSKIFLRGLPWDTPDDDVKDFF
KACGKIASVEQPKNPDGRSSGTAYVVFDTSASATKAVEMDGQELGGRWLK
IMMSFEKPDHARGGEPKPKPEGCTTVFIGNLSWSIDEDTVRQTFGECGDI
KSVRFAEDRETGEFRGFGHVEFYDGEHVDAAMKLANTDVMGRPIRVDYAA
PRAPRDDSFGGGGGRGGGRGGGRGGGGGGRGGGGGGRGGGRGGGRGGGGG
GFSPRAKQGIQSFQGTKKSFD*
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mRNA from alignment at P-littoralis_Contig179:123508..128821+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig179.29.1 ID=mRNA_P-littoralis_Contig179.29.1|Name=mRNA_P-littoralis_Contig179.29.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5314bp|location=Sequence derived from alignment at P-littoralis_Contig179:123508..128821+ (Pylaiella littoralis U1_48)
CAGCGCGACTCCCCCACACCAATCACACATTGGCTCCTTCTGACCACCTC
AAGATACTCGACGATAACCACACCAGTCCAGCACCACTGCACGTACCTCT
CGACCTTTACTCCTATCAAAATCATGGGAAAGGACAAGGTCTCGAAGAAG
TCGGAGGGAAGCTCCAAGAAGGCCAAGAAGTCGGCAGCAGCAGTGGTGGT
GGTGGCCAAGGCTGTTCCCGTTGTGGTGAAGAAGGGCAAGGCCTCCAAGG
CAGACAAGAAGAAGAAGGGCATCAAGGAGGAGGTCAAGGTCGACAAGAAG
GCAAATAAGAAGGCTGACAAGAAAGCCAAGAAGGCGAAGAAGGTTGCCCC
GCCACCGCCGCCCTCCAGCTCCTCGGAGGAGGAGTCTTCGGACGAGGAGA
GCGAGGAAGAGGTGAGACAAAGGAGACATGATAGTTCAGATCCTCTCCGT
CAGAGCGAACAACGAGGCCAAACGAGCGAGATAGCGGTAGGCGTGCGCGC
GCGCAGCGTTTTCATCCACAGGGTTCCATGCTCTGGTGTCGTGAGTATGG
GCTTGGCCTGGAAGAGGGTGGCAAAGAAACAGCACTTCAAAAAAGAAGAG
GGCTGGTTTTTTTAACCGGTGAAAGAGAGACGCTCACACCCACTCAAAAC
ATCCTGATTTGAAATCTTTCTCCCTCTCAATACAGCATTACGACGCAGCT
CATGTTTTTTTGGCAAGTTGAAAGCGATACGTTTATACTTCGAAGTATAC
AGCAGATCGATTCCCTTTTGAGTCAGAGAAAGATCAATAAAGCAAAGCTT
TGCAGTTGTTCTCTACCGCGGATGGCTCACCGTGTACAGATAGTGCTGCC
TCGTTGGCCCTTGTGAACTAAACTATTATGTGGTGGCTTGTGTTCCATGT
CGGGACATGCAAGTGACAGCATATCATGGATTCCAACATATCGGTGGCTG
TCACACCGCCGTTTTGTTCAGCGAAACATCAACCACACAAAACTCAAAAA
TGCGGTATCGTATCCCGTATCGTATCCCGAGAGTTGATGCCTGCAAACTG
AGAAAGGAAGGGAGAGAGAGACAAGCCGTGCAGTCAAAACAGGTTTGCGG
CGGGCGACGTCAAGAAGGTTGCGAATCGTACAGAAGTGGAAAGGACCACC
GTCGGCGGCGGTTTTACTGTCTTGTGTTGAGGACAGTTGGTGTGGCGGTG
GAGTGTTTTATTGCAAAACGCGGCGTGATTTCCAACATGTCAACCTCAGG
TGAAGCCGAAGGTCGTTGCGAAGGCGGTGACCAAGGACGAGAGCAGTGAC
GAGGACAGTTCTTCCGAGGAGGAGTCCTCAGAGGAGGTCAGTAATGTTGC
TTGAATCATTTCTCGTCTCAACGCCACGTGCACGCCCTTTTTTGTACCAG
CAACAGAAATCTAAATGTGAGGGAGACGGCACCGAGCTGTGGACTTCGCT
ATCGTAAAAGGCGGTCAAGCCTCAGATTCACAAACATCAGTTTGCAAGAA
AAATATCAAAATTCATATTTCACCGCCGATTTTTGTTCGTTTTAAGGAGT
CGAGTTGATTTGAACATAACGTCGACCCCGAAGACGCATAATATTGATCC
AACGTGACCTGGCGCCGACAACCAACCCAAATAACAAATGTCAACAGGAA
AAGCCTAAGGCCAAGGCCGCCCCCGTCAAGGCCACCCCCGCGAAGAAAGC
CGAATCAAGCGATGACGACGACAGCAGCGACGATGACAGTGATGACAGTG
ATGACAGCGATGATAGCGACGACAGCGACGACAAGGAGGCGGCCCTAAAA
GCTGCTGCTGCTGCCGCTGCAAAGAAGGCGAAAGAGAGCTCATCTGAGGA
GAGCTCCGACGACGACTCTTCGGATGAAGAGGAAGAGAAGGTATGTCTTT
TGTTTGATGCCGAGAAGGTTGTCTCAAGAAACGGGGGTCGATGGGAACAA
TGTGGTGCAAAGCGGGATCTTGCGTACAAGGTTTCCGGGTTGGGTCAAAG
GACAGTCGGCTTCTTGGTGTCAACAAAGGCAGGTGGTTTGCCCTTGTTTT
CTCTTTTATACGAGAGGCGAAAACATATTTAACTAAACCCTGCTGTGCTC
TTGTCTTAACTTGGAAAATGAAGCGGCTGTTGTTCTCTTCACGAAAAGCA
CACGAGATGAGAGCAACCGGCCCTCATTCCTTATTTTTATTTTTCACGCT
TGATTTCCCTCATCTGTTGCCGCGACGCACACACGCATTTACAGCCCAAG
GCAAAGGCGAAGGCGGCCGCCAAGAAGACCGAGAGCTCGGACGACGACTC
TTCCTCCGAGGAGGAATCCGACGAAGAAGAAAAGCCGAAGCCTAAGGCCG
CCGCCGCCGCCGCTAAGGCCGAGGAGTCCTCTTCCGAGGAAGAATCTTCC
GACGATGAGGAGGTGAGGAAGCCGGAGTGAAGAGTGGAAGAAGGGGAGGT
TGTGAGGTGATCAAGCTGGCACATTTGACTGCTCTTTTCTTGAGACTTGA
CTGCGGAAACATGAGGGCTTGGAGGGGCGGCGTTTCGAGCATACTTCACA
ACAGAGTAGAGTGAGGGCGGGTGAATGGAGGGGCGTGCTTGGACTCACGA
CTTCGTGGGCTTGCGGCTCGCGTACGCACGCACGCCCTCCCTTGTTATAT
CCGATACATCCGCATTAATTGTGTTTGTTTTGTGGTGGCGTCTGTGTGGG
ATCCCTTGATTACAAATCTATGCACCACTCCAGAAGGCGAACGTGTGGAA
AAAACACCTGATCACCATCTTTCGTATGAGGGTCCCACCCACCAAAAAAC
AACAGTGAAAACACAGGCGCCGATCGCACGCACAACGCGACGTTGCAGCA
AGTAGATGAAACATTTTGTTTGAACTAAAATAAGTACGGTTTGCTAAAGA
GCGTGTGTGTACATCGTGGATCAAACTGGTGTGCTTTGCACGTAATGTTG
TACTCGAACCAAATTGGTTGTATCGGAGGTAGGCGCTTAGATTAGGTGAT
TATGTCCTGTCCTGTACAAGCAAGTCCTGTGATATCAACATACTTGAAAT
ACCGAAGCAGCGGAGTTGCCCTTTGCGGCAGCAGCGCATTCGTGTGGCAA
CGAATCGCTACGTATGAGGACTTGCGCTACCAGTTGACACGAAGATAACC
ACCAACCTTCCTTGCGTGTCTTGAAACTTGCATAATTTTTTTTCATGTTT
TTGATTTATGTTTCAACAATACTTCTTTGGTTGTGCCTTTGGCGGTCCCC
TGACTACGATTCTTTGCACGACTCAAGAAGGGGAATGTGTGCATAAAACA
CCTGATCACCATCTTTCGTATGAGGGCCGGCCAGAGACTGAATGAATCCA
TGATGCGGGCCGATTTCAAGGCTATCACGAAGCACGACGGCTTCAAGTAT
