mRNA_P-littoralis_Contig178.97.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Match: D7FIX8_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX8_ECTSI) HSP 1 Score: 165 bits (417), Expect = 3.310e-47 Identity = 90/154 (58.44%), Postives = 110/154 (71.43%), Query Frame = 3
Query: 432 LLEAQIELAAAGDKVAASADALAAVYGPDVAAGKDDLVVELSVRGRRMTTLLSTLQACPESFLATKFNEDRWPATDKDVDEHGRRLIDCSPSVFAKILDVLRMRKRAAWAGTALQPGCDELVCVIIKAGDRDSFEKFVEKRFPGDLQSFMMDCV 893
L EA IEL+ A + A A ALAAVYGPDVA G+++ VVELSVRG M TL STL+ CP S LA +F+ED+WPA KDVD +GRR+IDC PSVF+K+LDVLRM KR WA G +E V IKAGDR +FE+FV+ F G +SF+M+ V
Sbjct: 7 LQEAGIELSPAKARTTACATALAAVYGPDVANGQEEDVVELSVRGTEMMTLRSTLRICPSSALAARFDEDKWPAAKKDVDSNGRRVIDCKPSVFSKVLDVLRMAKRVRWADDEKLEGMNETPRVTIKAGDRFAFEEFVDMYFKG-CESFIMEHV 159
BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI) HSP 1 Score: 174 bits (441), Expect = 9.150e-47 Identity = 97/154 (62.99%), Postives = 111/154 (72.08%), Query Frame = 3
Query: 432 LLEAQIELAAAGDKVAASADALAAVYGPDVAAGKDDLVVELSVRGRRMTTLLSTLQACPESFLATKFNEDRWPATDKDVDEHGRRLIDCSPSVFAKILDVLRMRKRAAWAGTALQPGCDELVCVIIKAGDRDSFEKFVEKRFPGDLQSFMMDCV 893
L +A+ EL A K AAS DALAAVYGP+VA G D VVELSVRG RMTTL STLQAC ES LA FNED+WP TDKDVDE GRRLI+CSP+VF K+LDVLRMRKRAAWA + EL V + A DR +F+ FV FPG ++F+ D V
Sbjct: 399 LHQAEAELEQAHSKAAASGDALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLQACRESALAALFNEDKWPPTDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDR-----ELAHVRVDAADRPAFDSFVNMYFPG-FENFITDMV 546
BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE) HSP 1 Score: 167 bits (424), Expect = 1.940e-44 Identity = 94/154 (61.04%), Postives = 109/154 (70.78%), Query Frame = 3
Query: 432 LLEAQIELAAAGDKVAASADALAAVYGPDVAAGKDDLVVELSVRGRRMTTLLSTLQACPESFLATKFNEDRWPATDKDVDEHGRRLIDCSPSVFAKILDVLRMRKRAAWAGTALQPGCDELVCVIIKAGDRDSFEKFVEKRFPGDLQSFMMDCV 893
L +A+ EL A K A S ALAAVYGP+VA G D VVELSVRG RMTTL STL+AC ES LA FNED+WPATDKDVDE GRRLI+CSP+VF K+LDVLRMRKRAAWA + E V + A DR +F+ FV FPG ++F+ D V
Sbjct: 377 LYQAEAELEHAHSKAAVSGRALAAVYGPEVARGAIDTVVELSVRGTRMTTLRSTLRACRESALAALFNEDKWPATDKDVDEQGRRLINCSPAVFQKVLDVLRMRKRAAWAASDR-----ESAHVRVDAADRPAFDSFVNMFFPG-FENFITDMV 524
BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Match: A0A6H5JCR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR8_9PHAE) HSP 1 Score: 163 bits (413), Expect = 6.460e-43 Identity = 97/159 (61.01%), Postives = 111/159 (69.81%), Query Frame = 3
Query: 432 LLEAQIELAAAGDKVAASADALAAVYGPDVAAGKDDLVVELSVRG----RRMTTLLSTLQACPESFLATKFNEDRWPATDKDVDEHGRRLI-DCSPSVFAKILDVLRMRKRAAWAGTALQPGCDELVCVIIKAGDRDSFEKFVEKRFPGDLQSFMMDCV 893
L AQ EL A AAS +ALAAVYGP++AAG +D VVELSVRG RMTTLLSTLQACPES LA +F+E +WP TDK+ D HGRR+I DCSP VFAK+LDVLRM+KR AWA + V V IKA DR FEKFV FP +SF+MD V
Sbjct: 367 LHTAQRELVKANTIAAASVEALAAVYGPNIAAGVEDRVVELSVRGPRKTERMTTLLSTLQACPESALAARFDEAKWPVTDKEKDAHGRRVIKDCSPLVFAKVLDVLRMKKREAWADDDKKVRA--AVLVAIKAADRAPFEKFVNMYFPA-CESFIMDSV 522
BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI) HSP 1 Score: 162 bits (410), Expect = 2.050e-42 Identity = 96/159 (60.38%), Postives = 110/159 (69.18%), Query Frame = 3
Query: 432 LLEAQIELAAAGDKVAASADALAAVYGPDVAAGKDDLVVELSVRG----RRMTTLLSTLQACPESFLATKFNEDRWPATDKDVDEHGRRLI-DCSPSVFAKILDVLRMRKRAAWAGTALQPGCDELVCVIIKAGDRDSFEKFVEKRFPGDLQSFMMDCV 893
L AQ EL A AAS ALAAVYGP AAG D +VELSVRG RMTTLLSTLQACPES LA +F+E +WP T+KD D HGRR++ DCSPSVF+K+LDVLRM+KR AWAG + G V V IK DR FE+FV FPG +SF+MD V
Sbjct: 375 LHTAQRELVQANTMAAASLKALAAVYGPHTAAGVKDPIVELSVRGSRTTERMTTLLSTLQACPESALAARFDEAKWPVTEKDKDAHGRRVMKDCSPSVFSKVLDVLRMKKREAWAGDDGKMGA--AVLVAIKDADRAPFEEFVNMYFPG-CESFIMDSV 530
BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE) HSP 1 Score: 159 bits (401), Expect = 6.760e-41 Identity = 88/151 (58.28%), Postives = 109/151 (72.19%), Query Frame = 3
Query: 432 LLEAQIELAAAGDKVAASADALAAVYGPDVAAGKDDLVVELSVRGRRMTTLLSTLQACPESFLATKFNEDRWPATDKDVDEHGRRLIDCSPSVFAKILDVLRMRKRAAWAGTALQPGCDELVCVIIKAGDRDSFEKFVEKRFPGDLQSFMM 884
L +A IELA A + A A ALAAVYGPDVA+G+ + VVELSVRG MTTL STL+ CP+S LA +F+E +WPA KD+D GRR+IDC P+VF+K+LDVLR+ KRAAWAG G E V IK GDR +FE+FV+ F G +SF+M
Sbjct: 419 LQDAGIELALAKARTTACATALAAVYGPDVASGQQEDVVELSVRGTAMTTLRSTLRVCPDSALAARFDEGKWPAAKKDLDSDGRRMIDCRPAVFSKVLDVLRIAKRAAWAGGENLQGMKE-TRVTIKPGDRVAFEEFVDMYFKG-CESFIM 567
BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI) HSP 1 Score: 154 bits (388), Expect = 2.320e-39 Identity = 87/158 (55.06%), Postives = 112/158 (70.89%), Query Frame = 3
Query: 432 LLEAQIELAAAGDKVAASADALAAVYGPDVAAGKDDLVVELSVRGRRMTTLLSTLQACPESFLATKFNEDRWPATDKDVDEHGRRLIDCSPSVFAKILDVLRMRKRAAWAGTALQPGCDEL----VCVIIKAGDRDSFEKFVEKRFPGDLQSFMMDCV 893
L EA EL+ A + A A A+AAVYGP+VA G +D VVEL+VRG RMTTL STL+ CP+S LA FNE++WP +KD+D +GRR+IDC PSVF+K+LDVLR+ KRAAWA + P +E V IKAGD +FE+FV+ FP ++FMM+ V
Sbjct: 362 LQEAANELSLAKARTMACATAVAAVYGPEVATGTEDDVVELNVRGTRMTTLRSTLRICPDSALAAWFNEEQWPVAEKDLDSNGRRIIDCKPSVFSKVLDVLRIAKRAAWARSEEGPVRNEKRRVKPRVTIKAGDCAAFEEFVDMYFPC-CETFMMEHV 518
BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Match: A0A6H5JQU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQU4_9PHAE) HSP 1 Score: 149 bits (377), Expect = 6.740e-37 Identity = 77/136 (56.62%), Postives = 100/136 (73.53%), Query Frame = 3
Query: 486 ADALAAVYGPDVAAGKDDLVVELSVRGRRMTTLLSTLQACPESFLATKFNEDRWPATDKDVDEHGRRLIDCSPSVFAKILDVLRMRKRAAWAGTALQPGCDELVCVIIKAGDRDSFEKFVEKRFPGDLQSFMMDCV 893
A ALAAVY PD+A G + +ELSVRG RMTTL STL+ CP+S LAT+F+ED+WPA KD+D +GRR+IDC P+VF+K+LDVLRM RA+WAG+ +E V +K GDR +FE+FV FPG +S ++D V
