mRNA_P-littoralis_Contig171.1.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig171.1.3
Unique NamemRNA_P-littoralis_Contig171.1.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 918 bits (2372), Expect = 0.000e+0
Identity = 524/898 (58.35%), Postives = 590/898 (65.70%), Query Frame = 3
Query:  780 REAHMNSFMAK*HSYVSLVNRYRASIGELFRAAAQVGGPDIPMFGDFDDREGFNGACPSDPYLRDVWHTWFYRTPVIQMCRLRQADGIRMTRQDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILNECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAPLEAFAFPEDKKGHVVWDDKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDPA----------------RVCCRHG------HFPFFSWQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDPDAYQDDFFDAPKLHRRVL---GD-----EDDESSDDDTPDESGAGVHASSV----GGADASGASADNS--PQERNRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYHRYLRTLLAS*CASLALAHSVLLGFSFRWDVKMMVKNRGLPAALGGHYNQYLVELIHRATACWDPSCPVFPEWPAAVDLVDAGERSGLARSLWGGESDGELDGGG 3365
            REA+MNS+M + HSYVSLVNR R SIG   RAAA+ G PDIP FG F D+EGFNGA PSD YLR VWH WFY T VI+      ADG+RMTR+DYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAG S  +KPIQG+FTILNE EQA                                                                            A GGA L A  FPE K G  V+D  AID+AVA LV  C TQG VLGMDCEWEP F+GSSE  VCTLQLALPDGT+ LFH QRG R  T ST N NLKRLL D +ITKVGVAV+GDG RLQRDYDVETRGMVDLRSYARACWVDL CRSLAGMTATAL K L KD A                   C         H     ++  ++    +   A GT +T++ A SLLEKWGT LTL GR GTRSGG +RVVVKV + LKP SFVPH  APPPA D     G +RV+VKD+    GFVLWD+VHVRLA AHRSF GTP+P G +D DA+QDDFFDAP+  + V    GD     E D  SDDDT  ESGAG   +S     GG  AS    D +   QE    MF VRLDLFHALNR+SRT+KKGHGAF+P MARLRDACFLVNRDD+ Q+E VLE RGM+P  VQQ K+++W+ FLR CRRLVPPP EL +RFD+V++EFG CVDN S+EV+LRPK+MKAV LLRKHIV+GCLSDP+G+AM YA+GK   GL  YRCVRGTNDVEGYHRYLRTLLAS CAS ALA SVLL F+FRW++KMMVKNRGLPA LG HYNQ+LVE+I RAT           E P  + +      SG  R  W   +  EL GGG
Sbjct:    2 REAYMNSYMMQYHSYVSLVNRCRRSIGGHVRAAAEEGAPDIPTFGGFGDKEGFNGAWPSDQYLRAVWHKWFYDTVVIE------ADGVRMTREDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGESTKSKPIQGIFTILNEYEQA----------------------------------------------------------------------------AEGGAELAALTFPEGKTGVRVFDKTAIDIAVANLVGGCATQGMVLGMDCEWEPAFNGSSERPVCTLQLALPDGTSSLFHLQRGGRGITPSTFNTNLKRLLGDLAITKVGVAVKGDGKRLQRDYDVETRGMVDLRSYARACWVDLPCRSLAGMTATALGKYLSKDAAGRFSHWSRPELTPNQIEYACLDAYAAVLLHAEIGKFKDPIFGEAPSEVPAAGT-KTEEEATSLLEKWGTVLTLGGRVGTRSGGLQRVVVKVDNALKPSSFVPHDKAPPPAQD-----GQRRVTVKDVVDGAGFVLWDIVHVRLASAHRSFEGTPLPGGAADADAHQDDFFDAPRPAQAVYQNGGDVESDLEADSESDDDTFGESGAGADLASSEASSGGPSASXXXXDAAVASQEEAGDMFFVRLDLFHALNRLSRTIKKGHGAFRPIMARLRDACFLVNRDDVLQIEKVLERRGMSPAQVQQAKDQDWSYFLRKCRRLVPPPSELLKRFDKVVQEFGNCVDNISKEVLLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKTTDGLVNYRCVRGTNDVEGYHRYLRTLLASYCASPALAQSVLLEFNFRWNLKMMVKNRGLPAELGEHYNQHLVEIIQRAT-----------ELPRLLAMASRRRFSGHRREEW---ARPELGGGG 797          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 833 bits (2152), Expect = 6.030e-281
Identity = 458/731 (62.65%), Postives = 509/731 (69.63%), Query Frame = 3
Query: 1428 DATASEAAAGGAPLEAFAFPEDKKGHVVWDDKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDPAR---------------------------------------VCCRHGHFPFFSWQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADE--QPREGVKRVSVKDMHSE---EGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDPDAYQDDFFDAPKLHRRV----------LGDEDDESSDDDTPDESGAGVHASSV--------GGADASGASADN------------SPQERNRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQ-------------VEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYHRYLRTLLAS*CASLALAHSVLLGFSFRWDVKMMVKNRGLPAALGGHYNQYLVELIHRATACWDPSCPVFPEWPAAVDLVDAGERSGLARSLWGGESDGELDG 3359
            DA ++E  AGGA LE F+FPE K+G+VVWD+KAI+LAV   VE CK QG VLGMDCEWEPPFDGSSE AVCTLQLALPDGTAYLFH QRG RRT  ST NR+LK LLNDP+ITKVGVAV+GDG+RLQRDY VET GMVDLRSYAR CWVDL CRSLAGM ATAL KSL K+P+                                         C      P    +VRLYTNNH SCV +G VQ ++ ARSL+EKWGTDL L  R GTRSGG KRVVVKVVDVLKP S  PH+ APP       QPR  V   S+ D+HS    EGFVLWD+VHVRLA  H  F+G PVPA  +DPDA+ D+FFD P+  + V          LG E D SSDDDT DES AGV A           G A A+                  +P+E + G+FSVRLD FH LNRISR  KK HGAFKPFMARLRDACFLVNRDD+ Q             VEM LEARGM PE VQQ+ E+NW+ FLRS RRLVP  D L +RFDRVIEEFGGCVDN S EV+LRPKAMKAVR LRKHI + CLSDP+GMAM +AIGKNK GLT YRCVRGTNDVEGYHRYLRTLLAS CAS +LA SVLL F++RW+++MM+KNRGLPAALGGHYNQYLVE I R TA WD S PVFPEWPAA+D VD GER GL RSLWGGE DGE+ G
