prot_P-littoralis_Contig173.63.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig173.63.1
Unique Nameprot_P-littoralis_Contig173.63.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length100
Homology
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BLAST of mRNA_P-littoralis_Contig173.63.1 vs. uniprot
Match: D8LFW2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW2_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 5.390e-31
Identity = 61/115 (53.04%), Postives = 70/115 (60.87%), Query Frame = 0 
Query:    1 MFWRNNATGECTRDLWFGPRGSEGNSQHRHLVPASFAPVFVEPAPPKPS----------DKKNKKITQPKVLATTWFC------QPWEEIFHPVTGKKHWRHRQTGDKRHTDPLF 99
            MFWRNN TGECTRDL+FGP GS    Q+R LVPASFAP FV+      S           KK+    Q    A  WF       QPWEEI+HPVTG+KHWRHR TG++R  DPL+
Sbjct:   91 MFWRNNHTGECTRDLFFGPWGSYPTVQYRELVPASFAPTFVDKNEENASATVDKGKGKGSKKDXXXXQGPPPAI-WFVSLLPELQPWEEIYHPVTGEKHWRHRATGEERQKDPLW 204
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig173.63.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFW2_ECTSI5.390e-3153.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig173contigP-littoralis_Contig173:238106..239350 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig173.63.1mRNA_P-littoralis_Contig173.63.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig173 237896..239769 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig173.63.1 ID=prot_P-littoralis_Contig173.63.1|Name=mRNA_P-littoralis_Contig173.63.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=100bp
MFWRNNATGECTRDLWFGPRGSEGNSQHRHLVPASFAPVFVEPAPPKPSD
KKNKKITQPKVLATTWFCQPWEEIFHPVTGKKHWRHRQTGDKRHTDPLF*
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