prot_P-littoralis_Contig173.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig173.1.1
Unique Nameprot_P-littoralis_Contig173.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length103
Homology
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BLAST of mRNA_P-littoralis_Contig173.1.1 vs. uniprot
Match: A0A6H5JIS8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS8_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.270e-20
Identity = 52/89 (58.43%), Postives = 61/89 (68.54%), Query Frame = 0 
Query:   15 GNPCDAPLVESYLLCAAEEQKVGGVAVKQAEPMLAHALETLLASMRTRAQLSLSIQERISITRDTALVALAFYTMHRGFDLSFTLASQV 103
            GNPC +P V++YL    EEQK  GV  KQA P+L   L  LL  MR RA  S S+ ERI+ITRD AL +LA ++M RGFDLSFTL SQV
Sbjct:  798 GNPCASPTVDAYLTFTTEEQKRVGVTAKQAAPLLEDTLGELLPHMRLRALASDSMAERIAITRDVALFSLAHHSMRRGFDLSFTLGSQV 886
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig173.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JIS8_9PHAE1.270e-2058.43Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig173contigP-littoralis_Contig173:701..1009 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig173.1.1mRNA_P-littoralis_Contig173.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig173 701..1011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig173.1.1 ID=prot_P-littoralis_Contig173.1.1|Name=mRNA_P-littoralis_Contig173.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=103bp
RTTRSRRPVEPRDFGNPCDAPLVESYLLCAAEEQKVGGVAVKQAEPMLAH
ALETLLASMRTRAQLSLSIQERISITRDTALVALAFYTMHRGFDLSFTLA
SQV
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