Sbjct:   39 DAASTEETAGGAVLETFSFPEGKEGYVVWDEKAINLAVMEFVEGCKQQGHVLGMDCEWEPPFDGSSEGAVCTLQLALPDGTAYLFHLQRGTRRTRPSTFNRSLKVLLNDPTITKVGVAVKGDGSRLQRDYGVETCGMVDLRSYARTCWVDLPCRSLAGMVATALGKSLSKNPSVRFSRWSQAELTQNQVNYACLDAYAAVVLHAEIGKSKDPIFCMAPSDIPIAGTEVRLYTNNHESCVGVGQVQDEEAARSLVEKWGTDLKLAQREGTRSGGLKRVVVKVVDVLKPASLTPHQDAPPXXXXXXGQPRVAV---SMNDVHSGKGFEGFVLWDLVHVRLASDHHPFQGIPVPAASADPDAHVDNFFDEPRPAQAVYQNDGDVESALGGEPDGSSDDDTLDESAAGVGAXXXXXXXXXXKGAASAAXXXXXXXXXXXXXXXXXXAPEEPH-GVFSVRLDPFHTLNRISRMTKKSHGAFKPFMARLRDACFLVNRDDVYQASLKPFGWIWERSVEMTLEARGMKPEEVQQLTEQNWSFFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNKHGLTDYRCVRGTNDVEGYHRYLRTLLASYCASPSLAQSVLLEFNYRWNLRMMIKNRGLPAALGGHYNQYLVESIQRDTADWDSSHPVFPEWPAAIDSVDTGERFGLERSLWGGERDGEVWG 765          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 756 bits (1951), Expect = 1.980e-245
Identity = 453/885 (51.19%), Postives = 527/885 (59.55%), Query Frame = 3
Query:  711 SLIARLADDLLNGKGFSATSKFTREAHMNSFMAK*HSYVSLVNRYRASIGELFRAAAQVGGPDIPMFGDFDDREGFNGACPSDPYLRDVWHTWFYRTPVIQMCRLRQADGIRMTRQDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILNECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAPLEAFAFPEDKKGHVVWDDKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDPARVCCRHGHFPFFSWQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDPDAYQDDFFDAPKLHRRVLGDEDDESSDDDTPDESGAGVHASSVGGADASGASADNSPQERNRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYHRYLRTLLAS*CASLALAHSVLLGFSFRWDVKMMVKNRGLPAALGGHYNQYLVELIHRATACWDPSCPVFPEWPAAVDLVDAGERSGLARSLWGGESDGELDGGG 3365
            +++ARLADDLLNGKGFSATSKF REA+MNS+M + HSYVSLVNR + SIG  FRAAA+ G PDIP+FG F DREGFNGA PSD YLR VWH WFY T VI++ R    D  +                    G  S   ++V                                VFQKAMKT+S+H LKSDLKNLF+NRY+GHGFKL V+L S           AMFREIE+ T V L+DAT ++AA GGA L A  FPE K G  V+D  AID+AVA L+  C TQG VLGMDCEWEP  +GSSE  VCTLQLALPDG ++LFH QRG R T  +T N +LKRLLNDP+ITK+  A                     L +YA            A +  T +     KDP          P    +VRLYTNNHASCVA+G VQT+  A SLLEKWGT LTL GR GTRSGG +RVVVKV + LKP SFVPH  APPPA     + G  RVS+KD+ + +GFVLWD+VHVRLA AHRSF GTP+P G +D DAYQ DFFDAP+  + V  +            E  A  HA+S GG  ASGA AD +                                                     QVE VLE RGMTP   +QVK+ NW+ FL+ CRRLVPPP EL + FD+V+EEFG CVDN S+E +LRPK+MKAVRLLRKHIV+GCLSDP+G+AM YAIGK   GL +YRCVRGTNDVEGYH      LAS  AS ALA SVLL F+FRW++KMMVKNR                        WDPS PVFP+W AAVD VD GERSGL RSLWGGE+    +G G
Sbjct:  329 AVVARLADDLLNGKGFSATSKFKREAYMNSYMMQYHSYVSLVNRCQRSIGGHFRAAAEEGTPDIPIFGGFGDREGFNGAWPSDQYLRAVWHKWFYETVVIEVRRFLMLDFSQ--------------------GACSLLVSQV--------------------------------VFQKAMKTSSVHDLKSDLKNLFVNRYIGHGFKLLVILFS-----------AMFREIEEETRVLLFDATGAKAAEGGAELAALTFPEGKTGVRVFDKTAIDIAVATLIGGCSTQGMVLGMDCEWEPALNGSSERPVCTLQLALPDGISFLFHLQRGVRGTKPATFNTSLKRLLNDPAITKIEYAC--------------------LDAYA------------AVLLHTEIGN--FKDPI-FSEAPSEVPAAGTKVRLYTNNHASCVAVGHVQTEDEASSLLEKWGTVLTLGGRVGTRSGGLRRVVVKVNNALKPFSFVPHDTAPPPA-----QHGQGRVSIKDVVAGDGFVLWDLVHVRLASAHRSFEGTPLPGGAADADAYQHDFFDAPRPAQAVYHNVRSMQVLIWRAVEQ-AVEHAASSGGPSASGADADAAVAS--------------------------------------------------QVEKVLECRGMTPAQAEQVKDHNWSFFLKRCRRLVPPPSELLKPFDKVVEEFGNCVDNVSKEALLRPKSMKAVRLLRKHIVAGCLSDPDGVAMYYAIGKTTDGLVRYRCVRGTNDVEGYH------LASYSASPALAQSVLLEFNFRWNLKMMVKNRD-----------------------WDPSFPVFPQWQAAVDSVDTGERSGLGRSLWGGENAKAWNGAG 1030          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 623 bits (1607), Expect = 9.500e-202
Identity = 368/834 (44.12%), Postives = 478/834 (57.31%), Query Frame = 3
Query:  708 KSLIARLADDLLNGKGFSATSKFTREAHMNSFMAK*HSYVSLVNRYRASIGELFRAAAQVGGPDIPMFGDFDDREGFNGACPSDPYLRDVWHTWFYRTPVIQMCRLRQADGIRMTRQDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILNECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAP----LEAFAFPEDKKGHVVWDDKAIDLA--VAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDPARVCCRHGHFPFFSWQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDP-DAYQDD--FFDAPKLHRRVLGDEDDESSDDDTPDESG-----------------AGVHASSVGGADASGASADNSPQER-----------------------------NRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVE 3044
            KS++ RLADDLL G GF+A SK     +   +  +  SYVSL NR  +    ++     V    IP F    D  GF+ + PS  YL D+WH  FY TPV+Q      ADG   TR++YLQR  QLVDG  LAGDASFKYAKVIRL++  +    +P+ G+FTI+NE +Q     VF KAM TAS+H LK+DLK +F+ R+LGHGFKLPV+  SD CC+DR + + MF+EIE  TG  LYD   +E A GG+P    L A  FP  K+G  V+D +   +A  V AL++ C+ QG+VLG+DCEWEP   G++ + V T+QL+LPDGTAY F  QRG ++TTSS   + L+ LL +PSI KVGV +  D T L+RDY +E    VDLR+YAR CWV+   RSLAGM ++ L + L KDP     R    P    QVRLY+NNHASCV +G VQ    A   L  W            R G   +VVV +  V KP ++  HKGAP  A+      GV RV++ + +  +  VLWDV HVRL    +       P+   +  +AY D+  FF +P+    V   +D++  D D  +  G                 AGV A   GG   +G                                        +    VRLD+FHAL RISR  KK HGAFKPFMARL+DACF+VN+DDI++VE  L ++GMTPE V + K+++W  FLR+CRRLVP    L ERF+ VI +F   VD  S EV++ PK M+AV  LRKHI S  LSDP+G+ + Y  G+N  G+T  RCVRGTN  E
Sbjct:  141 KSVVDRLADDLLEGTGFAAASKSLANTYHARYFNQLRSYVSLANRCVSRHKGMW---PNVDLGMIPKFSSIGDPSGFHSSPPSAHYLGDIWHKGFYETPVVQ------ADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQV----VFSKAMTTASVHDLKNDLKMMFVKRFLGHGFKLPVIFYSDECCDDRQLLLTMFKEIELETGARLYDT--AEEAGGGSPGVEVLPALEFPPGKRGECVFDFRPNSIAPSVVALIDGCQLQGNVLGLDCEWEPSLGGTTPNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYLERDYGIEVANTVDLRTYARQCWVETPSRSLAGMASSLLGRQLPKDPVIRLSRWSS-PLSDDQVRLYSNNHASCVGVGEVQDDDTAAEALAGWFPG-------ARRKGRLTQVVVGLSGVFKPAAYTAHKGAPRAAS------GVGRVTMDEAYKGDRLVLWDVAHVRLVSDWKPSPAAAAPSSNENASEAYNDNAQFFTSPRPPHVVRLQDDEDPDDGDEEEYDGHDCGDLGSSARGDHGLWAGVEAGGGGGGAVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXGGDVDMDDWLGDEQCALQVRLDIFHALQRISRLCKKSHGAFKPFMARLKDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKSWTYFLRNCRRLVPERQRLLERFNSVINQFCNVVDAKSGEVLILPKVMQAVDQLRKHIESDRLSDPHGVPLYYTTGQNAAGITTRRCVRGTNCTE 945          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI)

HSP 1 Score: 550 bits (1416), Expect = 1.350e-176
Identity = 324/769 (42.13%), Postives = 427/769 (55.53%), Query Frame = 3
Query: 1248 MKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAP----LEAFAFPEDKKGHVVWDDKAIDLA--VAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDPARVCCRHG------------HFPFFS---------WQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDP-DAYQDD--FFDAPKLHRRVLGDEDDESSDDDTPDESG-----------------AGVHASSVGGADASGASADNSPQER-----------------------------NRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYHRYLRTLLAS*CASLALAHSVLLGFSFRWDVKMMVKNRGLPAALGGHYNQYLVELIHRATACWDPSCPVFPEWPAAVDLVDAGERSGLARSL 3326
            M TAS+H LK+DLK +F+ R+LGHGFKLPV+  SD CC+DR + + MF+EIE  TG  LYD   +E A GG+P    L A  FP  K+G  V+D +   +A  V AL + C+ QG+VLG+DCEWEP   G++ + V T+QL+LPDGTAY F  QRG ++TTSS   + L+ LL +PSI KVGV +  D T L+RDY +E    VDLR+YAR CWV+   RSLAGM ++ L + L KDP     R                P FS          +VRLY+NNHASCV +G VQ    A   L  W            R G   +VVV +  V KP ++  HKG P  A+      GV RV++ + +  +  VLWDV HVRL    +       P+   +  +AY D+  FF +P+    V   +D++  D D  +  G                 AGV A   GG   +G                                        +    VRLD+FHAL RISR  KK HGAFKPFMARLRDACF+VN+DDI++VE  L ++GMTPE V + K++NW  FLR+CRRLVP    L ERF+ VI +F   VD  S EV++RPKAM+AV  LRKHI S CLSDP+G+ + Y  G+N  G+T  RCVRGTN  E                          F++RW+++M VKNRGLP  +G  ++Q+ +E+I R T+ W P  P+FPEW +A+D  D GE+SGL++SL
Sbjct:    1 MTTASVHDLKNDLKMMFVKRFLGHGFKLPVIF-SDECCDDRQLLLTMFKEIELETGARLYDT--AEEAGGGSPGVEVLPALEFPPGKRGECVFDFRPNSIAPSVVALTDGCQLQGNVLGLDCEWEPSLAGTTPNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYLERDYGIEVANTVDLRTYARQCWVETPSRSLAGMASSLLGRQLPKDPVIRSSRWSSPLSDNQEVAKFQDPIFSPPPVELHPGTKVRLYSNNHASCVGVGEVQDDDTAAEALAGWFPG-------ARRKGRLTQVVVGLSGVFKPAAYTAHKGTPSAAS------GVGRVTMDEAYKGDRLVLWDVAHVRLVSDWKPSPAAAAPSSNENASEAYNDNAQFFTSPRPPHVVRLQDDEDPDDGDEEEYDGHDCGDLGSSARGDHGFWAGVEAGGGGGGAVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVDMDDWLGDEQCALQVRLDIFHALQRISRLCKKSHGAFKPFMARLRDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKNWTYFLRNCRRLVPERQRLLERFNSVINQFCNVVDAKSGEVLIRPKAMQAVDQLRKHIESDCLSDPHGVPLYYTTGQNAAGITTRRCVRGTNYTE--------------------------FNYRWNIRMAVKNRGLPREVGEFFDQFEIEIIQRETSSWYPDNPLFPEWISALDAADTGEKSGLSQSL 727          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 2.480e-103
Identity = 201/445 (45.17%), Postives = 255/445 (57.30%), Query Frame = 3
Query: 2160 VLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEG--FVLWDVVHVRLAPAHRSFRGTPVP-AGGSDPDAYQD-DFFDAPKLHRRVLGDEDDESSDDDTPD-----------ESGAGVHASSVGGADASGASADNSPQE-----------------------------RNRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQ---VEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYHRYLRTLLAS*CASLALAHSVLLGFSFRWDVKMMVKNRGLPAALGGHYNQYLVELIHRATACWDPSCPVFPEWPAAVDLVDAGERSGLARSLWGGESDGEL 3353
