prot_P-littoralis_Contig171.88.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig171.88.2
Unique Nameprot_P-littoralis_Contig171.88.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length840
Homology
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: D7G1X1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X1_ECTSI)

HSP 1 Score: 754 bits (1947), Expect = 6.130e-261
Identity = 571/844 (67.65%), Postives = 600/844 (71.09%), Query Frame = 0
Query:    1 MSRKRSRKEGAGMQRWDALPWKAIEPPLERDDGWRGMGGEEQALLYTLEEISGSDYCVREDTLGGSQSCTAVIHTLAFLAAAAAAVTLPAGPSSQMMAVKTAPAAGVDVPAAVDGGSDHGSGKTKEKKKVKGTKRKTAPEQXXXXXXXXXXXXXXXXXXXXXXXXXXEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDSTPGSEAGADGSARSSAVVVAAGEQQHAGEQTAEAAXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---RNRERDWELGAEETAKMMPWRYLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVTAEIGGGEEDAGPAEGSE-----AAGPPALPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAAVQGRGVGKGLGKKGNQHAARLAAEARQALAASLSRPLHSDRRKLIPVAQALTDMKAVSVRTAAGDLAGKQRTRSGKQ 836
            MSRKR RK   G QRWDALPWK IEPPLERDDGW+GM GEEQALLYTLEEISG+DYC+RED+LGGSQ  + +   L  +      V  P  PS++ M     P A  D    V GG  +G               + AP                    XXXXXXXX  XXXXXXXXXXXXXX                XX            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                       XXXXXX XXXXXXXXXXXXXXXXXXXX                 +  ERDWELG+EE AKM PW YLGV +HPALLWHLHRQGFHDPTPIQRRVLPKA+LGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAA                        ++  G + D  +        EGL +GLQALVLCPTRELALQVAAHLREVVRDTG++VV  A        AGPA         AA  PALPSTLKLCSIKSLQMEKDVHAYLFCA YPGRTLIFVNAIAIARRLS LLC+L VPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLH GMQAFPLD+RMVERARERVGMA+RVLKFQEAQNRVSASNDFFRG+SKEADLVMD DL M+DAGA+ DAA QGR   KGLGKKGNQHAARLAA ARQALA SLSRPLHSDRRKLIPVAQALTDM+AVS RTAAGDLAGKQRTRSGKQ
Sbjct:    1 MSRKRGRKGAGGGQRWDALPWKTIEPPLERDDGWQGMAGEEQALLYTLEEISGNDYCLREDSLGGSQERSFLAIILCQM------VVAPTTPSAEDM-----PPAAQDSAGGVGGGVGNGKEXXXXXXXXXXXXXRKAPSALAAASEGGSSSKTEGGTAXXXXXXXXXXXXXXXXXXXXXXXXNAAVEGGGAEKTTEDGXXDGEPEASNKGPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNARGEDKGGEEAAEVGQKKSERDWELGSEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAAAA--------------------RLAEGEEAD--QXXXXXXXXEGLHEGLQALVLCPTRELALQVAAHLREVVRDTGVAVVEAAA-------AGPAXXXXXXXXXAAELPALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALSVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVGMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRRGVKGLGKKGNQHAARLAAGARQALAVSLSRPLHSDRRKLIPVAQALTDMRAVSERTAAGDLAGKQRTRSGKQ 804          
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A6H5KFI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI4_9PHAE)

HSP 1 Score: 654 bits (1686), Expect = 2.750e-219
Identity = 424/736 (57.61%), Postives = 445/736 (60.46%), Query Frame = 0
Query:  342 RNRERDWELGAEETAKMMPWRYLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVT----AEI--------------------------------------------------------------------------GGG---------------------------EEDAG-----------------------------------PAE---------------------------------------------------------------------------------GSE------AAGP--------------PALPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAAVQGRGVGKGLGKKGNQHAARLAAEARQALAASLSRPLHSDRRKLIPVAQALTDMKAVSVRTAAGDLAGKQRTRSGKQ 836
            +  ERDWELGAEE AKM PW YLGV +HPALLWHLHRQGFHDPTPIQRRVLPKA+LGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAA XXXXXXXXX                + G + D  E   EE + EGL +GLQALVLCPTRELALQVAAHLREVVRDTG++VV      AE+                                                                          GG                            EED+G                                   PAE                                                                                 G+E      AAGP              PALPSTLKLCSIKSLQMEKDVHAYLFCA YPGRTLIFVNAIAIARRLS LLC+L+VPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLH GMQAFPLD+RMVERARERVGMA+RVLKFQEAQNRVSASNDFFRG+SKEADLVMD DL M+DAGA+ DAA QGR   KGLGKKGNQHAARLAAEARQALA SLS+PLHSDRRKLIPVAQALTDM+AVS RTAAGDLAGKQRT SGKQ
Sbjct:  251 KKSERDWELGAEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAXXXXXXXXX---------------SDEGGEADQRE--GEEKEREGLHEGLQALVLCPTRELALQVAAHLREVVRDTGVAVVAVVGGLAEVKQQRQLSRRPEVVVATPGRFWEMAGTHAHLSRLETLRHLVVDEADRMLERGHYPELSRLFSMLAKAEGRREGGDGGSSSKSRFEEKFPFDVSEGGEWSVPQEEEEEDSGEGGKMFDDAMDEXXXXXXXXXXXXXXXXASRVRSPPAETNRHDGRGFARQTYVFSATLTLGSSGRQQRKKGGAXXXXXKGKGKRGEGDDDAVKNIMDRVGVRGDPAVIDMGRRTVGGGGGAETGQDAAAAGPAVVDGGAGAGAADLPALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVGMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRRGVKGLGKKGNQHAARLAAEARQALAVSLSQPLHSDRRKLIPVAQALTDMRAVSERTAAGDLAGKQRTSSGKQ 969          
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: W7TKC3_9STRA (Atp-dependent rna helicase ddx24 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKC3_9STRA)

HSP 1 Score: 203 bits (517), Expect = 3.730e-53
Identity = 127/290 (43.79%), Postives = 169/290 (58.28%), Query Frame = 0
Query:  538 ALPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVL-----------------GLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAAVQGRGVGKGLGKKGNQHAARLAAEARQALAASLSRPLHSDRRKLIPVAQAL 810
            ALP+ LKLC +KS+   KD + Y F   +PGRT++F N+I   RRL+ LL  L +PA  LHA+MQQR RLKSLD F +  +AVLVATDVAARGLDIP VEHV+HYD  RS EVF+HRAGRTARA   GLS S+VAPRD+  H + C  L                 G   GM  FP+D++ +   RERV +A +++  ++   R  A+  +F   ++EADL +DE+L  +                K  G +  +  +R     R+ L   LS+P+   RRK I VA +L
Sbjct:  223 ALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNE----------------KEHGTEKERQRSRQMEMDRKRLNELLSQPMVQQRRKFINVADSL 496          
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A836CDB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDB6_9STRA)

HSP 1 Score: 211 bits (537), Expect = 4.260e-53
Identity = 133/323 (41.18%), Postives = 182/323 (56.35%), Query Frame = 0
Query:  531 SEAAGPPALPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVR---------------------------VLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAAVQGRGVGKGLGKKGNQHAARLAAEARQALAASLSRPLHSDRRKLIPVAQALTDMKAVSVRTAAGDLA 826
            S AA  PALP  L L   KSLQ +KD   YLF   +PGRTL+FVNA+ +ARR++ +L  L +P  PLHAQM QR RL++LD   +  +  ++ATDVAARGLD+P V+HVVHYDA RSA  F+HR+GRTARA   G +LSI+APRD+A   +  + +G   G+ A P D R++++ARER  +A R                           V + + AQ +  A+      ++ +AD+V+DE        A ADA        +G G +G  H               L+ PL SDRRK +PVA+ L +  A + RTAAG++A
Sbjct:  776 SGAAPLPALPEGLTLAQTKSLQADKDAWLYLFATQFPGRTLVFVNAVVMARRVAQVLQLLRIPCAPLHAQMAQRARLRALDFLRTSERCCVIATDVAARGLDVPHVDHVVHYDAPRSAADFVHRSGRTARAGRGGFALSIIAPRDEAAFARVFAAVGYPAGLPALPCDPRLLDKARERALLAARXXXXXXXXXXXXXXXXXXXXXRCLGEAVTRCEAAQGKAGAARTLLSSLAGDADMVVDEAAL-----AIADA--------EGGGARGGAHXXXXXXXXXXXXXXXLAEPLFSDRRKFLPVAEKLAEAAAEARRTAAGEVA 1085          
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A2J7RKC7_9NEOP (RNA helicase n=4 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RKC7_9NEOP)

HSP 1 Score: 206 bits (524), Expect = 1.060e-52
Identity = 168/520 (32.31%), Postives = 230/520 (44.23%), Query Frame = 0
Query:  356 AKMMPWRYLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVA----------EEGKSEGL-QDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVTAEIGG---GEEDAGPAEGSE--AAGPPAL--------PSTLKLCSIKSLQM-------------------------------------------------------------------------------------------------------EKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEAD-LVMDEDL 747
            +KM  W   GVGI   +L  L  QGF +PT IQ + LP A+LGR+DI+GAAETGSGKTLAFG+P+L  IL   D                          + E   D +  E+V               + G  Q  L ALVL PTRELA+QV  HL    R TGI + V   +GG    +++   + G E   A P  L        P   ++ +I+ L +                                                                                                       EKDV+ Y F   +PGRTLIF N+I+  RRL+ LL  L     PLHA M QRQRLK+LDRF  + + +L+ATDVAARGLDIP V+HV+HY   R++E ++HR+GRTARA+  GL+L ++ P +  ++ + C  LG    +  FP+   ++  A++RV +A  + + + A  + S    +FR    E D LV DEDL
Sbjct:  132 SKMSAWH--GVGIMSPILRALEEQGFVEPTEIQAKTLPAAVLGRRDILGAAETGSGKTLAFGIPILHRIL--EDRGQSAGRYNLVHAKRTIEAEPCQSENEYEEHEDENSREMVGLGCVQVMKDVSPHNTPGCSQSKLYALVLTPTRELAMQVHKHLTAAARYTGIKIAVV--VGGMAPQKQERLLSRGPEIVVATPGRLWELIQDGNPHLAQVSNIRCLAIDETDRMLERGHFQELHNLLELLNVDEGKKRQRQNFVFSATLTMVHEPPRRLKSRNKKLRLTPGQKLQNIMTMLGVTNPKVVDVTKESGTAGTLTEARIVCALEEKDVYLYYFIQQHPGRTLIFCNSISCVRRLAQLLSLLQCRPLPLHANMMQRQRLKNLDRFRDNSRGLLLATDVAARGLDIPGVQHVIHYQVPRTSETYVHRSGRTARAQKEGLTLLLIEPTEVPHYTRLCRTLGRTKDLPLFPISSSLLAAAKQRVTLAQELDRLELATRKSSTETGWFRKALTEMDMLVDDEDL 645          
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A059LKR6_9CHLO (DEAD/DEAH box helicase (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LKR6_9CHLO)

HSP 1 Score: 204 bits (520), Expect = 5.430e-52
Identity = 152/452 (33.63%), Postives = 217/452 (48.01%), Query Frame = 0
Query:  358 MMPWRYLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVTAEIGG-------------GEEDAGPA----EGSEAAGPPA----------------------------------------------LPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDED 746
            M  WR    G+   +L  L   GF +PTPIQ  V+  A+   +D++GAA+TGSGKTLAFGLP++  +L  R                           ++E+  +G         G +   +  L+AL++ PTRELALQV  HL  V R  G+ VV    +GG              E   G      E  +A+GP A                                              + S +   S++  +  +DV  Y     +PGRTL+FVNAIA ARRL+ +L  L +P   LHA+ QQRQRLK+LDRF    +AVLVATDVAARGLDIP V  VVHY    + + ++HR+GRTARA   GL++++V P++ A ++     L   +    FPLD  +   A+ RV +A+RV   +    +  A   + R  +++ DL++ ED
Sbjct:  172 MDSWRI--YGLSEPVLSALGALGFEEPTPIQAAVVEAAVRDGRDVLGAAQTGSGKTLAFGLPIIERLLRER---------------------------RLEAREEG---------GAAPARRRCLKALIVAPTRELALQVQQHLERVARPCGLRVVPV--VGGLAIQKQERQLVKRPEIVVGTPGRLWEVMQASGPAASHLCSLGGLRALVIDEADSMVMPGRFVELKSIVDRPLVVDLTPERQVASGVAEASLQCTEESRDVQLYCLLQQHPGRTLVFVNAIAAARRLTAILKILGLPVQALHAEQQQRQRLKALDRFRDSEQAVLVATDVAARGLDIPGVACVVHYQLPATLDSYVHRSGRTARAEKEGLAVAMVMPKEAARYQALLRALNKAEAPPPFPLDPGVYLEAKRRVSLALRVDALERGAAKQHADRAWRRTQARDMDLLLSED 583          
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: N6TJQ3_DENPD (RNA helicase (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6TJQ3_DENPD)

HSP 1 Score: 201 bits (511), Expect = 1.830e-51
Identity = 157/493 (31.85%), Postives = 224/493 (45.44%), Query Frame = 0
Query:  372 LLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDG-GEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISV-VVTAEIGGGEEDAGPAEGSE-AAGPPA----------------------------------------------------------------------LPS-----------------------------------------------TLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMD 744
            LL  L  QGF  PT IQ   LP A+LGR+DI+GAAETGSGKTLAFGLP+LS I+  R+A                           + G D  G G V A + KS  ++  L AL+L PTRELA+QV  HL +V + TGI++ VV   +   +++    +G E   G P                                                                       +P                                                TL  C I     EKD + + F   +PGRTLIF N+I   +RL+ LL  L+    PLHA MQQRQRLK+L++FT    ++L+ATDVAARGLDIP+++HV+HY   R++E ++HR+GRTARA   GL++ ++ P +  N+ + C  LG  D +  FP+  + +   +ERV +A ++ K Q    + +A   + +  ++E D+V+D
Sbjct:   90 LLRALQEQGFSYPTEIQAHTLPAALLGRRDILGAAETGSGKTLAFGLPILSGIMRLREAGIADEAADSEYSESEDE----------DIGVDEHGMGCVNAYKLKSAEVRRPLYALILTPTRELAMQVKNHLTKVAKYTGINIAVVVGGMAAVKQERLLRKGPEIVVGTPGRLWELIQQGNEHLSQIDNIKFLAIDETDRMLEKGHFMELHDLLEKMNLDQQKKSERQNFVFSATLTLIHDIPKHLVLKRKIKGRKLHDMTAEQKVQKIVNTLGITNPKIVDLSQGKGTSGTLSECRITCDIEEKDYYVFYFLKKHPGRTLIFCNSIGCVKRLTNLLGLLNCSPLPLHASMQQRQRLKNLEKFTETENSILIATDVAARGLDIPEIDHVLHYQTPRTSESYVHRSGRTARASVQGLTILLMEPSEFTNYMKMCKTLG-KDNLPPFPVQDKYLSAVKERVNLARQLDKLQLQVRKFNAEEGWLQKAAREMDIVVD 571          
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A1W4XTB4_AGRPL (RNA helicase n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4XTB4_AGRPL)

HSP 1 Score: 202 bits (513), Expect = 2.290e-51
Identity = 160/526 (30.42%), Postives = 222/526 (42.21%), Query Frame = 0
Query:  353 EETAKMMPWRYLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVTAEIGGGEED--------------AGPAEGSEAA--GPPALPS-------------------------------------------------------------------------------------------------------TLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAA 759
            EE   M  W   G  +  +L+  L  Q F  PT IQ   LP AILG+KDI+GAAETGSGKTLAFGLP+LS IL R++                                            KS    + L AL+L PTRELA+QV  HL    + T I + V   +GG   +              A P    E    G   L S                                                                                                       TL  C I     EKD + Y F   YPGRTLIF N+I   +RL+ LL  L +   PLHA MQQRQRLK+LDRF  DP+++L+ATDVAARGLDIP V+HV+HY   R++E ++HR+GRTARA   G+++ ++ P +  ++ + C  LG  + M  FP+   ++   ++RV +A  V K +    + S+   + +  + + D+++D+DL  ++     D+A
Sbjct:   96 EEVKNMEAWHKFG--LQESLIKALADQNFLYPTHIQALTLPSAILGKKDILGAAETGSGKTLAFGLPILSGILKRKELLDH----------------------------------------KSSDEFNPLNALILTPTRELAIQVKNHLTAAAKYTDIKIAVV--VGGMSAEKQERLLSKNPEIVVATPGRLWELIQLGNSHLSSIDKIRFLAIDETDRMLERGHFQELHDILEKINLMQNEQKNRQNFVFSATLTLEHELPKHLLLKRGRKINKSSSEYKLKKIIELIGMTNPKVVDITDRTGKTVQTLTECRISCSIDEKDYYIYYFLKKYPGRTLIFCNSIGCVKRLNSLLSVLQINVLPLHASMQQRQRLKNLDRFRDDPQSILIATDVAARGLDIPSVDHVLHYQMPRTSESYVHRSGRTARASKDGITVLLIDPSELQSYLRLCRTLGKGEDMPLFPVQQNILAAVKQRVNLAREVEKLELQNRKKSSEKGWLQKAADDMDIILDDDLVKEEEDNFLDSA 577          
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A8J9UEV1_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UEV1_BRAAE)

