prot_P-littoralis_Contig172.16.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig172.16.1
Unique Nameprot_P-littoralis_Contig172.16.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length156
Homology
BLAST of mRNA_P-littoralis_Contig172.16.1 vs. uniprot
Match: A0A6H5JBS7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS7_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 3.780e-12
Identity = 54/89 (60.67%), Postives = 61/89 (68.54%), Query Frame = 0
Query:   64 VGGICDCGQNAVFSQPASPSPASVPIRWVPVCGRCGKNGHMAMHCTAPRRFEGXXXXXXXXXXXXXXXXXSRGFGAGHPHDSVETTSGA 152
            VGGI DCG NAV+ QP S  P   P+  V  CGRCG+N H A+ C APRRFEG XXXXXXXXXXXXXX  S      HPH +V T++GA
Sbjct:  364 VGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCGRNDHHAIDCAAPRRFEGTXXXXXXXXXXXXXXAKSNR----HPHLNVVTSAGA 448          
BLAST of mRNA_P-littoralis_Contig172.16.1 vs. uniprot
Match: A0A6H5KYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB5_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 2.520e-11
Identity = 54/89 (60.67%), Postives = 62/89 (69.66%), Query Frame = 0
Query:   64 VGGICDCGQNAVFSQPASPSPASVPIRWVPVCGRCGKNGHMAMHCTAPRRFEGXXXXXXXXXXXXXXXXXSRGFGAGHPHDSVETTSGA 152
            VGGI DCG NAV+ QP S  P   P+  V  CGRC ++GH A+ C APRRFEG XXXXXXXXXXXXXXX S      HPH +V T++GA
Sbjct:  478 VGGIYDCGSNAVYHQPESLPPPGAPMGTVHRCGRCERHGHHAIDCAAPRRFEGTXXXXXXXXXXXXXXXKSNR----HPHLNVVTSAGA 562          
BLAST of mRNA_P-littoralis_Contig172.16.1 vs. uniprot
Match: A0A6H5JV09_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV09_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.590e-10
Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   64 VGGICDCGQNAVFSQPASPSPASVPIRWVPVCGRCGKNGHMAMHCTAPRRFEG 116
            VGGI DCG NAV+ QP S  P   P+  V  C RCG++GH A+ C APRRFEG
Sbjct:  234 VGGIYDCGSNAVYHQPESLPPPGAPMSTVHRCCRCGRHGHHAIDCAAPRRFEG 286          
BLAST of mRNA_P-littoralis_Contig172.16.1 vs. uniprot
Match: A0A6H5JU47_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU47_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 2.680e-8
Identity = 52/89 (58.43%), Postives = 58/89 (65.17%), Query Frame = 0
Query:   64 VGGICDCGQNAVFSQPASPSPASVPIRWVPVCGRCGKNGHMAMHCTAPRRFEGXXXXXXXXXXXXXXXXXSRGFGAGHPHDSVETTSGA 152
            VGGI DCG NAV+ QP S  P   P+  V  CGR     H A+ C APRRFEG XXXXXXXXXXXXXXX S      HPH +V T++GA
Sbjct:  364 VGGIYDCGSNAVYHQPKSLPPPGAPMGIVHRCGRXXXXXHHAIGCAAPRRFEGTXXXXXXXXXXXXXXXKSNR----HPHLNVVTSAGA 448          
BLAST of mRNA_P-littoralis_Contig172.16.1 vs. uniprot
Match: A0A6H5JN41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN41_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.030e-7
Identity = 51/89 (57.30%), Postives = 57/89 (64.04%), Query Frame = 0
Query:   64 VGGICDCGQNAVFSQPASPSPASVPIRWVPVCGRCGKNGHMAMHCTAPRRFEGXXXXXXXXXXXXXXXXXSRGFGAGHPHDSVETTSGA 152
            VGG+ DCG NAV  QP S  P   P+  V  CGR     H A+ C APRRFEG XXXXXXXXXXXXXXX S      HPH +V T++GA
Sbjct:  436 VGGVYDCGSNAVSHQPESLPPPGTPMGTVHRCGRXXXXXHHAIDCAAPRRFEGTXXXXXXXXXXXXXXXKSNR----HPHLNVVTSAGA 520          
BLAST of mRNA_P-littoralis_Contig172.16.1 vs. uniprot
Match: A0A6H5JBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBM3_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 4.590e-7
Identity = 38/101 (37.62%), Postives = 46/101 (45.54%), Query Frame = 0
