prot_P-littoralis_Contig174.24.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig174.24.2
Unique Nameprot_P-littoralis_Contig174.24.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length223
Homology
BLAST of mRNA_P-littoralis_Contig174.24.2 vs. uniprot
Match: D7G118_ECTSI (Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G118_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 2.270e-122
Identity = 184/196 (93.88%), Postives = 185/196 (94.39%), Query Frame = 0
Query:   27 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKSASNVEEAFLTMASELIRTREARAATQVDNPTVQLGGSGSGASSNSKCC 222
            DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAK+ASNVEEAFLTMASELIRTREARAATQVDN TV LGG         KCC
Sbjct:    7 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVNLGGXXXXXXXXXKCC 202          
BLAST of mRNA_P-littoralis_Contig174.24.2 vs. uniprot
Match: A0A835Z965_9STRA (Rab1A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z965_9STRA)

HSP 1 Score: 326 bits (835), Expect = 3.440e-111
Identity = 172/200 (86.00%), Postives = 178/200 (89.00%), Query Frame = 0
Query:   27 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKSASNVEEAFLTMASELIRTREARAATQVDNP----TVQLGGSGSGASSNSKCC 222
            DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESF HVNDWLSEVNRYASEGTSKLLIGNKSDR DK V +  AK +A+SLGIPFLETSAKSASNVEEAFLTMASELIRTREARAA Q ++     TVQL    SG  S+ KCC
Sbjct:    7 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC 206          
BLAST of mRNA_P-littoralis_Contig174.24.2 vs. uniprot
Match: A0A7S3VAP6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAP6_9STRA)

HSP 1 Score: 303 bits (777), Expect = 2.670e-102
Identity = 161/206 (78.16%), Postives = 173/206 (83.98%), Query Frame = 0
Query:   20 SGTRVICDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDRE-DKVVDSAAAKEYAESLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAT--QVDNPTVQLGGSGSGASSNSKCC 222
            +G +   D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT Q+SFDHVNDWL EVNRYASEGT KLL+GNKSDR  DKVV +  AKE+A+ +GIPFLETSAKSA+NVEEAFLTMASELI+ R AR  T    D   VQLGG        S CC
Sbjct:    5 NGKKSDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQDSFDHVNDWLKEVNRYASEGTCKLLVGNKSDRTTDKVVTAEQAKEFADDIGIPFLETSAKSAANVEEAFLTMASELIKQRIARGGTAEDADGDNVQLGGGKRAKEMMSNCC 210          
BLAST of mRNA_P-littoralis_Contig174.24.2 vs. uniprot
Match: A0A7S1XNK2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNK2_9STRA)

HSP 1 Score: 297 bits (760), Expect = 5.940e-100
Identity = 154/197 (78.17%), Postives = 171/197 (86.80%), Query Frame = 0
Query:   27 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKVVDSAAAKEYAESLGIPFLETSAKSASNVEEAFLTMASELIRTREARAATQVDNPTVQLGGSGSGASSNSKCC 222
            DHLFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTV+IDKK VKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESF+ +  WL+EVNRYA+EGT KLL+GNKSDR ED++V +A  +E A+SLGIPFLETSAK+A+NVEEAFLTMASELI +RE R     D+  +QLG SG G   N KCC
Sbjct:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVRIDKKVVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNQESFNSITAWLNEVNRYATEGTCKLLVGNKSDRDEDRIVTTAQGEEMAKSLGIPFLETSAKNAANVEEAFLTMASELITSREERGGATGDDANLQLGSSGGG---NGKCC 194          
BLAST of mRNA_P-littoralis_Contig174.24.2 vs. uniprot
Match: F0YFR6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFR6_AURAN)