Sbjct: 274 ATALAAVYCPDMAMGLEVDFMELSVRGTRMTTLRSTLRVCPDSALATRFDEDKWPAAKKDLDSNGRRVIDCKPAVFSKVLDVLRMATRASWAGSEKSQQVNEKPRVTMKVGDRVAFEEFVGMNFPG-CESCILDFV 408
BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Match: D7FSV1_ECTSI (Potassium channel tetramerisation domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSV1_ECTSI) HSP 1 Score: 135 bits (341), Expect = 4.810e-34 Identity = 76/146 (52.05%), Postives = 96/146 (65.75%), Query Frame = 3
Query: 480 ASADALAAVYGPDVAAGKDDLVVELSVRGRRMTTLLSTLQACPESFLATKFNEDRWPATDKDVDEHGRRLIDCSPSVFAKILDVLRMRKRAAWA--------GTALQPGCDELVCVIIKAGDRDSFEKFVEKRFPGDLQSFMMDCV 893
A+ +AL VYGPD+A+GK D VVELSVRG RMTTL STL ACP+S T FN + W T+KD+D+HGRR++DC P+VFAK+LDVLRM+K A WA G +P V V ++ DR E+ K FPG + F+MD V
Sbjct: 178 AALEALTNVYGPDIASGKKDEVVELSVRGVRMTTLRSTLTACPDSVFTTWFNGN-WKPTEKDLDKHGRRMLDCKPAVFAKVLDVLRMKKWAGWAPSEDAGGGGVVAKP-----VPVAVRPADRACLEELGNKYFPG-CERFIMDLV 316
BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Match: A0A6H5JLT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT7_9PHAE) HSP 1 Score: 133 bits (334), Expect = 5.830e-33 Identity = 82/171 (47.95%), Postives = 107/171 (62.57%), Query Frame = 3
Query: 408 AHGRAHGTLLEAQIELAAAGDKVAASA-DALAAVYGPDVAAGKDDLVVELSVRGRRMTTLLSTLQACPESFLATKFNEDRWPATDKDVDEHGRRLIDCSPSVFAKILDVLRMRKRAAWA--------GTALQPGCDELVCVIIKAGDRDSFEKFVEKRFPGDLQSFMMDCV 893
AH RA+ + + LA A KVA++A +AL VYGPD+ +GK D VVELSVRG RMTTL STL CP+S T FN + W T+KD+D+HG ++DC P+VFAK+LDVLRM+KRA WA G ++P V V ++ R E+FV K G + F+MD V
Sbjct: 173 AHDRAYLENVSHALGLARAKAKVASAALEALTNVYGPDIVSGKKDEVVELSVRGVRMTTLRSTLTVCPDSVFTTWFNGN-WKPTEKDLDKHGGGMLDCKPTVFAKVLDVLRMKKRAGWAPSEDAGGGGVVVKP-----VPVAVRPAGRACLEEFVNKYLSG-CERFIMDLV 336 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig178.97.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig178.97.1 >prot_P-littoralis_Contig178.97.1 ID=prot_P-littoralis_Contig178.97.1|Name=mRNA_P-littoralis_Contig178.97.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=174bp MLKDGNVSRPTPFQPAKWGIFSEKGSTAVYRGSCHGPCFGGGHDFHVNLTback to top mRNA from alignment at P-littoralis_Contig178:444273..445165+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig178.97.1 ID=mRNA_P-littoralis_Contig178.97.1|Name=mRNA_P-littoralis_Contig178.97.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=893bp|location=Sequence derived from alignment at P-littoralis_Contig178:444273..445165+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig178:444273..445165+ >mRNA_P-littoralis_Contig178.97.1 ID=mRNA_P-littoralis_Contig178.97.1|Name=mRNA_P-littoralis_Contig178.97.1|organism=Pylaiella littoralis U1_48|type=CDS|length=522bp|location=Sequence derived from alignment at P-littoralis_Contig178:444273..445165+ (Pylaiella littoralis U1_48)back to top |