Query:   52 QRPSSSGEFQLEVGGICDCGQNAVFSQPASPSPASVPIRWVPVCGRCGKNGHMAMHCTAPRRFEGXXXXXXXXXXXXXXXXXSRGFGAGHPHDSVETTSGA 152
            Q+P+  G     VGGI DCG NAV+ QP SP P   P+  V  C         A+ C APRRFEG                 S      HPH +V T++GA
Sbjct:  115 QQPAMDG-----VGGIYDCGCNAVYHQPESPPPPGAPMGTVHRCXXXXXXXXXAIDCAAPRRFEGTSGACDQYGHMWRNCAKSNR----HPHLNVVTSAGA 206          
BLAST of mRNA_P-littoralis_Contig172.16.1 vs. uniprot
Match: A0A6H5JVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD9_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.230e-6
Identity = 50/89 (56.18%), Postives = 57/89 (64.04%), Query Frame = 0
Query:   64 VGGICDCGQNAVFSQPASPSPASVPIRWVPVCGRCGKNGHMAMHCTAPRRFEGXXXXXXXXXXXXXXXXXSRGFGAGHPHDSVETTSGA 152
            VGGI DCG +AV+ QP S  P   P+  V  CGR       A+ C APRRFEG XXXXXXXXXXXXXXX S      HPH +V T++GA
Sbjct:  436 VGGIYDCGSDAVYHQPESLPPPDAPMGTVHRCGRXXXXXXHAIDCAAPRRFEGTXXXXXXXXXXXXXXXKSNR----HPHLNVVTSAGA 520          
BLAST of mRNA_P-littoralis_Contig172.16.1 vs. uniprot
Match: A0A6H5JXN1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN1_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 2.140e-6
Identity = 50/89 (56.18%), Postives = 56/89 (62.92%), Query Frame = 0
Query:   64 VGGICDCGQNAVFSQPASPSPASVPIRWVPVCGRCGKNGHMAMHCTAPRRFEGXXXXXXXXXXXXXXXXXSRGFGAGHPHDSVETTSGA 152
            VGG  DCG NAV+ QP S  P   P+  V  CGR       A+ C APRRFEG XXXXXXXXXXXXXXX S      HPH +V T++GA
Sbjct:  219 VGGNYDCGSNAVYHQPESLPPPGAPMGTVHRCGRXXXXXXHAIDCAAPRRFEGTXXXXXXXXXXXXXXXKSNR----HPHLNVVTSAGA 303          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig172.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JBS7_9PHAE3.780e-1260.67CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KYB5_9PHAE2.520e-1160.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV09_9PHAE1.590e-1058.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JU47_9PHAE2.680e-858.43CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JN41_9PHAE1.030e-757.30Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBM3_9PHAE4.590e-737.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVD9_9PHAE1.230e-656.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXN1_9PHAE2.140e-656.18Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 94..110
e-value: 0.091
score: 17.6
coord: 117..133
e-value: 0.26
score: 14.8
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 118..131
score: 8.597819
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 95..108
score: 9.042855
NoneNo IPR availableGENE3D4.10.60.10coord: 91..134
e-value: 2.8E-9
score: 38.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 93..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig172contigP-littoralis_Contig172:89500..89967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig172.16.1mRNA_P-littoralis_Contig172.16.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig172 89500..89968 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig172.16.1 ID=prot_P-littoralis_Contig172.16.1|Name=mRNA_P-littoralis_Contig172.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=156bp
QQRRGGRAGRHRESDRVTAGNSRGQRQRQQWSNRGGPPQQPQQQQQQHCV
FQRPSSSGEFQLEVGGICDCGQNAVFSQPASPSPASVPIRWVPVCGRCGK
NGHMAMHCTAPRRFEGNCATCGEYGHVSRLCITSRGFGAGHPHDSVETTS
GASNNA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf