mRNA_P-littoralis_Contig171.88.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: D7G1X1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X1_ECTSI) HSP 1 Score: 757 bits (1955), Expect = 6.010e-257 Identity = 571/844 (67.65%), Postives = 600/844 (71.09%), Query Frame = 1
Query: 115 MSRKRSRKEGAGMQRWDALPWKAIEPPLERDDGWRGMGGEEQALLYTLEEISGSDYCVREDTLGGSQSCTAVIHTLAFLAAAAAAVTLPAGPSSQMMAVKTAPAAGVDVPAAVDGGSDHGSGKTKEKKKVKGTKRKTAPEQXXXXXXXXXXXXXXXXXXXXXXXXXXEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGDSTPGSEAGADGSARSSAVVVAAGEQQHAGEQTAEAAXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---RNRERDWELGAEETAKMMPWRYLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVTAEIGGGEEDAGPAEGSE-----AAGPPALPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAAVQGRGVGKGLGKKGNQHAARLAAEARQALAASLSRPLHSDRRKLIPVAQALTDMKAVSVRTAAGDLAGKQRTRSGKQ 2622
MSRKR RK G QRWDALPWK IEPPLERDDGW+GM GEEQALLYTLEEISG+DYC+RED+LGGSQ + + L + V P PS++ M P A D V GG +G + AP XXXXXXXX XXXXXXXXXXXXXX XX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX XXXXXXXXXXXXXXXXXXXX + ERDWELG+EE AKM PW YLGV +HPALLWHLHRQGFHDPTPIQRRVLPKA+LGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAA ++ G + D + EGL +GLQALVLCPTRELALQVAAHLREVVRDTG++VV A AGPA AA PALPSTLKLCSIKSLQMEKDVHAYLFCA YPGRTLIFVNAIAIARRLS LLC+L VPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLH GMQAFPLD+RMVERARERVGMA+RVLKFQEAQNRVSASNDFFRG+SKEADLVMD DL M+DAGA+ DAA QGR KGLGKKGNQHAARLAA ARQALA SLSRPLHSDRRKLIPVAQALTDM+AVS RTAAGDLAGKQRTRSGKQ
Sbjct: 1 MSRKRGRKGAGGGQRWDALPWKTIEPPLERDDGWQGMAGEEQALLYTLEEISGNDYCLREDSLGGSQERSFLAIILCQM------VVAPTTPSAEDM-----PPAAQDSAGGVGGGVGNGKEXXXXXXXXXXXXXRKAPSALAAASEGGSSSKTEGGTAXXXXXXXXXXXXXXXXXXXXXXXXNAAVEGGGAEKTTEDGXXDGEPEASNKGPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNARGEDKGGEEAAEVGQKKSERDWELGSEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAAAA--------------------RLAEGEEAD--QXXXXXXXXEGLHEGLQALVLCPTRELALQVAAHLREVVRDTGVAVVEAAA-------AGPAXXXXXXXXXAAELPALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALSVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVGMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRRGVKGLGKKGNQHAARLAAGARQALAVSLSRPLHSDRRKLIPVAQALTDMRAVSERTAAGDLAGKQRTRSGKQ 804
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A6H5KFI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI4_9PHAE) HSP 1 Score: 655 bits (1689), Expect = 7.820e-215 Identity = 424/736 (57.61%), Postives = 445/736 (60.46%), Query Frame = 1