HSP 1 Score: 202 bits (513), Expect = 2.880e-51
Identity = 172/605 (28.43%), Postives = 258/605 (42.64%), Query Frame = 0
Query:  363 YLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVTAEIGG-----------------------------------------------------------------------------------------------------------------------------GEEDAGPAEGSEAAGPPALPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAAVQGRGVGKGLGKKGNQHAARLAAEARQALAASLSRPLH----------SDRRKLIPVAQALTDMKAVSVRTAAGDLAGKQRTR 832
            +L   +  ++L  L    F +PT IQ   LP AILGRK+I+GAAETGSGKTLAFGLP+L+ IL  ++                          ++E   +   G V A + K +  Q  L AL+L PTRELA+Q+ +HL +V + TGI++ V   +GG                                                                                                                             G +D    + ++  G     STL  C I     +KD + Y F   +PGRTLIF N+I   +RL+ LL  LD    PLHA MQQRQRLK+L+RFT D   +L+ATDVAARGLDIP VEHV+HY   R++E ++HR+GRTARA   G+++ ++ P +  N+ + C  LG  + +  FP+    +   ++RV +A  + K Q    + ++   +    ++E D+++D+                   + K    K  Q + +LA   R+ LA+ LS+P+           +    ++P+     + KAV V  AA +   KQ++R
Sbjct:  103 WLNFDLPESILKALAELKFKEPTQIQSLTLPSAILGRKNILGAAETGSGKTLAFGLPILTGILKIKEK-----------DGDNIEENSDDSEEELEDLDENGHGCVNAYKIKEKHPQKPLYALILTPTRELAMQIKSHLTKVAKYTGINIAVV--VGGMAAVKQERLLGKFPEIVVATPGRLWELIQQGNQHLSQVDKIRFLAIDETDRMLERGHFQELHSLIEKINVDEEILKKRQSFVFSATLTLIHDIPRHLINKQKIKGRRNLKDMTPEQKLLKIVNSLGIKDPKIVDITQGTG---TSSTLTECRITCKITDKDFYVYYFLQKHPGRTLIFCNSIGCVKRLNTLLTLLDCHPLPLHASMQQRQRLKNLERFTEDELGILIATDVAARGLDIPSVEHVLHYQTPRTSESYVHRSGRTARASKEGITVLLIEPTELPNYLKLCRTLGKDEDLPIFPVQENYLNAVKQRVNLARELDKLQLQVKKATSETGWLEKAAEEMDIIVDD-------------------MAKRYDTKEAQKSKKLAEIKRKHLASMLSKPVFPKGFSGKYPLATGELVLPMEVTDQNEKAVDVMKAAVETYSKQKSR 672          
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A087ULH5_STEMI (RNA helicase (Fragment) n=6 Tax=Stegodyphus TaxID=175340 RepID=A0A087ULH5_STEMI)

HSP 1 Score: 199 bits (506), Expect = 6.660e-51
Identity = 155/520 (29.81%), Postives = 226/520 (43.46%), Query Frame = 0
Query:  368 IHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVTAEIGG----------------------------------------------GEEDAGPAEGSEA---------------------------------------------------------------------AGPPALPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAAVQGRGVGKGLGKK 772
            +  ++L  L   GF+ PT IQ RV+P AI   +DI+GAAETGSGKTLAFG+PV+S IL+ ++ A                                          +++     L  LVL PTRELA+Q+  HL+ + + T I V V   IGG                                               E D    +G  A                                                                         A+  TL    I     EKD++ Y F   YPGRTLIF N+I   RRL  +L  LD    PLH+ M QRQRLK+L+RF +   AVL+ATDVAARGLDI  +EHV+H+   R+AE ++HR+GRTARA++ GLSL ++ P+D   +++ C  L     +  FP+D  +++  ++R+ +   + K +    R++A N +F   +KE D+ +DE+  ++D G   + A + R + KG+ K+
Sbjct:   88 VPDSVLHALRDLGFYKPTEIQERVIPCAIRDHQDILGAAETGSGKTLAFGIPVVSGILSFKENAKNC---------------------------------------EADSKSHALYCLVLTPTRELAIQIKKHLQAICKYTDIKVAVV--IGGLAPEKQRRILKKSPDIIVATPGRLWEMMEEGESHLSHLSSVRYLVIDEADRMVEKGHFAELTQIIAIINGNKNNKKRQTFVFSATLTLVHDVPKRLILKNKKGKLKKNKLDSLISVIGMKDAHKVIDITKKTAMVDTLVESQIMCSTEEKDLYLYYFLLMYPGRTLIFCNSIDSVRRLRTVLEYLDCNPYPLHSSMHQRQRLKNLERFAASSTAVLLATDVAARGLDIKGIEHVIHFQVPRTAETYVHRSGRTARAQSEGLSLMLIEPQDAVYYKRICKTLNKDKALPQFPVDHCILKTIKDRITLVHSIDKLEHRMKRLTAQNRWFVNAAKEMDIDIDEENLLNDLGDERECAAKCRQI-KGMKKQ 565          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1X1_ECTSI6.130e-26167.65DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KFI4_9PHAE2.750e-21957.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TKC3_9STRA3.730e-5343.79Atp-dependent rna helicase ddx24 (Fragment) n=1 Ta... [more]
A0A836CDB6_9STRA4.260e-5341.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2J7RKC7_9NEOP1.060e-5232.31RNA helicase n=4 Tax=Cryptotermes secundus TaxID=1... [more]
A0A059LKR6_9CHLO5.430e-5233.63DEAD/DEAH box helicase (Fragment) n=1 Tax=Helicosp... [more]
N6TJQ3_DENPD1.830e-5131.85RNA helicase (Fragment) n=2 Tax=Dendroctonus ponde... [more]
A0A1W4XTB4_AGRPL2.290e-5130.42RNA helicase n=1 Tax=Agrilus planipennis TaxID=224... [more]
A0A8J9UEV1_BRAAE2.880e-5128.43Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]
A0A087ULH5_STEMI6.660e-5129.81RNA helicase (Fragment) n=6 Tax=Stegodyphus TaxID=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 581..662
e-value: 2.8E-28
score: 109.9
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 565..661
e-value: 3.3E-25
score: 88.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 556..703
score: 18.789673
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 380..682
e-value: 5.6E-9
score: 45.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 393..514
score: 9.773457
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 385..522
e-value: 8.5E-17
score: 61.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 299..536
e-value: 4.7E-32
score: 113.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 549..742
e-value: 1.0E-37
score: 132.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 400..702
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 335..351
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 237..511
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 544..808
NoneNo IPR availablePANTHERPTHR24031:SF91ATP-DEPENDENT RNA HELICASE DDX24coord: 544..808
coord: 237..511
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 548..653
e-value: 5.34433E-34
score: 124.927
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 361..389
score: 8.905897

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig171contigP-littoralis_Contig171:278820..296412 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig171.88.2mRNA_P-littoralis_Contig171.88.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig171 277836..296526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig171.88.2 ID=prot_P-littoralis_Contig171.88.2|Name=mRNA_P-littoralis_Contig171.88.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=840bp
MSRKRSRKEGAGMQRWDALPWKAIEPPLERDDGWRGMGGEEQALLYTLEE
ISGSDYCVREDTLGGSQSCTAVIHTLAFLAAAAAAVTLPAGPSSQMMAVK
TAPAAGVDVPAAVDGGSDHGSGKTKEKKKVKGTKRKTAPEQQQVEAVAAV
APAAARCGSGGGASGGVEPGATAPAAAAALSGGSAKAAVVVVAAVPREEG
GAPADEVGNGGPDDAAASKGPKKKRRRGQGKKKRAAEAALARAAGAAAGH
VAAEPAASSTGNGDSTPGSEAGADGSARSSAVVVAAGEQQHAGEQTAEAA
AAATADPQKQQLKKRKNKKNKKQQQGQGGEGEGEGEGEAAVRNRERDWEL
GAEETAKMMPWRYLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRK
DIIGAAETGSGKTLAFGLPVLSEILTRRDAATAAAAAAAAEAAAAAAAAA
AAATTKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAH
LREVVRDTGISVVVTAEIGGGEEDAGPAEGSEAAGPPALPSTLKLCSIKS
LQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQ
MQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEV
FIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMR
MVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMD
DAGARADAAVQGRGVGKGLGKKGNQHAARLAAEARQALAASLSRPLHSDR
RKLIPVAQALTDMKAVSVRTAAGDLAGKQRTRSGKQVVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif