prot_P-littoralis_Contig176.90.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig176.90.1
Unique Nameprot_P-littoralis_Contig176.90.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length53
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig176.90.1 vs. uniprot
Match: A0A6H5KW14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW14_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 6.210e-6
Identity = 28/42 (66.67%), Postives = 34/42 (80.95%), Query Frame = 0 
Query:   12 IQGHPDELDDDNLEGEDSQDEEEQDLDILAPVAATLNEYSEQ 53
            I G  ++LDDDN+ GEDS DE EQDL+IL+PVAA LNE+S Q
Sbjct:   50 ILGFSEDLDDDNMVGEDSDDEVEQDLEILSPVAAMLNEHSGQ 91
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig176.90.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KW14_9PHAE6.210e-666.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig176contigP-littoralis_Contig176:259398..259822 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig176.90.1mRNA_P-littoralis_Contig176.90.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig176 259397..259822 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig176.90.1 ID=prot_P-littoralis_Contig176.90.1|Name=mRNA_P-littoralis_Contig176.90.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=53bp
DRAHGGDSPTPIQGHPDELDDDNLEGEDSQDEEEQDLDILAPVAATLNEY
SEQ
back to top