prot_P-littoralis_Contig173.55.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig173.55.1
Unique Name	prot_P-littoralis_Contig173.55.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	449

Homology

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BLAST of mRNA_P-littoralis_Contig173.55.1 vs. uniprot
Match: A0A6H5JT46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT46_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 8.390e-18
Identity = 91/261 (34.87%), Postives = 106/261 (40.61%), Query Frame = 0

Query:    1 MHAQPMMAA---GGSWMAYQDREGRPCWHNTATNEWTYNLAGSGGGGGML----------AMMGYGYPATSGVYGWPTTPAGVAA------PSQ--GSFSYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESPRTMPDPNGPDIGVMLGPGPASGVMPYA-SHDARGSIPLPFDLDSIMPAWFAGAA 239
            M A PMM A   GGSWMAY+DREGRPCWHNTATNEWTY+L+                   A+        +G+Y WPT PA  A       P Q  G + YG                                    XXXXXXXXXXXXXX                                                           DPNGP+ GV+LGPGP  G MPYA SH ARGS+P+PFD  +++P W  G+A
Sbjct:    1 MQAHPMMTAAVQGGSWMAYRDREGRPCWHNTATNEWTYDLSNGXXXXXXXXXXXXXXXXPAVATAAATVPAGMYAWPTAPAPAAVMVPTAVPQQLAGPYFYGADPGTVVMAPAIMMPAAGPYDAVAAHQQQQMLYMQQXXXXXXXXXXXXXXPGLMMAPAYQEQQEFPQPQYGVI------------------------------------DPNGPEAGVLLGPGPPDGFMPYAKSHKARGSVPVPFDPTTMLPGWMGGSA 225

[Close]

BLAST of mRNA_P-littoralis_Contig173.55.1 vs. uniprot
Match: D8LFW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW7_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 3.300e-11
Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query:  191 DPNGPDIGVMLGPGPASGVMPYA-SHDARGSIPLPFDLDSIMPAWFAGAA 239
            +PNGPD GV+LGPGP  GVMPY+ SH ARGS+PLPFD  +++PAW  G+A
Sbjct:   28 NPNGPDAGVLLGPGPPDGVMPYSKSHKARGSVPLPFDPTTMLPAWMGGSA 77

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig173.55.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig173.55.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JT46_9PHAE	8.390e-18	34.87	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LFW7_ECTSI	3.300e-11	66.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 359..420
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 316..340
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..315

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig173	contig	P-littoralis_Contig173:184379..187351 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig173.55.1	mRNA_P-littoralis_Contig173.55.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig173 184355..187351 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig173.55.1 ID=prot_P-littoralis_Contig173.55.1|Name=mRNA_P-littoralis_Contig173.55.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=449bp
MHAQPMMAAGGSWMAYQDREGRPCWHNTATNEWTYNLAGSGGGGGMLAMM
GYGYPATSGVYGWPTTPAGVAAPSQGSFSYGGGGGGAFMTPGGVMMVPAA
TSPYGTTAGAGAAAAFVDPVTGQQMMYVQQQQQQQQQQQLMQPMAQGMMM
MTPAAYQQLQQQQYAQHVFGAAGGGGGGGGGGGESPRTMPDPNGPDIGVM
LGPGPASGVMPYASHDARGSIPLPFDLDSIMPAWFAGAAAVGGAGAGGDG
ESGGVSGFFGRMMPGEAKKGKKSKNKKGEKGKDKGEGKGKDKGKGEGEDE
DKDESTDGNGKSNKNDDDDDDDDDDDDDDDDDDDDDGSEVEKEVLAASAA
AAAAAGVAAAANGPSYGAAASRSSSYGQYPAWDGFAKRGREPGGGSVGAN
GANGATGEKGGGGAGGGQGAWSHFYDRNGYKCWRNTVTGEKRSVDPYR*