Query: 1138 RNRERDWELGAEETAKMMPWRYLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVT----AEI--------------------------------------------------------------------------GGG---------------------------EEDAG-----------------------------------PAE---------------------------------------------------------------------------------GSE------AAGP--------------PALPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAAVQGRGVGKGLGKKGNQHAARLAAEARQALAASLSRPLHSDRRKLIPVAQALTDMKAVSVRTAAGDLAGKQRTRSGKQ 2622
+ ERDWELGAEE AKM PW YLGV +HPALLWHLHRQGFHDPTPIQRRVLPKA+LGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAA XXXXXXXXX + G + D E EE + EGL +GLQALVLCPTRELALQVAAHLREVVRDTG++VV AE+ GG EED+G PAE G+E AAGP PALPSTLKLCSIKSLQMEKDVHAYLFCA YPGRTLIFVNAIAIARRLS LLC+L+VPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLH GMQAFPLD+RMVERARERVGMA+RVLKFQEAQNRVSASNDFFRG+SKEADLVMD DL M+DAGA+ DAA QGR KGLGKKGNQHAARLAAEARQALA SLS+PLHSDRRKLIPVAQALTDM+AVS RTAAGDLAGKQRT SGKQ
Sbjct: 251 KKSERDWELGAEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAXXXXXXXXX---------------SDEGGEADQRE--GEEKEREGLHEGLQALVLCPTRELALQVAAHLREVVRDTGVAVVAVVGGLAEVKQQRQLSRRPEVVVATPGRFWEMAGTHAHLSRLETLRHLVVDEADRMLERGHYPELSRLFSMLAKAEGRREGGDGGSSSKSRFEEKFPFDVSEGGEWSVPQEEEEEDSGEGGKMFDDAMDEXXXXXXXXXXXXXXXXASRVRSPPAETNRHDGRGFARQTYVFSATLTLGSSGRQQRKKGGAXXXXXKGKGKRGEGDDDAVKNIMDRVGVRGDPAVIDMGRRTVGGGGGAETGQDAAAAGPAVVDGGAGAGAADLPALPSTLKLCSIKSLQMEKDVHAYLFCAMYPGRTLIFVNAIAIARRLSALLCALNVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHGGMQAFPLDVRMVERARERVGMALRVLKFQEAQNRVSASNDFFRGLSKEADLVMDGDLLMEDAGAKPDAAAQGRRGVKGLGKKGNQHAARLAAEARQALAVSLSQPLHSDRRKLIPVAQALTDMRAVSERTAAGDLAGKQRTSSGKQ 969
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: W7TKC3_9STRA (Atp-dependent rna helicase ddx24 (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKC3_9STRA) HSP 1 Score: 203 bits (517), Expect = 2.180e-52 Identity = 127/290 (43.79%), Postives = 169/290 (58.28%), Query Frame = 1
Query: 1726 ALPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVL-----------------GLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAAVQGRGVGKGLGKKGNQHAARLAAEARQALAASLSRPLHSDRRKLIPVAQAL 2544
ALP+ LKLC +KS+ KD + Y F +PGRT++F N+I RRL+ LL L +PA LHA+MQQR RLKSLD F + +AVLVATDVAARGLDIP VEHV+HYD RS EVF+HRAGRTARA GLS S+VAPRD+ H + C L G GM FP+D++ + RERV +A +++ ++ R A+ +F ++EADL +DE+L + K G + + +R R+ L LS+P+ RRK I VA +L
Sbjct: 223 ALPAGLKLCHVKSVGAHKDAYLYYFLRRHPGRTIVFTNSIDQTRRLAQLLSLLRLPARALHAKMQQRARLKSLDCFRAQRQAVLVATDVAARGLDIPLVEHVIHYDMPRSLEVFVHRAGRTARANREGLSFSMVAPRDEKFHDEVCRALFASSPSQRPEHPKEASGGSGAGMLPFPVDLQELNATRERVHLAGKIVGHEQETGRQQATQSWFLKRAREADLDLDEELLNE----------------KEHGTEKERQRSRQMEMDRKRLNELLSQPMVQQRRKFINVADSL 496
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A836CDB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDB6_9STRA) HSP 1 Score: 211 bits (538), Expect = 3.490e-52 Identity = 133/323 (41.18%), Postives = 182/323 (56.35%), Query Frame = 1
Query: 1705 SEAAGPPALPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVR---------------------------VLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAAVQGRGVGKGLGKKGNQHAARLAAEARQALAASLSRPLHSDRRKLIPVAQALTDMKAVSVRTAAGDLA 2592
S AA PALP L L KSLQ +KD YLF +PGRTL+FVNA+ +ARR++ +L L +P PLHAQM QR RL++LD + + ++ATDVAARGLD+P V+HVVHYDA RSA F+HR+GRTARA G +LSI+APRD+A + + +G G+ A P D R++++ARER +A R V + + AQ + A+ ++ +AD+V+DE A ADA +G G +G H L+ PL SDRRK +PVA+ L + A + RTAAG++A
Sbjct: 776 SGAAPLPALPEGLTLAQTKSLQADKDAWLYLFATQFPGRTLVFVNAVVMARRVAQVLQLLRIPCAPLHAQMAQRARLRALDFLRTSERCCVIATDVAARGLDVPHVDHVVHYDAPRSAADFVHRSGRTARAGRGGFALSIIAPRDEAAFARVFAAVGYPAGLPALPCDPRLLDKARERALLAARXXXXXXXXXXXXXXXXXXXXXRCLGEAVTRCEAAQGKAGAARTLLSSLAGDADMVVDEAAL-----AIADA--------EGGGARGGAHXXXXXXXXXXXXXXXLAEPLFSDRRKFLPVAEKLAEAAAEARRTAAGEVA 1085
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A2J7RKC7_9NEOP (RNA helicase n=4 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RKC7_9NEOP) HSP 1 Score: 206 bits (524), Expect = 7.380e-52 Identity = 168/520 (32.31%), Postives = 230/520 (44.23%), Query Frame = 1
Query: 1180 AKMMPWRYLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVA----------EEGKSEGL-QDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVTAEIGG---GEEDAGPAEGSE--AAGPPAL--------PSTLKLCSIKSLQM-------------------------------------------------------------------------------------------------------EKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEAD-LVMDEDL 2355
+KM W GVGI +L L QGF +PT IQ + LP A+LGR+DI+GAAETGSGKTLAFG+P+L IL D + E D + E+V + G Q L ALVL PTRELA+QV HL R TGI + V +GG +++ + G E A P L P ++ +I+ L + EKDV+ Y F +PGRTLIF N+I+ RRL+ LL L PLHA M QRQRLK+LDRF + + +L+ATDVAARGLDIP V+HV+HY R++E ++HR+GRTARA+ GL+L ++ P + ++ + C LG + FP+ ++ A++RV +A + + + A + S +FR E D LV DEDL
Sbjct: 132 SKMSAWH--GVGIMSPILRALEEQGFVEPTEIQAKTLPAAVLGRRDILGAAETGSGKTLAFGIPILHRIL--EDRGQSAGRYNLVHAKRTIEAEPCQSENEYEEHEDENSREMVGLGCVQVMKDVSPHNTPGCSQSKLYALVLTPTRELAMQVHKHLTAAARYTGIKIAVV--VGGMAPQKQERLLSRGPEIVVATPGRLWELIQDGNPHLAQVSNIRCLAIDETDRMLERGHFQELHNLLELLNVDEGKKRQRQNFVFSATLTMVHEPPRRLKSRNKKLRLTPGQKLQNIMTMLGVTNPKVVDVTKESGTAGTLTEARIVCALEEKDVYLYYFIQQHPGRTLIFCNSISCVRRLAQLLSLLQCRPLPLHANMMQRQRLKNLDRFRDNSRGLLLATDVAARGLDIPGVQHVIHYQVPRTSETYVHRSGRTARAQKEGLTLLLIEPTEVPHYTRLCRTLGRTKDLPLFPISSSLLAAAKQRVTLAQELDRLELATRKSSTETGWFRKALTEMDMLVDDEDL 645
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A059LKR6_9CHLO (DEAD/DEAH box helicase (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LKR6_9CHLO) HSP 1 Score: 204 bits (520), Expect = 3.640e-51 Identity = 152/452 (33.63%), Postives = 217/452 (48.01%), Query Frame = 1
