mRNA_P-littoralis_Contig176.59.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig176.59.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 127 bits (319), Expect = 2.200e-31 Identity = 68/166 (40.96%), Postives = 99/166 (59.64%), Query Frame = 1
Query: 1 SKKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSW 423
++K R+T+VLAV DG+KV PRII++G PF+ T + G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH +E F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++
Sbjct: 345 NEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 510
BLAST of mRNA_P-littoralis_Contig176.59.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 125 bits (313), Expect = 2.220e-31 Identity = 66/164 (40.24%), Postives = 96/164 (58.54%), Query Frame = 1
Query: 7 KLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSW 423
K R+T+VLAV DG+KV PRII+KG PF+ +PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH++E + L A T+V+++ GGLTP+ QPLDR +NK+ KR +R +YT++
Sbjct: 152 KERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAY 315
BLAST of mRNA_P-littoralis_Contig176.59.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 124 bits (312), Expect = 5.620e-31 Identity = 68/164 (41.46%), Postives = 96/164 (58.54%), Query Frame = 1
Query: 7 KLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSW 423
K R+T+VLAV DG+KV PRII+KG PF T + G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+CH++E F L A T+V+ + G LTP+ QPLDR +NK+ KR +R +YT++
Sbjct: 152 KERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAY 315
BLAST of mRNA_P-littoralis_Contig176.59.1 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI) HSP 1 Score: 120 bits (300), Expect = 9.050e-31 Identity = 65/164 (39.63%), Postives = 91/164 (55.49%), Query Frame = 1
Query: 7 KLRYTVVLAVRGDGQKVRPRIIYKGNPFVG------------------------GTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSW 423
K R+T+ LAV GD +KV R I+KG P + + GYP GG+S GVQ+ SWCD + W+ + RP + S QRP +LVLDDF+CH+++ F +L A T+V+ + GGLTP+ QPLDR +NK KR +R YT++
Sbjct: 90 KERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEMLPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFKCHKDDTFIAELKRQANTIVIFIPGGLTPLLQPLDRMLNKRMKRLLRGMYTNY 253
BLAST of mRNA_P-littoralis_Contig176.59.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE) HSP 1 Score: 120 bits (301), Expect = 1.150e-30 Identity = 65/164 (39.63%), Postives = 95/164 (57.93%), Query Frame = 1
Query: 7 KLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSW 423
K R+T+VLAV DG+KV PRII+KG PF+ T + +PA G+S GVQ SW D + + W++ + RP + S QRP +LVLDDF+CH++E F L A T+++ + GG+T + QPLDR +NK+ KR +R +YT++
Sbjct: 13 KERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEIHPANRAKHAHPANGMSFGVQGKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIIIFIPGGMTLLLQPLDRLLNKQMKRLLRGKYTAY 176
BLAST of mRNA_P-littoralis_Contig176.59.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 121 bits (304), Expect = 5.430e-30 Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = 1
Query: 7 KLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSW 423
K R+T+VLAV DG+KV RII+ G PF+ T + G+PA G+S GVQ+ SW D + + W + + RP + S QRP +LVLDDF+CH++E F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R++YT++
Sbjct: 86 KERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAY 249
BLAST of mRNA_P-littoralis_Contig176.59.1 vs. uniprot
Match: A0A6H5JB72_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB72_9PHAE) HSP 1 Score: 119 bits (298), Expect = 8.650e-29 Identity = 63/162 (38.89%), Postives = 87/162 (53.70%), Query Frame = 1
Query: 13 RYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWI 426
R+T+ LAV DG KV +II+KG PF+ FGYP G+S GVQ+ +WCD + W+++ + S+LVLDDFRCHR E F + L T+V+++ GGLTP+ QPLDR +NKE KR +R RYT ++
Sbjct: 311 RFTLCLAVMADGGKVPLQIIFKGKPFIPPSTAGRGRNTQPRKGSIAAESLPANRTKFGYPVSGMSFGVQEKNWCDARECILWLSESW-------------SILVLDDFRCHRSESFIEDLRRRTNTIVILIPGGLTPLFQPLDRMLNKEMKRLMRGRYTQYM 459
BLAST of mRNA_P-littoralis_Contig176.59.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 119 bits (297), Expect = 1.680e-28 Identity = 67/162 (41.36%), Postives = 90/162 (55.56%), Query Frame = 1
Query: 13 RYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 420
R+T+ LAV DG+KV RII+KG PFV + G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R YT+
Sbjct: 274 RFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTA 434
BLAST of mRNA_P-littoralis_Contig176.59.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 118 bits (296), Expect = 2.240e-28 Identity = 68/164 (41.46%), Postives = 90/164 (54.88%), Query Frame = 1
Query: 7 KLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTS 420
K R+T+ LAV DG KV RII+KG PFV + G P GG+S GVQ+ SWCD + W+ + RP GS R QR +LVLDDF+CH+++ F L A T+V+ + GGLTP+ QPLDR +NK+ KR +R YT+
Sbjct: 265 KERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTA 427
BLAST of mRNA_P-littoralis_Contig176.59.1 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE) HSP 1 Score: 114 bits (284), Expect = 3.300e-28 Identity = 63/162 (38.89%), Postives = 91/162 (56.17%), Query Frame = 1
Query: 13 RYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSW 423
R+ +VLAV DG+KV PRI +KG PF T + G+PA G+S GVQ+ SW D + + W++ + RP + S QRP +LVLDDF+ H++E F L A T+V+ + GGLTP+ QPLD +NK+ KR +R +Y ++
Sbjct: 35 RFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAY 196 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig176.59.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig176.59.1 >prot_P-littoralis_Contig176.59.1 ID=prot_P-littoralis_Contig176.59.1|Name=mRNA_P-littoralis_Contig176.59.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=142bp SKKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNNFGYPAGGISLGVQKback to top mRNA from alignment at P-littoralis_Contig176:174188..174682- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig176.59.1 ID=mRNA_P-littoralis_Contig176.59.1|Name=mRNA_P-littoralis_Contig176.59.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=495bp|location=Sequence derived from alignment at P-littoralis_Contig176:174188..174682- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig176:174188..174682- >mRNA_P-littoralis_Contig176.59.1 ID=mRNA_P-littoralis_Contig176.59.1|Name=mRNA_P-littoralis_Contig176.59.1|organism=Pylaiella littoralis U1_48|type=CDS|length=426bp|location=Sequence derived from alignment at P-littoralis_Contig176:174188..174682- (Pylaiella littoralis U1_48)back to top |