HSP 1 Score: 295 bits (756), Expect = 3.410e-99
Identity = 157/200 (78.50%), Postives = 170/200 (85.00%), Query Frame = 0
Query:   27 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKSASNVEEAFLTMASELIRTREARAATQVDNPTVQLGGSG----SGASSNSKCC 222
            DHLFKLVLIGD+GVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT  ESFDHV+DWL+EVNRYA+EGT KLL+GNK D EDKVV + AAKEYA+ LGIPFLETSAK+A+NVEEAFLTMA ELIR REA   +Q   P    G SG     G+S   KCC
Sbjct:    7 DHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVSDWLTEVNRYANEGTCKLLVGNKCDMEDKVVTTEAAKEYADGLGIPFLETSAKNATNVEEAFLTMAGELIRLREA---SQSAKPGAG-GASGLKLSGGSSRTKKCC 202          
BLAST of mRNA_P-littoralis_Contig174.24.2 vs. uniprot
Match: W7TI50_9STRA (Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TI50_9STRA)

HSP 1 Score: 294 bits (752), Expect = 1.760e-98
Identity = 153/194 (78.87%), Postives = 166/194 (85.57%), Query Frame = 0
Query:   27 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKSASNVEEAFLTMASELIRTREARAATQVDNPTVQLGGSGSGASSNSK 220
            D LFKLVLIGD+GVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT +ESF+H+ DWL+EVNRYASEGT KLL+GNKSDR DKVV +  AK++A+ LGIPFLETSAK+ASNVEEAFLTMA ELIR REA+ A          G SG   S +SK
Sbjct:    7 DFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDRPDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAAAPGPGGAASGKSGDTVSLSSK 200          
BLAST of mRNA_P-littoralis_Contig174.24.2 vs. uniprot
Match: A0A7S2N4U8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N4U8_9STRA)

HSP 1 Score: 293 bits (750), Expect = 3.430e-98
Identity = 154/197 (78.17%), Postives = 165/197 (83.76%), Query Frame = 0
Query:   27 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDRE-DKVVDSAAAKEYAESLGIPFLETSAKSASNVEEAFLTMASELIRTREARAATQVDNPTVQLGGSGSGASSNSKCC 222
            DHLFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT ++SFDHVNDW+ EVNRYASEGT KLL+GNKSDR  DK+V    AKE+A+ LGI FLETSAKSA NVEEAFLTMA ELI+ R  R +   D   V L G G  +   S CC
Sbjct:   15 DHLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSKDSFDHVNDWMKEVNRYASEGTCKLLVGNKSDRTADKIVKEEEAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIKQRAERGSNGDDKQKVSLNGEGR-SQVMSNCC 210          
BLAST of mRNA_P-littoralis_Contig174.24.2 vs. uniprot
Match: A0A7S1GR15_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GR15_CYCTE)

HSP 1 Score: 292 bits (747), Expect = 1.020e-97
Identity = 152/185 (82.16%), Postives = 160/185 (86.49%), Query Frame = 0
Query:   27 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKVVDSAAAKEYAESLGIPFLETSAKSASNVEEAFLTMASELIRTREARAATQVDNPTVQLGG 210
            D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT  ESFDHVNDWL EVNRYA+EGT KLL+GNKSDR  DKVV    AKE+A+ LGI FLETSAKSA NVEEAFLTMA ELIR R+AR  T      + L G
Sbjct:   16 DYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRVADKVVTEEKAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIRQRDARGITSDGKSGIDLSG 200          
BLAST of mRNA_P-littoralis_Contig174.24.2 vs. uniprot
Match: A0A7S4JIY9_9STRA (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S4JIY9_9STRA)

HSP 1 Score: 292 bits (748), Expect = 2.440e-97
Identity = 153/192 (79.69%), Postives = 165/192 (85.94%), Query Frame = 0
Query:    6 KTGKANIFPTRLSNSGTRVICDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKVVDSAAAKEYAESLGIPFLETSAKSASNVEEAFLTMASELIRTREAR 196
            K   AN  P   +++  +   D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGII+VYDVT  +SFDHVNDWL EVNRYASEGT KLLIGNKSDR  DKVV +  AKE+A+ LGI FLETSAKSA NVEEAFLTMA ELI+ REAR
Sbjct:   29 KETTANAMPPSSASAANKRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIILVYDVTSADSFDHVNDWLKEVNRYASEGTCKLLIGNKSDRTSDKVVAAEKAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIKQREAR 220          
BLAST of mRNA_P-littoralis_Contig174.24.2 vs. uniprot
Match: A0A7S2Y0T5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T5_9STRA)

HSP 1 Score: 290 bits (743), Expect = 2.830e-97
Identity = 147/196 (75.00%), Postives = 171/196 (87.24%), Query Frame = 0
Query:   27 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKSASNVEEAFLTMASELIRTREARAATQVDNPTVQLGGSGSGASSNSKCC 222
            D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D+KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYD+T +E+FDHVNDWL+EV+RYA E T KLL+GNKSDR D+ V++  AKEYA+ LGIPF+ETSAKSA+NVE+AFLTMA +LI  R+A+   +  N  V LGG  S ++S  +CC
Sbjct:    7 DYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKLDQKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDITHKEAFDHVNDWLAEVDRYAGESTCKLLVGNKSDRTDRAVETQTAKEYADELGIPFIETSAKSAANVEQAFLTMAKQLIELRQAKGVEE-SNQNVSLGGKSS-STSLPQCC 200          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig174.24.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G118_ECTSI2.270e-12293.88Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835Z965_9STRA3.440e-11186.00Rab1A, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A7S3VAP6_9STRA2.670e-10278.16Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1XNK2_9STRA5.940e-10078.17Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0YFR6_AURAN3.410e-9978.50Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
W7TI50_9STRA1.760e-9878.87Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A7S2N4U8_9STRA3.430e-9878.17Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1GR15_CYCTE1.020e-9782.16Hypothetical protein n=2 Tax=Cyclophora tenuis Tax... [more]
A0A7S4JIY9_9STRA2.440e-9779.69Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
A0A7S2Y0T5_9STRA2.830e-9775.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 53..69
score: 38.7
coord: 133..146
score: 40.09
coord: 30..51
score: 58.6
coord: 71..93
score: 56.57
coord: 167..189
score: 44.83
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 30..192
e-value: 3.5E-95
score: 332.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 27..192
e-value: 1.6E-31
score: 120.7
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 35..222
e-value: 3.3E-5
score: 24.8
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 13..193
e-value: 0.0076
score: -2.8
NoneNo IPR availablePANTHERPTHR47977LD21953P-RELATEDcoord: 26..222
NoneNo IPR availablePANTHERPTHR47977:SF6RAS-RELATED PROTEIN RABD2A-LIKEcoord: 26..222
NoneNo IPR availablePROSITEPS51419RABcoord: 25..222
score: 36.07196
NoneNo IPR availablePROSITEPS51420RHOcoord: 23..195
score: 9.64776
NoneNo IPR availableCDDcd01869Rab1_Ypt1coord: 28..191
e-value: 2.41739E-111
score: 314.267
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 32..193
e-value: 5.0E-14
score: 59.3
IPR001806Small GTPasePFAMPF00071Rascoord: 31..189
e-value: 3.9E-61
score: 205.4
IPR001806Small GTPasePROSITEPS51421RAScoord: 20..222
score: 19.254404
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 30..184
e-value: 1.9E-32
score: 110.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 25..222
e-value: 3.6E-69
score: 234.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 27..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig174contigP-littoralis_Contig174:110756..118823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig174.24.2mRNA_P-littoralis_Contig174.24.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig174 110592..118872 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig174.24.2 ID=prot_P-littoralis_Contig174.24.2|Name=mRNA_P-littoralis_Contig174.24.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=223bp
MYRMGKTGKANIFPTRLSNSGTRVICDHLFKLVLIGDSGVGKSCLLLRFA
DDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYR
GADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKV
VDSAAAKEYAESLGIPFLETSAKSASNVEEAFLTMASELIRTREARAATQ
VDNPTVQLGGSGSGASSNSKCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase