prot_P-littoralis_Contig174.90.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig174.90.1
Unique Nameprot_P-littoralis_Contig174.90.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length102
Homology
BLAST of mRNA_P-littoralis_Contig174.90.1 vs. uniprot
Match: D7FYT5_ECTSI (40S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYT5_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 1.510e-60
Identity = 99/101 (98.02%), Postives = 100/101 (99.01%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGVAVSAVPARV 101
            MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAG+AVSAVP RV
Sbjct:   25 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGIAVSAVPPRV 125          
BLAST of mRNA_P-littoralis_Contig174.90.1 vs. uniprot
Match: F0Y4Q4_AURAN (Uncharacterized protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y4Q4_AURAN)

HSP 1 Score: 165 bits (418), Expect = 5.500e-51
Identity = 82/95 (86.32%), Postives = 92/95 (96.84%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGVAVS 95
            +DFHTNKRVCDEVA++PSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAI+Q+ ++IDPDTK++LDALDFKDL G+ VS
Sbjct:   25 VDFHTNKRVCDEVAVVPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIDQDFVEIDPDTKEMLDALDFKDLPGIQVS 119          
BLAST of mRNA_P-littoralis_Contig174.90.1 vs. uniprot
Match: A0A836CIS9_9STRA (40S ribosomal protein S17 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIS9_9STRA)

HSP 1 Score: 165 bits (417), Expect = 8.310e-51
Identity = 84/96 (87.50%), Postives = 92/96 (95.83%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGVAVSA 96
            +DFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERR+DFVPEVSAIEQE I+IDPDTK+LLDALDFKD+  +++ A
Sbjct:   25 LDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRLDFVPEVSAIEQERIEIDPDTKELLDALDFKDIPNLSIVA 120          
BLAST of mRNA_P-littoralis_Contig174.90.1 vs. uniprot
Match: A0A7S4SMK2_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4SMK2_9DINO)

HSP 1 Score: 164 bits (416), Expect = 1.430e-50
Identity = 84/96 (87.50%), Postives = 91/96 (94.79%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGVAVSA 96
            +DFHTNKRVCDEVAIIPSKRMRNKIAGF+THLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSA++QE I++DP TK +LDALDFKDL GV VSA
Sbjct:   35 LDFHTNKRVCDEVAIIPSKRMRNKIAGFITHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSALDQEVIEVDPQTKAMLDALDFKDLPGVQVSA 130          
BLAST of mRNA_P-littoralis_Contig174.90.1 vs. uniprot
Match: A0A1E7EU86_9STRA (Ribosomal protein S17 component of cytosolic 80S ribosome and 40S small subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU86_9STRA)

HSP 1 Score: 148 bits (373), Expect = 4.330e-44
Identity = 74/100 (74.00%), Postives = 90/100 (90.00%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGVAVSAVPAR 100
            +DFHTNKR+ DEVAI+PSKRMRNKIAG+ THLM+RI +GPVRGISLKLQEEERERR+DFVPEVSA+EQ++I IDPDT+D+L++L F  L GVAV++ P R
Sbjct:   25 LDFHTNKRIVDEVAILPSKRMRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQDTITIDPDTRDMLESLGFGSLNGVAVNSGPHR 124          
BLAST of mRNA_P-littoralis_Contig174.90.1 vs. uniprot
Match: Q8ISP1_BRABE (40S ribosomal protein S17 n=4 Tax=Branchiostoma TaxID=7737 RepID=Q8ISP1_BRABE)

HSP 1 Score: 145 bits (366), Expect = 6.640e-43
Identity = 69/95 (72.63%), Postives = 90/95 (94.74%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGVAVS 95
            +DFHTNKR+C+E+AIIPSK++RNK+AGFVTHLMKRIQRGPVRGIS+KLQEEERERR ++VPEVSAI+Q+ I++DPDTK++L ALDF +++G+ V+
Sbjct:   26 LDFHTNKRICEEIAIIPSKKLRNKVAGFVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSAIDQDIIEVDPDTKEMLKALDFGNISGLQVT 120          
BLAST of mRNA_P-littoralis_Contig174.90.1 vs. uniprot
Match: A0A7S0LDM9_9EUKA (Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S0LDM9_9EUKA)

HSP 1 Score: 145 bits (365), Expect = 6.730e-43
Identity = 75/95 (78.95%), Postives = 87/95 (91.58%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGVAVS 95
            +DFHTNKRV  EVAIIPSKRMRNKIAGF+THLMKRIQRGPVRGISLKLQEEERE R+DFVPE SAIEQ+ I ID DTKD+L++++FKD++GV V+
Sbjct:   25 LDFHTNKRVTAEVAIIPSKRMRNKIAGFITHLMKRIQRGPVRGISLKLQEEEREARLDFVPERSAIEQDVIVIDQDTKDMLESINFKDMSGVQVA 119          
BLAST of mRNA_P-littoralis_Contig174.90.1 vs. uniprot
Match: A0A7S2YDZ4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YDZ4_9STRA)

HSP 1 Score: 145 bits (365), Expect = 6.940e-43
Identity = 72/94 (76.60%), Postives = 87/94 (92.55%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGVAV 94
            +DFHTNKR+ D+VAI+PSKR+RNKIAG+ THLM+RI +GPVRGISLKLQEEERERR+DFVPEVSA+EQE+I IDPDT+D+L++L F  LAGVAV
Sbjct:   25 LDFHTNKRLIDDVAILPSKRIRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQETIQIDPDTRDMLESLGFNGLAGVAV 118          
BLAST of mRNA_P-littoralis_Contig174.90.1 vs. uniprot
Match: B7FVN4_PHATC (Predicted protein n=9 Tax=Bacillariophyta TaxID=2836 RepID=B7FVN4_PHATC)

HSP 1 Score: 145 bits (365), Expect = 7.150e-43
Identity = 73/100 (73.00%), Postives = 88/100 (88.00%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGVAVSAVPAR 100
            +DFHTNKR+ D+VAI+PSKRMRNKIAG+ THLM+RI +GPVRGISLKLQEEERERR+DFVPEVSA+EQE+I IDPDT+DLL++L +  L GVAV+    R
Sbjct:   25 VDFHTNKRIIDDVAILPSKRMRNKIAGYTTHLMRRIAKGPVRGISLKLQEEERERRLDFVPEVSALEQETIQIDPDTRDLLESLGYGKLNGVAVNQAHTR 124          
BLAST of mRNA_P-littoralis_Contig174.90.1 vs. uniprot
Match: A0A482RVV4_9ARCH (40S ribosomal protein S17 (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVV4_9ARCH)

HSP 1 Score: 144 bits (363), Expect = 1.280e-42
Identity = 75/100 (75.00%), Postives = 87/100 (87.00%), Query Frame = 0
Query:    1 MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQEEERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGVAVSAVPAR 100
            +DFHTNKR+  EVAIIPSKRMRNKIAGF+THLMKRIQ+GPVRGISLKLQEEERE RMDFVPE SAI+++ I +D DTK +LDAL+FKDL GV V+   A+
Sbjct:   21 LDFHTNKRITGEVAIIPSKRMRNKIAGFITHLMKRIQKGPVRGISLKLQEEEREARMDFVPERSAIDKDEILVDSDTKAMLDALNFKDLVGVRVADANAK 120          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.90.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYT5_ECTSI1.510e-6098.0240S ribosomal protein S17 n=2 Tax=Ectocarpus TaxID... [more]
F0Y4Q4_AURAN5.500e-5186.32Uncharacterized protein n=2 Tax=Pelagomonadales Ta... [more]
A0A836CIS9_9STRA8.310e-5187.5040S ribosomal protein S17 n=2 Tax=Tribonema minus ... [more]
A0A7S4SMK2_9DINO1.430e-5087.50Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A1E7EU86_9STRA4.330e-4474.00Ribosomal protein S17 component of cytosolic 80S r... [more]
Q8ISP1_BRABE6.640e-4372.6340S ribosomal protein S17 n=4 Tax=Branchiostoma Ta... [more]
A0A7S0LDM9_9EUKA6.730e-4378.95Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 ... [more]
A0A7S2YDZ4_9STRA6.940e-4376.60Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B7FVN4_PHATC7.150e-4373.00Predicted protein n=9 Tax=Bacillariophyta TaxID=28... [more]
A0A482RVV4_9ARCH1.280e-4275.0040S ribosomal protein S17 (Fragment) n=1 Tax=archa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001210Ribosomal protein S17ePFAMPF00833Ribosomal_S17ecoord: 2..94
e-value: 4.2E-46
score: 155.9
IPR001210Ribosomal protein S17ePANTHERPTHR1073240S RIBOSOMAL PROTEIN S17coord: 2..96
IPR036401Ribosomal protein S17e-like superfamilyGENE3D1.10.60.20coord: 1..37
e-value: 4.6E-20
score: 72.9
IPR036401Ribosomal protein S17e-like superfamilySUPERFAMILY116820Rps17e-likecoord: 2..37
IPR018273Ribosomal protein S17e, conserved sitePROSITEPS00712RIBOSOMAL_S17Ecoord: 16..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig174contigP-littoralis_Contig174:366559..372589 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig174.90.1mRNA_P-littoralis_Contig174.90.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig174 366000..372624 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig174.90.1 ID=prot_P-littoralis_Contig174.90.1|Name=mRNA_P-littoralis_Contig174.90.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=102bp
MDFHTNKRVCDEVAIIPSKRMRNKIAGFVTHLMKRIQRGPVRGISLKLQE
EERERRMDFVPEVSAIEQESIDIDPDTKDLLDALDFKDLAGVAVSAVPAR
V*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001210Ribosomal_S17e
IPR036401RPS17e-like_sf
IPR018273Ribosomal_S17e_CS