CACACCCGACCTCGGGGCCGGGATAATCGTTTATAATGGGGGTGGTTTGC
GATATTTGTTCTGTGTTTCCCATCCAGTTTGTCTTTAGTAGGACGTCATG
CTTATGCTGACCGGTGTTAAAACCCTTTTTTCGCCCCCTGCAGGAAGAGA
AGCCCTCCAAGAAGCGAAAGGCGGACGACTCGGAGGCGGGCGACTCCAAG
AAGGTACGTCCGGGTAACGTTTAATTTTGACATCTTATGTTGTGGTTTTG
TCGCCTGGAGTTTACCTACAACACGGTGTGAACAAGTTGTGAGGAGCGCG
CGAGACATTTTGTGAGGGCAACCACAGATTGATTTTCATGAGGTGTCTAC
GACCGCATTTATTTTACTGCCAATCCCGAAACGTCACCAGTAGGGGGATT
CGTCGTGTCCCTTCGAATTGAATCGTCCTGGTTCGATTCTTCATCGGGTA
CGCACGCACGCACTCTGTAGAGCCTTTCTTTTTTCACTCCCTATATCCCT
CCTGTATCAACCAGATCACGACCCAACCTGACGTATTGAACGAACTTCGG
AACTCGCGTGCACGACTTTTATATGTACGCGCACCGCAGGCAAAGAGCGT
GGAGAACAGCAAGATTTTCCTCCGCGGTCTGCCCTGGGACACCCCGGACG
ATGACGTGAAGGACTTCTTCAAGGCCTGCGGCAAGATCGCGAGCGTGGAG
CAACCCAAGAACCCCGATGGGCGCTCGAGCGGCACGGCCTACGTCGTGTT
CGATACCAGCGCCTCGGCCACGAAGGCGGTGGAGATGGACGGGCAGGAGC
TCGGCGGGCGGTGGCTCAAGATTATGATGTCCTTCGAAAAGCCGGACCAC
GCACGTGGAGGGGAGCCCAAGCCGAAGCCCGAGGGCTGCACCACTGTTTT
CATCGGAAACTTGTCGTGGTCCATCGATGAGGTATGTTTGCTGCGTGTGC
GTTTTTTTTCTGCTGCTGGTGCCCTCGTGCGTTGTTGCAAGTGTAAGATC
GCGGGTGAACTACACCCAGACCACGGCTTGATGGGCGGCTGTCTCATTTT
CCCTTGTCTTGTTGTGGACGTTCCAGTTTTTTTTTTTCAAAATGCGTGTA
GGTCCGTGTTCCGTGTCCCTTCAACAAGTTCGTTCGGAGATTGAGTTGGG
TCTTCTGATGGCCGCGACAGTTGCTTTGAAGAGTTGCCTCTCGGTGCCGT
CCAAGGTCGTGCTTCCTCCTAATTCTTACACCCATCCATCTGTGTGAATT
CGTGGCATGAACATACAATCTGCAGGACACGGTACGGCAGACGTTCGGCG
AATGCGGTGATATCAAGAGTGTCCGCTTCGCCGAGGATAGGGAGACGGGA
GAGTTCCGGGGCTTTGGGCACGTGGAGTTTTACGACGGCGAACACGTCGA
TGCCGCGATGAAGCTCGCCAACACCGATGTCATGGGCCGACCCATTCGTG
TGAGTTTTCCGCCACGTCTGCTTGACACGTGTTGCCTCTTCTGTTGACAT
GTGACGATGAATCTTCCTGTTTTGACGTCGAAATCGGGCCGCACTCCGCT
TATTTGGAAGAGCACGAAAAATTGAATGTTCTTCGACAGGCCATCAGCCT
CCAACCCACCAACACGAAACACGAACACGTTTTCTTTAATTTCACGTGAG
CTCCTCTCTGTCGACGTGAATCGGAACTATTAGGTCGACTACGCGGCTCC
GCGCGCTCCTCGCGATGACTCGTTCGGTGGCGGTGGAGGTCGTGGCGGTG
GTCGCGGAGGTGGCAGGGGAGGCGGCGGCGGTGGACGCGGGGGTGGGGGC
GGGGGGCGAGGTGGTGGTAGGGGTGGTGGTCGCGGCGGGGGAGGGGGGGG
GTTCAGCCCGCGTGCGAAACAGGGCATCCAGTCGTTCCAGGGCACCAAGA
AGTCCTTTGACTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig179:123508..128821+

>mRNA_P-littoralis_Contig179.29.1 ID=mRNA_P-littoralis_Contig179.29.1|Name=mRNA_P-littoralis_Contig179.29.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1716bp|location=Sequence derived from alignment at P-littoralis_Contig179:123508..128821+ (Pylaiella littoralis U1_48)
CAGCGCGACTCCCCCACACCAATCACACATTGGCTCCTTCTGACCACCTC
AAGATACTCGACGATAACCACACCAGTCCAGCACCACTGCACGTACCTCT
CGACCTTTACTCCTATCAAAATCATGGGAAAGGACAAGGTCTCGAAGAAG
TCGGAGGGAAGCTCCAAGAAGGCCAAGAAGTCGGCAGCAGCAGTGGTGGT
GGTGGCCAAGGCTGTTCCCGTTGTGGTGAAGAAGGGCAAGGCCTCCAAGG
CAGACAAGAAGAAGAAGGGCATCAAGGAGGAGGTCAAGGTCGACAAGAAG
GCAAATAAGAAGGCTGACAAGAAAGCCAAGAAGGCGAAGAAGGTTGCCCC
GCCACCGCCGCCCTCCAGCTCCTCGGAGGAGGAGTCTTCGGACGAGGAGA
GCGAGGAAGAGGTGAAGCCGAAGGTCGTTGCGAAGGCGGTGACCAAGGAC
GAGAGCAGTGACGAGGACAGTTCTTCCGAGGAGGAGTCCTCAGAGGAGGA
AAAGCCTAAGGCCAAGGCCGCCCCCGTCAAGGCCACCCCCGCGAAGAAAG
CCGAATCAAGCGATGACGACGACAGCAGCGACGATGACAGTGATGACAGT
GATGACAGCGATGATAGCGACGACAGCGACGACAAGGAGGCGGCCCTAAA
AGCTGCTGCTGCTGCCGCTGCAAAGAAGGCGAAAGAGAGCTCATCTGAGG
AGAGCTCCGACGACGACTCTTCGGATGAAGAGGAAGAGAAGCCCAAGGCA
AAGGCGAAGGCGGCCGCCAAGAAGACCGAGAGCTCGGACGACGACTCTTC
CTCCGAGGAGGAATCCGACGAAGAAGAAAAGCCGAAGCCTAAGGCCGCCG
CCGCCGCCGCTAAGGCCGAGGAGTCCTCTTCCGAGGAAGAATCTTCCGAC
GATGAGGAGGAAGAGAAGCCCTCCAAGAAGCGAAAGGCGGACGACTCGGA
GGCGGGCGACTCCAAGAAGGCAAAGAGCGTGGAGAACAGCAAGATTTTCC
TCCGCGGTCTGCCCTGGGACACCCCGGACGATGACGTGAAGGACTTCTTC
AAGGCCTGCGGCAAGATCGCGAGCGTGGAGCAACCCAAGAACCCCGATGG
GCGCTCGAGCGGCACGGCCTACGTCGTGTTCGATACCAGCGCCTCGGCCA
CGAAGGCGGTGGAGATGGACGGGCAGGAGCTCGGCGGGCGGTGGCTCAAG
ATTATGATGTCCTTCGAAAAGCCGGACCACGCACGTGGAGGGGAGCCCAA
GCCGAAGCCCGAGGGCTGCACCACTGTTTTCATCGGAAACTTGTCGTGGT
CCATCGATGAGGACACGGTACGGCAGACGTTCGGCGAATGCGGTGATATC
AAGAGTGTCCGCTTCGCCGAGGATAGGGAGACGGGAGAGTTCCGGGGCTT
TGGGCACGTGGAGTTTTACGACGGCGAACACGTCGATGCCGCGATGAAGC
TCGCCAACACCGATGTCATGGGCCGACCCATTCGTGTCGACTACGCGGCT
CCGCGCGCTCCTCGCGATGACTCGTTCGGTGGCGGTGGAGGTCGTGGCGG
TGGTCGCGGAGGTGGCAGGGGAGGCGGCGGCGGTGGACGCGGGGGTGGGG
GCGGGGGGCGAGGTGGTGGTAGGGGTGGTGGTCGCGGCGGGGGAGGGGGG
GGGTTCAGCCCGCGTGCGAAACAGGGCATCCAGTCGTTCCAGGGCACCAA
GAAGTCCTTTGACTAG
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