mRNA_P-littoralis_Contig174.64.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig174.64.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 254 bits (648), Expect = 5.440e-80 Identity = 130/154 (84.42%), Postives = 137/154 (88.96%), Query Frame = 1
Query: 106 TMNAV*HTEE*YFPCSPLVCFGPFMQWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILRMRFRILKLAMTYQKQYRLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQHTSGHNLDSSSVGTKDLNDKPQVEAAHAVLKRKLTT 567
T++ T E C +V G + +WRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGIL+MRFRILKLAMTYQKQ RLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQ+TSGHNLDSSSVGTKDLNDKPQVEAAHA LKRKLTT
Sbjct: 281 TVHKKDGTTETLKGCYLIVDNG-YHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGHNLDSSSVGTKDLNDKPQVEAAHAELKRKLTT 433
BLAST of mRNA_P-littoralis_Contig174.64.1 vs. uniprot
Match: A0A6H5JZL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZL5_9PHAE) HSP 1 Score: 176 bits (447), Expect = 2.320e-53 Identity = 90/130 (69.23%), Postives = 102/130 (78.46%), Query Frame = 1
Query: 184 WRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILRMRFRILKLAMTYQKQYRLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQHT--SGHNLDSSSVGTKDLNDKPQVEAAHAVLKRKLTT 567
W++LIEPSKYPLSE DLLF KRLESVRKDVECFFGIL+ RFRILKLAM YQ Q R+D VFFTCCILHNMLHT DGM L E+ NW+ SA + T + D SVGTKD+ND+PQ+E H V KR+LTT
Sbjct: 18 WQILIEPSKYPLSENDLLFLKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWISSAGVGATLATEPEADCGSVGTKDVNDQPQLEIGHTVRKRQLTT 147
BLAST of mRNA_P-littoralis_Contig174.64.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 180 bits (457), Expect = 3.230e-53 Identity = 97/142 (68.31%), Postives = 109/142 (76.76%), Query Frame = 1
Query: 148 CSPLVCFGPFMQWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILRMRFRILKLAMTYQKQYRLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQHTS--GHNLDSSSVGTKDLNDKPQVEAAHAVLKRKLTT 567
C LV G + +W++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGIL+ R RIL LAM +Q Q R+D VFFTCCILHNMLHT DGM L E+ NWV SA + TS DS SVGTKD+N +PQVEA HAV KR+LTT
Sbjct: 126 CYVLVDNG-YHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQVEAGHAVRKRQLTT 266
BLAST of mRNA_P-littoralis_Contig174.64.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 178 bits (451), Expect = 7.010e-52 Identity = 91/133 (68.42%), Postives = 104/133 (78.20%), Query Frame = 1
Query: 175 FMQWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILRMRFRILKLAMTYQKQYRLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQHT--SGHNLDSSSVGTKDLNDKPQVEAAHAVLKRKLTT 567
+ +W++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGIL+ RFRILKLAM YQ Q R+D VFFTCCILHNMLHT DGM L E+ NWV SA + T + D S GTKD+ND+PQ+E H V KR+LTT
Sbjct: 179 YHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVNDQPQLEIGHTVRKRQLTT 311
BLAST of mRNA_P-littoralis_Contig174.64.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 176 bits (445), Expect = 7.450e-50 Identity = 95/142 (66.90%), Postives = 108/142 (76.06%), Query Frame = 1
Query: 148 CSPLVCFGPFMQWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILRMRFRILKLAMTYQKQYRLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQHT--SGHNLDSSSVGTKDLNDKPQVEAAHAVLKRKLTT 567
C LV G + +W++LIEPSKYPLSE DLLFSKRLESVRKDVECFFGIL+ RFRILKLAM YQ Q R+D VFFTC ILHNMLHT DGM L E+ NWV SA + T + D SVGTKD+ND+PQ+E H V KR+LTT
Sbjct: 281 CYLLVDNG-YHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDVNDQPQLEIEHTVRKRQLTT 421
BLAST of mRNA_P-littoralis_Contig174.64.1 vs. uniprot
Match: A0A6H5JXJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXJ4_9PHAE) HSP 1 Score: 145 bits (367), Expect = 7.910e-42 Identity = 76/117 (64.96%), Postives = 84/117 (71.79%), Query Frame = 1
Query: 196 IEPSKYPLSEADLLFSKRLESVRKDVECFFGILRMRFRILKLAMTYQKQYRLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQH--TSGHNLDSSSVGTKDLNDKPQVEAAH 540
+EP+KYPLSE D+LFSKRLESVRKDVECFFGIL+ RFRILKL M Y +Q R+D VFFTCCILHNMLH DGM L E+ WV A + DSS VG KD NDK QVE H
Sbjct: 1 MEPTKYPLSENDILFSKRLESVRKDVECFFGILKGRFRILKLVMAYHEQERIDNVFFTCCILHNMLHIFDGMDQLVENTLWVSGAGAGTGVATEQEADSSFVGAKDTNDKEQVEKGH 117
BLAST of mRNA_P-littoralis_Contig174.64.1 vs. uniprot
Match: A0A6H5L0X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0X4_9PHAE) HSP 1 Score: 148 bits (373), Expect = 4.120e-39 Identity = 80/133 (60.15%), Postives = 96/133 (72.18%), Query Frame = 1
Query: 175 FMQWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILRMRFRILKLAMTYQKQYRLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQHTSGHNL--DSSSVGTKDLNDKPQVEAAHAVLKRKLTT 567
+ +W++LIEPSKYPLSE DLLFSKRL+SVR+D GIL+ RFRILKLAM YQ Q R+D VFFTCCI+HNMLHT DGM L E+ V SA + T L D SVG +D+ND+PQ+E V KR+LTT
Sbjct: 310 YHKWQILIEPSKYPLSENDLLFSKRLDSVRRDGSASDGILKGRFRILKLAMAYQSQERIDDVFFTCCIMHNMLHTFDGMDQLVENTIRVSSAGVGATLATELEADCGSVGRRDVNDQPQLEIGRTVRKRQLTT 442
BLAST of mRNA_P-littoralis_Contig174.64.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 146 bits (369), Expect = 4.630e-39 Identity = 78/126 (61.90%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 148 CSPLVCFGPFMQWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILRMRFRILKLAMTYQKQYRLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQH--TSGHNLDSSSVGTKDLNDK 519
C LV G + +W++L+EP+KYPLSE D+LFSKRLESVRKDVECFFGIL+ FRI K+AM Y +Q R+D VFFTCCILHNMLHT DGM L E+ WV SA + DSS+VG KD NDK
Sbjct: 266 CYLLVDNG-YHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAKDTNDK 390
BLAST of mRNA_P-littoralis_Contig174.64.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 138 bits (347), Expect = 2.800e-37 Identity = 72/121 (59.50%), Postives = 87/121 (71.90%), Query Frame = 1
Query: 148 CSPLVCFGPFMQWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILRMRFRILKLAMTYQKQYRLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQHTSGHN--LDSSSVGTK 504
C LV G + +W LI PSKYP+ + DL FSKRLESVRKDVECFFGI++ FRILKL++ Y KQ +D VFFTCCILHNMLH++D +EE+ NW G+A L + HN LD SSVG K
Sbjct: 83 CYLLVDNG-YHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAK 202
BLAST of mRNA_P-littoralis_Contig174.64.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 140 bits (354), Expect = 3.270e-36 Identity = 73/121 (60.33%), Postives = 88/121 (72.73%), Query Frame = 1
Query: 148 CSPLVCFGPFMQWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILRMRFRILKLAMTYQKQYRLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQHTSGHN--LDSSSVGTK 504
C LV G + +W LI PSKYP+ + DL FSKRLESVRKDVECFFGI++ RFRILKL++ Y KQ +D VFFTCCILHNMLH++D +EE+ NW G+A L + HN LD SSVG K
Sbjct: 324 CYLLVDNG-YHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAK 443 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.64.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig174.64.1 >prot_P-littoralis_Contig174.64.1 ID=prot_P-littoralis_Contig174.64.1|Name=mRNA_P-littoralis_Contig174.64.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=130bp MQWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILRMRFRILKLAMback to top mRNA from alignment at P-littoralis_Contig174:257798..258364- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig174.64.1 ID=mRNA_P-littoralis_Contig174.64.1|Name=mRNA_P-littoralis_Contig174.64.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=567bp|location=Sequence derived from alignment at P-littoralis_Contig174:257798..258364- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig174:257798..258364- >mRNA_P-littoralis_Contig174.64.1 ID=mRNA_P-littoralis_Contig174.64.1|Name=mRNA_P-littoralis_Contig174.64.1|organism=Pylaiella littoralis U1_48|type=CDS|length=390bp|location=Sequence derived from alignment at P-littoralis_Contig174:257798..258364- (Pylaiella littoralis U1_48)back to top |