Query: 1186 MMPWRYLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVTAEIGG-------------GEEDAGPA----EGSEAAGPPA----------------------------------------------LPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDED 2352
M WR G+ +L L GF +PTPIQ V+ A+ +D++GAA+TGSGKTLAFGLP++ +L R ++E+ +G G + + L+AL++ PTRELALQV HL V R G+ VV +GG E G E +A+GP A + S + S++ + +DV Y +PGRTL+FVNAIA ARRL+ +L L +P LHA+ QQRQRLK+LDRF +AVLVATDVAARGLDIP V VVHY + + ++HR+GRTARA GL++++V P++ A ++ L + FPLD + A+ RV +A+RV + + A + R +++ DL++ ED
Sbjct: 172 MDSWRI--YGLSEPVLSALGALGFEEPTPIQAAVVEAAVRDGRDVLGAAQTGSGKTLAFGLPIIERLLRER---------------------------RLEAREEG---------GAAPARRRCLKALIVAPTRELALQVQQHLERVARPCGLRVVPV--VGGLAIQKQERQLVKRPEIVVGTPGRLWEVMQASGPAASHLCSLGGLRALVIDEADSMVMPGRFVELKSIVDRPLVVDLTPERQVASGVAEASLQCTEESRDVQLYCLLQQHPGRTLVFVNAIAAARRLTAILKILGLPVQALHAEQQQRQRLKALDRFRDSEQAVLVATDVAARGLDIPGVACVVHYQLPATLDSYVHRSGRTARAEKEGLAVAMVMPKEAARYQALLRALNKAEAPPPFPLDPGVYLEAKRRVSLALRVDALERGAAKQHADRAWRRTQARDMDLLLSED 583
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A8J9UEV1_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UEV1_BRAAE) HSP 1 Score: 203 bits (516), Expect = 7.180e-51 Identity = 172/605 (28.43%), Postives = 258/605 (42.64%), Query Frame = 1
Query: 1201 YLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVTAEIGG-----------------------------------------------------------------------------------------------------------------------------GEEDAGPAEGSEAAGPPALPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAAVQGRGVGKGLGKKGNQHAARLAAEARQALAASLSRPLH----------SDRRKLIPVAQALTDMKAVSVRTAAGDLAGKQRTR 2610
+L + ++L L F +PT IQ LP AILGRK+I+GAAETGSGKTLAFGLP+L+ IL ++ ++E + G V A + K + Q L AL+L PTRELA+Q+ +HL +V + TGI++ V +GG G +D + ++ G STL C I +KD + Y F +PGRTLIF N+I +RL+ LL LD PLHA MQQRQRLK+L+RFT D +L+ATDVAARGLDIP VEHV+HY R++E ++HR+GRTARA G+++ ++ P + N+ + C LG + + FP+ + ++RV +A + K Q + ++ + ++E D+++D+ + K K Q + +LA R+ LA+ LS+P+ + ++P+ + KAV V AA + KQ++R
Sbjct: 103 WLNFDLPESILKALAELKFKEPTQIQSLTLPSAILGRKNILGAAETGSGKTLAFGLPILTGILKIKEK-----------DGDNIEENSDDSEEELEDLDENGHGCVNAYKIKEKHPQKPLYALILTPTRELAMQIKSHLTKVAKYTGINIAVV--VGGMAAVKQERLLGKFPEIVVATPGRLWELIQQGNQHLSQVDKIRFLAIDETDRMLERGHFQELHSLIEKINVDEEILKKRQSFVFSATLTLIHDIPRHLINKQKIKGRRNLKDMTPEQKLLKIVNSLGIKDPKIVDITQGTG---TSSTLTECRITCKITDKDFYVYYFLQKHPGRTLIFCNSIGCVKRLNTLLTLLDCHPLPLHASMQQRQRLKNLERFTEDELGILIATDVAARGLDIPSVEHVLHYQTPRTSESYVHRSGRTARASKEGITVLLIEPTELPNYLKLCRTLGKDEDLPIFPVQENYLNAVKQRVNLARELDKLQLQVKKATSETGWLEKAAEEMDIIVDD-------------------MAKRYDTKEAQKSKKLAEIKRKHLASMLSKPVFPKGFSGKYPLATGELVLPMEVTDQNEKAVDVMKAAVETYSKQKSR 672
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: N6TJQ3_DENPD (RNA helicase (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6TJQ3_DENPD) HSP 1 Score: 201 bits (511), Expect = 1.040e-50 Identity = 157/493 (31.85%), Postives = 224/493 (45.44%), Query Frame = 1
Query: 1228 LLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDG-GEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISV-VVTAEIGGGEEDAGPAEGSE-AAGPPA----------------------------------------------------------------------LPS-----------------------------------------------TLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMD 2346
LL L QGF PT IQ LP A+LGR+DI+GAAETGSGKTLAFGLP+LS I+ R+A + G D G G V A + KS ++ L AL+L PTRELA+QV HL +V + TGI++ VV + +++ +G E G P +P TL C I EKD + + F +PGRTLIF N+I +RL+ LL L+ PLHA MQQRQRLK+L++FT ++L+ATDVAARGLDIP+++HV+HY R++E ++HR+GRTARA GL++ ++ P + N+ + C LG D + FP+ + + +ERV +A ++ K Q + +A + + ++E D+V+D
Sbjct: 90 LLRALQEQGFSYPTEIQAHTLPAALLGRRDILGAAETGSGKTLAFGLPILSGIMRLREAGIADEAADSEYSESEDE----------DIGVDEHGMGCVNAYKLKSAEVRRPLYALILTPTRELAMQVKNHLTKVAKYTGINIAVVVGGMAAVKQERLLRKGPEIVVGTPGRLWELIQQGNEHLSQIDNIKFLAIDETDRMLEKGHFMELHDLLEKMNLDQQKKSERQNFVFSATLTLIHDIPKHLVLKRKIKGRKLHDMTAEQKVQKIVNTLGITNPKIVDLSQGKGTSGTLSECRITCDIEEKDYYVFYFLKKHPGRTLIFCNSIGCVKRLTNLLGLLNCSPLPLHASMQQRQRLKNLEKFTETENSILIATDVAARGLDIPEIDHVLHYQTPRTSESYVHRSGRTARASVQGLTILLMEPSEFTNYMKMCKTLG-KDNLPPFPVQDKYLSAVKERVNLARQLDKLQLQVRKFNAEEGWLQKAAREMDIVVD 571
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A1W4XTB4_AGRPL (RNA helicase n=1 Tax=Agrilus planipennis TaxID=224129 RepID=A0A1W4XTB4_AGRPL) HSP 1 Score: 202 bits (513), Expect = 1.370e-50 Identity = 160/526 (30.42%), Postives = 222/526 (42.21%), Query Frame = 1
Query: 1171 EETAKMMPWRYLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVTAEIGGGEED--------------AGPAEGSEAA--GPPALPS-------------------------------------------------------------------------------------------------------TLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAA 2391
EE M W G + +L+ L Q F PT IQ LP AILG+KDI+GAAETGSGKTLAFGLP+LS IL R++ KS + L AL+L PTRELA+QV HL + T I + V +GG + A P E G L S TL C I EKD + Y F YPGRTLIF N+I +RL+ LL L + PLHA MQQRQRLK+LDRF DP+++L+ATDVAARGLDIP V+HV+HY R++E ++HR+GRTARA G+++ ++ P + ++ + C LG + M FP+ ++ ++RV +A V K + + S+ + + + + D+++D+DL ++ D+A
Sbjct: 96 EEVKNMEAWHKFG--LQESLIKALADQNFLYPTHIQALTLPSAILGKKDILGAAETGSGKTLAFGLPILSGILKRKELLDH----------------------------------------KSSDEFNPLNALILTPTRELAIQVKNHLTAAAKYTDIKIAVV--VGGMSAEKQERLLSKNPEIVVATPGRLWELIQLGNSHLSSIDKIRFLAIDETDRMLERGHFQELHDILEKINLMQNEQKNRQNFVFSATLTLEHELPKHLLLKRGRKINKSSSEYKLKKIIELIGMTNPKVVDITDRTGKTVQTLTECRISCSIDEKDYYIYYFLKKYPGRTLIFCNSIGCVKRLNSLLSVLQINVLPLHASMQQRQRLKNLDRFRDDPQSILIATDVAARGLDIPSVDHVLHYQMPRTSESYVHRSGRTARASKDGITVLLIDPSELQSYLRLCRTLGKGEDMPLFPVQQNILAAVKQRVNLAREVEKLELQNRKKSSEKGWLQKAADDMDIILDDDLVKEEEDNFLDSA 577
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Match: A0A2U1JB49_SMIAN (Uncharacterized protein n=1 Tax=Smittium angustum TaxID=133377 RepID=A0A2U1JB49_SMIAN) HSP 1 Score: 201 bits (510), Expect = 4.880e-50 Identity = 153/488 (31.35%), Postives = 230/488 (47.13%), Query Frame = 1
Query: 1198 RYLGVGIHPALLWHLHRQGFHDPTPIQRRVLPKAILGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAATXXXXXXXXXXXXXXXXXXXXXXXKMESGADGDGGEVVAEEGKSEGLQDGLQALVLCPTRELALQVAAHLREVVRDTGISVVVTAEIGGG-----------------------------------------------------EEDAGPAEGSEAAGPPALPSTLKLCSIKSLQMEKDVHAYLFCATYPGRTLIFVNAIAIARRLSVLLCSLDVPATPLHAQMQQRQRLKSLDRFTSDPKAVLVATDVAARGLDIPKVEHVVHYDAARSAEVFIHRAGRTARARAAGLSLSIVAPRDDANHRQTCSVLGLHDGMQAFPLDMRMVERARERVGMAVRVLKFQEAQNRVSASNDFFRGMSKEADLVMDEDLFMDDAGARADAAVQGRGVGKGLGKKGNQHAARLAAEARQALAASLSRPL 2502
++ +GIH LL L GF DPT IQ R +P A+ GR D++GAA+TGSGKTLAFGLP+ +I+ + A T GE L A++L PTRELA+QV HL + + I++V I GG E+D P +GS + + I LQ +K+ + Y F + G+TL+FVN+I++ RRL +L +L + PLHAQMQQRQRLK+LDRF S VL+++DVAARGLDIP V+HV+HY R E+++HR+GRTAR G+ + V P + +N+ + C L + + FP++ ++ + + V ++ + + N+ S D+ ++E D+ +D D + R D+ + V +K Q A L R+ L A+LS+P+
Sbjct: 252 KWTNLGIHHLLLKGLGDCGFTDPTEIQERAIPVALKGR-DVLGAAQTGSGKTLAFGLPICQKIVKLKSANTDSR------------------------------GE--------------LSAIILVPTRELAIQVKDHLVNISKHQKINIV---SIVGGMSLQKQERLIKQSPDILVATPGRLWEIVEQTDLLSQKLNKIQFLVLDEADRMLEQDITP-KGS-------ISDQISEARIDCLQPDKETYLYYFLTRFTGKTLVFVNSISLVRRLIPILTNLKIQVYPLHAQMQQRQRLKNLDRFKSAKNGVLISSDVAARGLDIPLVDHVIHYQVPRGGELYVHRSGRTARGHNEGVVVVFVCPEERSNYMRLCKTLKRSE-INHFPVEFNIITKIKPIVKLSREIDTIEHKANKESHEKDWILKAAEEMDIEVDYDFIKPKSRGRYDSDEEELMV-----EKERQKAKNL----REKLNAALSKPI 673 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig171.88.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig171.88.2 >prot_P-littoralis_Contig171.88.2 ID=prot_P-littoralis_Contig171.88.2|Name=mRNA_P-littoralis_Contig171.88.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=840bp MSRKRSRKEGAGMQRWDALPWKAIEPPLERDDGWRGMGGEEQALLYTLEEback to top mRNA from alignment at P-littoralis_Contig171:277836..296526- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig171.88.2 ID=mRNA_P-littoralis_Contig171.88.2|Name=mRNA_P-littoralis_Contig171.88.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=18691bp|location=Sequence derived from alignment at P-littoralis_Contig171:277836..296526- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig171:277836..296526- >mRNA_P-littoralis_Contig171.88.2 ID=mRNA_P-littoralis_Contig171.88.2|Name=mRNA_P-littoralis_Contig171.88.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2520bp|location=Sequence derived from alignment at P-littoralis_Contig171:277836..296526- (Pylaiella littoralis U1_48)back to top |