            V KP +++PHKGAP  A+      GV RV++KD +S++G   VLWD+ HVRL    +       P A  +D  AY D D F A K    V+  +DDE                    SG G H    GG                                                  VRLD+FHAL R+S+  KK HGAFKPFMARLRDACF+VN DDI++   VE  L  +GMTPE V + K++NW  F+R+CRRLVP    L ERF+ VI +F   VD  S E +LRP A +AV LLRKHI SGCLSDP  + + Y  GKN  G+T  RCVRGTN  EGYHRY+R LL++ CAS +LAHSVLL F++RW+V+M VKNRGLP  +G  ++Q+ +E+I R TA W P  P+FPEW +A+D  D GE+SGL+ SLWG  S G++
Sbjct:    5 VFKPAAYIPHKGAPRAAS------GVGRVTMKDANSDKGDRLVLWDIAHVRLVSDWKPLPAAAAPSANANDSAAYDDNDQFYASKRPPHVVHSQDDEDPXXXXXXXXXXXXXXXXXSSGGGDHWVGAGGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVDMDYWVGNGESALKVRLDIFHALQRVSKLCKKSHGAFKPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNSAGITTRRCVRGTNCTEGYHRYVRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESLWGPASGGDV 443          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 8.780e-97
Identity = 198/445 (44.49%), Postives = 252/445 (56.63%), Query Frame = 3
Query: 2160 VLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEG--FVLWDVVHVRLAPAHRSFRGTPVP-AGGSDPDAYQD-DFFDAPKLHRRVLGDEDDESSDDDTPD-----------ESGAGVHASSVGGADASGASADNSPQE-----------------------------RNRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQ---VEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYHRYLRTLLAS*CASLALAHSVLLGFSFRWDVKMMVKNRGLPAALGGHYNQYLVELIHRATACWDPSCPVFPEWPAAVDLVDAGERSGLARSLWGGESDGEL 3353
            V KP +++PHKGAP  A+      GV RV++KD +S++G   VLWD+ HVRL    +       P A  +D  AY D D F A K    V+  +DDE                    SG G H    GG                                                  VRLD+FHAL R+S+  KK HGAF+PFMARLRDACF+VN DDI++   VE  L  +GMTPE V + K++NW  F+R+CRRLVP    L ERF+ VI +F   VD  S E +LRP A +AV LLRKHI SGCLSDP  + + Y       G+T  RCVRGTN  EGYHRYLR LL++ CAS +LAHSVLL F++RW+V+M VKNRGLP  +G  ++Q+ +E+I R TA W P  P+FPEW +A+D  D GE+SGL+ SLWG  S G++
Sbjct:    5 VFKPAAYIPHKGAPRAAS------GVGRVTMKDANSDKGDRLVLWDIAHVRLVSDWKPLPAAAAPSANANDSAAYDDNDQFYASKRPPHVVHSQDDEDPXXXXXXXXXXXXXXXXXSSGGGDHWVGAGGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVDMDYWVGNGESALKVRLDIFHALQRVSKLCKKSHGAFRPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYT---KSAGITTRRCVRGTNCTEGYHRYLRRLLSTYCASPSLAHSVLLEFNYRWNVRMAVKNRGLPREVGEFFDQFEIEIIQRETASWYPDSPLFPEWVSALDAADTGEQSGLSESLWGPASGGDV 440          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 3.030e-86
Identity = 298/1035 (28.79%), Postives = 431/1035 (41.64%), Query Frame = 3
Query:  708 KSLIARLADDLLNGKGFSATSKFTREAHMNSFMAK*HSYVSLVNRYRASIGELFRAAAQVGGPDIPMFGDFDDREGFNGACPSDPYLRDVWHTWFYRTPVIQMCRLRQADGIRMTRQDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILNECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAPLEAFAFPEDKKGHVV---WDDKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCR-SLAGMTATALRKSLLKDP-----------------------ARVCCR-HGHFPFFSW-------------QVRLYTNNHASCVALGTVQTKQVARSLLEKWGTD-LTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEGFVLWDVVHVRLAPAHRSF------------------------------------------------------------------RGTPVPAGGSDPDAYQDDFFDAPKLHRRVLGDEDDESSDDDTPDE---------------------SGAGVHASSVGGADASG-----------ASADNSPQERNRGMFS------VRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTK-YRCVRGTNDVEGYHRYLRTLLAS*CASLALAHSVLLGFSFRWDVKMMVKNRGLPAALGGHYNQYLVELIHRATACWDPSCPVFPEWPAAVDLVDAGERSGLARSLW-----GGESDGELD 3356
            + ++A +AD+L++ KGFSA+S+  ++AH+  F +    Y S++         L+R   Q+       FG F+D +G+NG  PS+ YL  VW            C                                        R+  +  ++++K + GV              V QKA+++ASL  LK DLK LFI RY G GFKLP L+ +D CC D+A+   +F E+  A+    +  T S   A   P+     P+   G  V    D   +  AV A+    +    +L +D EWE    G+  +   T+QLA       +FH   G R   +   +  L  LL D  +TK GV ++GD TRL   Y VE    VDLRS A    V+L  R  LA +    L + L KDP                       A  C   HG     S              +VRLYT     CV  G +          E WGT    LV R  TR    +R  V++  V  P +   +  A  P       +   RV        +  +LWD   +R   A  +                                                                   RG P   GG +     D   +A    RR  G    E     TP E                     +G+G  A     A A G            +AD S  E    +F       V+LD FHA+ R+S+ + K HGA + ++ARLRDA F VN +D+  VE  L   GM+ E V+  K ++W  FL+ CRRL+P P EL ERFD V   +GG +D  +++ + R +A++A++ LR HI++ C SD    A+ +  GK+   L   +RC+RGTND+EGYH ++R L+A  C S  LAH +LL +++RW+++  +KNRGL  A+GG Y+Q ++E I R T+        + +W       D GERSG  RS++     GG +D  L+
Sbjct:   33 RDVVAEVADNLMHAKGFSASSEALQQAHLYRFHSMELKYYSML---------LWRREEQLDAGVEDEFGSFEDADGYNGFSPSEHYLSTVW------------CE---------------------------------------RMQQSRAARLDKHVNGV----------QGEVVLQKALQSASLRELKQDLKALFITRYTGGGFKLPRLVSTDECCNDKALLNEIFEEL--ASEGHQFSVTNSVPIASECPVLHLP-PDVVLGEPVKANQDSPCLKAAVDAIRMQAEANNGLLALDIEWEISAAGAPANPPATIQLAAGKRVV-IFHVLHGQRSVPAELPD-PLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVERKVELGLRRGLADLCVHLLGQQLPKDPTVRLSKWNKLDLSDDQKRYAALDAYACLLLHGRIGELSDSIFRDAEELHVGDRVRLYTRAGNDCVGEGCI-----VEHTDETWGTTGFYLVPRRATRRFA-RRWAVRLDRVHVPRAKTLYPDATDPRGTPATAQLASRV--------DSVILWDASRLRKTTAILTVGAAGEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEARTAAXXXXTSSVHVETSTVSCERGGPGGGGGKEGPRLPDSVGEADA--RRGAGQGGTEFV---TPSEPFFCGELDGIEALSSESVACSAGSGGLADEGQAATAGGDDEEEDEVPLDVTADTSSAEVEELLFLKVAGLVVKLDTFHAMQRVSKLILKSHGACRAYLARLRDAFFKVNAEDLAAVEAALRQAGMSKEEVEAKKAKDWVYFLKRCRRLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAW-CISPRLAHLLLLEYNYRWNLRQSMKNRGLDEAVGGFYDQPMLEAIQRMTSKLYGKAK-YSQWLPTSAYGDTGERSGFVRSIFPSNVVGGGTDSVLE 971          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5JYR4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR4_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 2.110e-80
Identity = 235/662 (35.50%), Postives = 303/662 (45.77%), Query Frame = 3
Query: 1092 GMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILNECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAPLEAFAFPEDKKGHVVWD--DKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKD------------------PARV--CCRHGHF-------------PFFS---------WQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPP--PAADE-------QPREGVKRVSVKDMHSEEG--FVLWDVVHVRLAPAHRSFRGTPVPAGGS----DPDAYQDD--FFDAPKLHRRVLGDEDDESSDDDTPDESGAGVH----ASSVGGADASGASADNSPQERN----------------RGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQ---VEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCER 2825
            G V  GDASFKYAKVIRL +  +    +P+  +FTI+NE  Q     +F K M TAS++ LK+DLK LF+ R++GHGFKLPV+  SD CCEDR + ++MF+EIE    V LYDA A  A      L    FP  K+G +V+D     I + V +L++ C+          E    + G                                                  VGV V  D T L RDY V+    VDL  YAR  WV+    SLAGMT++ LRK L K+                  P +V   C   +              P  S          +VRLYTNNHASCV +G +     A   L  WG             G  +R VV V +V KP ++V H GAPP  PA+ +        PR G    +++D+ +  G   V WDV  VRLA     ++  P  AG S       AY DD   +  P     V   E+D   DD   D  G   H      S GG+D  G +   +                     +   +VRLD+FHAL RISR  K  HGAFKPFMARLRDACF+VN DD+++   VE  LE +GMT E + + K++NW  FLR+CRRLVP P  L  R
Sbjct:   10 GHVKTGDASFKYAKVIRLATGEDGTRARPVYEIFTIMNEYNQV----IFSKVMSTASVYDLKNDLKMLFVKRFVGHGFKLPVIFYSDDCCEDRQLLLSMFKEIESEDHVRLYDAAAEGAIE---LLPELMFPPGKRGELVYDLRPSVIAIPVTSLLDECER--------VEXGYIWGG--------------------------------------------------VGVNVNLDATYLARDYRVQVANTVDLGVYARQGWVETPSYSLAGMTSSLLRKELPKNAIIRLSRWSGPSLTDKQVPLQVQYACLDAYASVLLCQEIRKLQDPILSPPPKDLPSGTEVRLYTNNHASCVGVGKMVDDDAAAEALATWGVR---------GKGRGQRAVVSVSEVFKPAAYVAHMGAPPVPPASSDAEGGPATSPRAG--HATMEDVQNGGGAQLVPWDVDDVRLA---NEWKPPPAAAGSSANVNTSAAYNDDNQVYSYPTPPHVVQPTEED--PDDGVED--GCDGHDCGDVGSSGGSDHWGGAGGEAXXXXXXXXXXADVAMDYWGGCQPALNVRLDIFHALQRISRLCKTKHGAFKPFMARLRDACFIVNADDVKEASAVERALEGQGMTSEAIAEYKDKNWTYFLRNCRRLVPEPKRLNTR 588          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5K811_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K811_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 5.600e-79
Identity = 186/500 (37.20%), Postives = 264/500 (52.80%), Query Frame = 3
Query: 1974 PFFSWQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPRE---------------------GVKRVS-----VKDMHSEEGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDPDAYQDDF-FDAPKLHRRVLG----DEDDESSDDDTPDESGAGVHAS-----SVGGADASGASADNSPQERNR-------------GMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYHRYLRTLLAS*CASLALAHSVLLGFSFRWDVKMMVKNRGLPAALGGHYNQYLVELIHRATACWDPSCPVFPEWPAAVDLVDAGERSGLARSL 3326
            P    +VRLY  +H++CVA+G V +   A + L  W +   L G +G R      VVVK+ +   P +F  +  +PP       R                      G K+V      V +    EG VLWD+ H+R A +++      V  GG +   Y D+F  D   + + V G    D  D + DD   DE    + +S     +V  + A+GA++ +S                       VRLD FH + R+++ V KGHGAF    A LRDA F+VN+ DI+  E VL+  G +   +Q +K ++W  FL++ RR VP P+ L  RFD VI       D  + +V+L P AMKAV LLR+HI  GC SDP G+ + +  GK   GLT++RCVRGTN  EGYHRYL+TLLA+ CAS  + H+VL+ F+ RW++   V+NRG+ A +GG  +QY+++ I RATA W P  P+F  W A  D  D+GER+GLA S+
Sbjct:   16 PAIGLKVRLYNASHSACVAVGHVVSDATAEAALRHWQSSARLQGLSGRRQS----VVVKISEAKVPSAFFQYAKSPPSPEGNGSRRCTIGQAAPKIAFPKHGATTGGGGKKVGDESPEVAECGEFEGMVLWDLDHMRDADSYKPPLHRVVDDGGVE---YTDNFSLDNLPMGKVVQGRDVIDSVDVAEDDGVEDEEPLDLDSSVDDVEAVASSTATGAASGDSALPXXXXXXXXXXXXXAAASSLPVRLDPFHGITRVTKWVPKGHGAFFLLCALLRDAIFMVNQADIKAAERVLQNEGKSAADIQNMKAKDWGFFLKNARRRVPAPEVLLARFDAVISACKDIRDAKTGQVLLSPAAMKAVGLLREHIRLGCFSDPVGVPLYFERGKTSTGLTRFRCVRGTNSTEGYHRYLKTLLAAFCASPEVCHTVLMEFNHRWNISRAVENRGMAAEIGGFSHQYMIDHIQRATAEWYPDQPLFSGWVAPADFEDSGERAGLAASV 508          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Q9_ECTSI0.000e+058.353'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JRJ6_9PHAE6.030e-28162.653'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5K4M0_9PHAE1.980e-24551.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIV2_ECTSI9.500e-20244.123'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7FIV1_ECTSI1.350e-17642.13Similar to Werner syndrome protein n=1 Tax=Ectocar... [more]
A0A6H5JPK9_9PHAE2.480e-10345.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLP1_9PHAE8.780e-9744.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JET4_9PHAE3.030e-8628.793'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JYR4_9PHAE2.110e-8035.503'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5K811_9PHAE5.600e-7937.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig171contigP-littoralis_Contig171:4992..11969 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G3Q9
Preferred nameWRN
PFAMsDEAD,DNA_pol_A_exo1,HRDC,HTH_40,Helicase_C,RQC,RecQ_Zn_bind
Model size3916
Max annot lvl2759|Eukaryota
KEGG koko:K10900,ko:K20777
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
Exons12
Evalue2.53e-276
EggNOG OGsKOG4373@1|root,KOG4373@2759|Eukaryota
Ec32 ortholog descriptionRibonuclease H-like domain
Ec32 orthologEc-00_006840.2
EC3.1.11.1,3.6.4.12
Description3'-5' exonuclease activity
Cds size2178
COG categoryC
BRITEko00000,ko01000,ko03032,ko03400
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789827.647627-UTR-P-littoralis_Contig171:4991..58241680789827.647627-UTR-P-littoralis_Contig171:4991..5824Pylaiella littoralis U1_48UTRP-littoralis_Contig171 4992..5824 -
1680789827.7862937-UTR-P-littoralis_Contig171:10577..109001680789827.7862937-UTR-P-littoralis_Contig171:10577..10900Pylaiella littoralis U1_48UTRP-littoralis_Contig171 10578..10900 -
1680789827.7952857-UTR-P-littoralis_Contig171:11219..114311680789827.7952857-UTR-P-littoralis_Contig171:11219..11431Pylaiella littoralis U1_48UTRP-littoralis_Contig171 11220..11431 -
1680789827.8038392-UTR-P-littoralis_Contig171:11599..119691680789827.8038392-UTR-P-littoralis_Contig171:11599..11969Pylaiella littoralis U1_48UTRP-littoralis_Contig171 11600..11969 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789827.6604-CDS-P-littoralis_Contig171:5824..58631680789827.6604-CDS-P-littoralis_Contig171:5824..5863Pylaiella littoralis U1_48CDSP-littoralis_Contig171 5825..5863 -
1680789827.6786554-CDS-P-littoralis_Contig171:6203..65511680789827.6786554-CDS-P-littoralis_Contig171:6203..6551Pylaiella littoralis U1_48CDSP-littoralis_Contig171 6204..6551 -
1680789827.6886163-CDS-P-littoralis_Contig171:6729..68851680789827.6886163-CDS-P-littoralis_Contig171:6729..6885Pylaiella littoralis U1_48CDSP-littoralis_Contig171 6730..6885 -
1680789827.7040257-CDS-P-littoralis_Contig171:7072..71991680789827.7040257-CDS-P-littoralis_Contig171:7072..7199Pylaiella littoralis U1_48CDSP-littoralis_Contig171 7073..7199 -
1680789827.71408-CDS-P-littoralis_Contig171:7352..78191680789827.71408-CDS-P-littoralis_Contig171:7352..7819Pylaiella littoralis U1_48CDSP-littoralis_Contig171 7353..7819 -
1680789827.7250059-CDS-P-littoralis_Contig171:8389..85661680789827.7250059-CDS-P-littoralis_Contig171:8389..8566Pylaiella littoralis U1_48CDSP-littoralis_Contig171 8390..8566 -
1680789827.7346475-CDS-P-littoralis_Contig171:8733..91521680789827.7346475-CDS-P-littoralis_Contig171:8733..9152Pylaiella littoralis U1_48CDSP-littoralis_Contig171 8734..9152 -
1680789827.749089-CDS-P-littoralis_Contig171:9361..94851680789827.749089-CDS-P-littoralis_Contig171:9361..9485Pylaiella littoralis U1_48CDSP-littoralis_Contig171 9362..9485 -
1680789827.7620296-CDS-P-littoralis_Contig171:9817..100151680789827.7620296-CDS-P-littoralis_Contig171:9817..10015Pylaiella littoralis U1_48CDSP-littoralis_Contig171 9818..10015 -
1680789827.773554-CDS-P-littoralis_Contig171:10454..105771680789827.773554-CDS-P-littoralis_Contig171:10454..10577Pylaiella littoralis U1_48CDSP-littoralis_Contig171 10455..10577 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig171.1.3prot_P-littoralis_Contig171.1.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig171 5825..10577 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig171.1.3

>prot_P-littoralis_Contig171.1.3 ID=prot_P-littoralis_Contig171.1.3|Name=mRNA_P-littoralis_Contig171.1.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=726bp
MFGDFDDREGFNGACPSDPYLRDVWHTWFYRTPVIQMCRLRQADGIRMTR
QDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILN
ECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDY
CCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAPLEAFAFPEDKKGH
VVWDDKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLA
LPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRL
QRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDPARVC
CRHGHFPFFSWQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVG
RAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPREGVKRVSVK
DMHSEEGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDPDAYQDDFFDAPKL
HRRVLGDEDDESSDDDTPDESGAGVHASSVGGADASGASADNSPQERNRG
MFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEM
VLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGG
CVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGL
TKYRCVRGTNDVEGYHRYLRTLLAS*
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mRNA from alignment at P-littoralis_Contig171:4992..11969-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig171.1.3 ID=mRNA_P-littoralis_Contig171.1.3|Name=mRNA_P-littoralis_Contig171.1.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=6978bp|location=Sequence derived from alignment at P-littoralis_Contig171:4992..11969- (Pylaiella littoralis U1_48)
CGGAGCAGGGCCGCACGACAGTGGTGCAGGCGGCAGTAGTGGCGGGGGCA GCAGTGGCGGAGGCAGCAGTGCCGGGAGCAGCAGCGCCGGGGGCAGTAGT GGCGGGCACAGCAAGCGGCGCAAAACCAGCAGCGGAAGCAGCGCCCAAGG AAGTGGTGGCGGCTGCAACGGGGGCGGCGGCAACGATCCGGGTTCGGAAG ATGCCTGCTCCGCCTCTCTCAACCGCAGCTAAAGTGGGTCGCAGAGGTTA GAGCAAAGGTGAATGCTGGCGTAGTCCACGACCGCGGGAATGTGGTGGAG AAAAACGGCGGTTTCCCCTTTGATGGAGGATGGGCGATCCCTCCCTTAGC TTCGAGACAAAAGCTTTCAGGTGGGTTCAATTTAATACCGGGTTCACCCA TCCCCATGCTTGCTGCCTGATAGTAGAAGCGGGTACGTCCCAACGCGCTG TTGAAGTTCGCTCGCAGTTGTCATGAGATTTGATAGATCGGCGAGCTCGA CTGACCGTAGATTACCGCCCTGTTGTTGTTGTCAACAGGTTTGCCGGGCG TAGACCCCTTTTTCCTGAAAAAGGTTTTCGTGTGGGTGCCTGCGTTTATT TTTCCAGGCGTCACCGTCCCTTGCCCAACCTGTGGACGCAAAGCAAGCTC AGATGGCTGGAACGCAAAACAATCCCGGCGGGTGTTTCTCGAGGACGGCA TCGGGTACCTCATTGGTTTCAGGTACGAACATAGAATGTTTGCCAGCAGG GTGTTTGCGTTACAAGAGTAAATACATCGGAGCACCACACTCGTGTTGTT AGGCTTGCTCGCGCGCTGCTGCACACACTCCACGTTTCCCATTTCAATTG ATAATAACATCTTCCCTTCGCCGATTTGTGCATCCCTGCGAAACGAGTGA GATTTACCGTTGAAAGCTTGCACGGCATTATCATATGCAAATCCCAACAT TATTGCTCTGTGCGATTTTTCATCTTGCGCGCACGACCCCGTCACGGACA GCTACCTTCCCAATGTGAATCCTCGTTTCAAATTCCGGCAGGTACAACTA CTGCTCTAATTGGAATAAGAGCAAAGGCTTGAAGAAGGGCGACAAAAACC GTCGCAAGGCGTCCTTTAATGCTTGGGACCAGGGGGTTTTGGCCCGCTCA GATGCGTACGTAGCAAACGAGTTTCCGTTCGTGTTGAGTAGGAAAAGAGT CTTATCGCGCGGTTGGCTGATGACTTGCTGAACGGTAAAGGGTTTTCGGC GACTTCGAAGTTCACGCGTGAGGCGCACATGAATTCGTTCATGGCGAAGT AGCACAGCTATGTATCTCTAGTCAACCGCTACCGGGCAAGCATCGGCGAG CTATTCAGGGCTGCTGCGCAGGTGGGGGGTCCTGACATCCCAATGTTTGG TGACTTCGATGACCGTGAAGGCTTCAATGGGGCGTGCCCGTCGGACCCGT ACCTGCGAGATGTTTGGCACACATGGTTCTACCGTACTCCTGTGATACAG ATGTGCCGCTTGAGAGTTGTGTTAATGTTTGACTTCAATACTTGTGCGGC ATTCGGTTTTCGCTGAAACGGTCTCCAAAGAGCACACCACTCCCATATTT CGGTGTTTTGTCTTGCTGCTGTGTACGTTCCGTGTGTACCTCACAGTGCC CGTGCACGTTCTTGTCCCCATGCACCCCTGCAAGTTGATGTGTCGCTGCG ATTTGTTTTTTTTTGCAGCGTGTGTGCGTATGTGTACTTGTTGTTGTTGA TTCTCACATTAGCTCACTACCGCCGCAGTCTAGCCCGTGGTCACAAACCT TGTGACTTGTATGTGTTTTGGTGCCCCCCTCCTATATTTAGGAGTCCATT TCATTCCTGGCGTCTTCGTTCTTTGTCGGTCGGCCATAGCTTGAAGCGCG AAGTACTGTGCAAATTTAAGCTGTGTTGTGCGGCTATGGACCACCCCTCC GAAGCAGGCGGATGGCATTCGTATGACAAGACAAGACTACCTCCAGCGCG TGGGGCAGCTTGTTGACGGAATGGTCCTGGCAGGTGATGCTTCTTTCAAG TACGCCAAGGTCATCCGTTTGACGTCAGCCGGCAACTCCAAAATCAACAA GCCCATCCAAGGCGTCTTCACGATCTTGAACGAGTGCGAGCAGGCGAGTT ATGTTGATATTCCATGGTATGTTTAGGTTAGATTTTCCCTGTACTTTTCT TGAGTACAAGTGTGCGTGCGTAGAGTATGATTGAAGTGCTGCTTCTATGT GTTTCCCTGTGTGTGCATACGTATGTTTTTGGGGAGGACAAACAACGAGC CCATCGGAGGCATCGTCACCATATTGAACGAATTCGAGCAAGCCAGTCAT ATTGAAATTTGAAATTTATATGTTGTGTCCGGGTTAGATCATTCGCTAGC TACTTCTTAGATTGTGCGTTTTTTTTTCGATTACGCTCACTCGCGGTGAT TGGTTGTCCTTCGCGGCACCTCCCGTACTTGCAGGCGGCGGTGTTTCAGA AGGCGATGAAGACTGCGTCCTTACACGGTCTGAAAAGCGATCTGAAAAAC CTGTTCATCAACCGCTACCTTGGCCATGGCTTTAAGTTACCTGTCCTTCT CCTCTCCGGTAGGTGGCTTGCTGTTGGGGGTGCACCTTCCATGGCTTTCA GGATAGTATTTGCTGGTTTTCTGTAGTTATCGCTGGTGCCCGAGGATGAT TTTTTGGTTGGTGTGTAGAACTCGAACTTATGTGTCGTTGTAGCTAGTAC TGGAGTATATTGGTGTAGCTGCTGCAAAAGTTACCTCAATATATCGCGTT GCCGTACCTATATGCAGATTATTGCTGTGAAGATCGTGCGATGTTTGTGG CGATGTTCCGGGAGATCGAACAGGCGACAGGAGTCTGCCTGTACGACGCG ACCGCCTCTGAGGCGGCAGCGGGCGGAGCTCCGCTGGAAGCGTTTGCGTT CCCGGAAGACAAGAAGGGGCATGTAGTTTGGGATGACAAGGCGATTGATC TTGCCGTTGCAGCACTTGTCGAAAGCTGCAAGACGCAGGGGGATGTGCTT GGGATGGACTGCGAGTGGGAACCACCCTTTGACGGCAGCTCGGAGAGTGC CGTTTGCACCCTCCAACTGGCACTCCCGGATGGTACCGCGTATCTGTTCC ACTTTCAACGCGGGGCAAGGCGCACGACATCTTCCACCTCCAACCGCAAC CTGAAGAGGCTACTGAATGACCCAAGCATTACGAAGGTGAGCCTTCAAGA TGCCTTTACGCCTGCACGTTTCCCCCACCCCCCCTTCGTGTGCGTGTGCG TGTGCGTGTGGGTGTGCGTGTGGGTGTGCGTGTGGGCGCGTGTGTTATCG TCGCCCGCCATGCAGTGTTTTTCAACGTCACTTCTCTCGAATTTCGTCAA CAGGTCGGTGTTGCTGTCAGGGGGGATGGGACTCGCCTTCAACGAGACTA CGACGTGGAGACCCGTGGCATGGTGGATCTTAGGAGCTATGCCCGCGCTT GCTGGGTGGACCTTTCCTGTCGGAGTCTCGCCGGTATGACCGCTACCGCC CTGAGGAAGTCTCTCTTGAAGGACCCTGCCGTCCGCTTTTCTCGCTGAAG CAGAGCGAAGCTGACGCGGAACCAGGTACGTGTACGCAGTTGTTTCGTCA GTAATCTCGCGCACGGTCATCAACACGTGCCTTCTATTCCACTTTCTTGT GCTTCTTGTGCGTTTGCTGCAATTTACGCAACCCACAGTACAGTTCGGTG CTGCAGTGGCCACATGAGGCACAGTCCGCCCCCTTCGCTGCTCTTTGACA TTTGGTCGTGCATCTCACAGATCGACTACGCGTGCCTTGATGCTTACGCA GCGGTGCTTCCGTACGCGGAAATCGGAAAGTTTAAATATCCCATCTTCGG CGAGGCGCCAAGCGAAATACTACCTGCGGGAACTGAGGTATCCATGGCCG TAACCATGAGTGTATCTTGCATGTGTTGTATGACGCACAGCTCCCCTGGC CTCTTGTCGATTTTTGCGGATCCGTTTCGGAGCTTCGTCGGGCGCGCCGT ACTTGCTGCTTCGACGTACTATTGTTTTAGGGGTAGAGAAAGTATTGCGT CAAGCGCTGCCGTTGAGTTCCCAGTAGCTCGTTCAGATTCGCGATTGCAG CGAGTGTGTTGCCGACATGGTCATTTTCCCTTTTTTTCCTGGCAGGTGCG GCTGTACACCAACAACCACGCGAGCTGCGTTGCTCTGGGGACAGTTCAGA CCAAACAGGTGGCGCGCTCACTGTTGGAGAAATGGGGCACCGATTTGACG CTGGTGGGGAGGGCAGGAACTCGCAGTGGGGGGTTCAAGCGCGTTGTAGT CAAAGTCGTCGACGTCCTCAAGCCCGTCAGTTTCGTGCCGCACAAGGGTG CACCTCCACCTGCTGCAGATGAGCAGCCACGCGAGGGGGTCAAGCGCGTG TCGGTCAAGGACATGCATTCCGAGGAGGGCTTCGTCCTCTGGGATGTCGT TCATGTTCGTTTAGCGCCCGCTCACCGCTCGTTTCGAGGGACTCCGGTTC CAGCGGGCGGTTCGGACCCGGACGCGTACCAGGACGACTTCTTCGATGCG CCGAAACTGCACAGGCGGTGTACCGGAAAGGTGAGAGTACGGTTAGATCA GACTTGATTGTTTTCTTGCGGCTGTCTTTTTCATGTAGTATGCGAACGAT CCTTCGTCAACGCTTTCCTGACTCGAAACCGTTGGCTTTTATCCCCACCC ACAGATGCGGACGGTGAGAGCGTTCTTGGAGACGAAGATGATGAGAGCAG CGACGACGACACCCCGGACGAGAGTGGGGCAGGCGTTCATGCATCAAGCG TCGGAGGAGCCGATGCTAGCGGGGCGAGTGCTGACAATTCACCACAGGTG ATTTAAGCGGGTTGTCCGTTGGCAAAAATGTACCGGAAAGTGGTATCATG CTCCTGTAGAATTTCGAGTATCCCCGAGGTAGCCAAGTTTGGTCTCCTTG GTGGGCATTCTCGTATCGTCGTGGTGTCCTCATGGGTGATCTGACCACAT TCTGTGACATCGTGTCGTTTTATGCTCCACGCAGGAACGAAATCGCGGCA TGTTTTCCGTCCGACTCGATCTGTTCCATGCGCTTAACCGCATATCGCGC ACGGTAAAGAAAGGCCACGGCGCCTTCAAGCCATTCATGGCGCGGTTGCG TGACGCCTGCTTCCTTGTTAACCGAGACGATATCCAACAAGTAAGTACCT TGGGGTTGGAAAGGAAGAGCTCAACGTGAGTGTCCGCCGTTCATCACGAA GTGTAAGAGGACATGTCTTCTTTCATCTCAGGGAAACCGTTTGCTTTAAT CCCCACTGATCCGGCTGTCCGATCGTTGAATACCTTCTTGGCTCGCACGC TGTCGCCCCTCGGTTCAGGTGGAGATGGTGCTGGAAGCTCGCGGAATGAC GCCGGAACATGTGCAGCAGGTGAAGGAACGAAACTGGGCGCTTTTCCTCA GGAGCTGCCGGCGTCTTGTCCCTCCACCGGACGAGCTGTGCGAGCGCTTC GACAGGGTCATCGAGGAGTTTGGCGGTTGTGTTGACAATGACTCCAGGGA AGTTATTCTCCGCCCGAAAGCGATGAAAGCTGTGCGCCTCCTGCGGAAGC ACATCGTGAGCGGTTGCTTGAGCGATCCTAACGGAATGGCGATGTCCTAC GCCATTGGCAAGAACAAGGGTGGCCTCACCAAGTATCGTTGCGTCCGAGG CACCAACGATGTGGAGGTGAGCAACTGTTTCAAAGAATATTGCGTAGCGT GTCTCCGTGTCATAAGCCTCGAAATAAGCTTTCCGAAAGTATGTATTCTT GCCTCGGGGCTGGGTGGTTGGGGAGAAGGACGAGGGTGGAGGGTCTTCCA GGATGTTTCTTGCGTACTTGTTTCTTGGTTGGGTCTATCCGTTATTCTTA GACCACCAGCATGATCACCGTCCGATCTGAGACATCATTACACGTGCTGC GCGTGTACGCAATATCTTTTTCCAAATCAGGACTCGATAATTGTAGGATA TGTACTCAAAAGGCTTCCACCCTTGTTGCGCCGCGACTGTTGACATGGTA CAACAGGGTTACCATCGGTACCTGCGCACCCTGCTGGCATCCTAGTGTGC GTCGCTGGCACTAGCGCACTCGGTGTTGCTGGGGTTCAGCTTCCGGTGGG ACGTCAAGATGATGGTCAAGAACCGTGGCTTGCCCGCGGCGCTGGGAGGG CACTACAACCAGTATCTTGTCGAGCTGATTCATCGGGCCACGGCGTGCTG GGACCCAAGTTGCCCCGTCTTCCCGGAGTGGCCAGCGGCTGTCGACTTAG TCGACGCGGGCGAGAGGAGTGGCCTCGCCCGGAGCTTGTGGGGGGGGGAG AGCGACGGCGAGCTCGACGGGGGGGGCATGGGGTTTACCCGACGTTGAGG CGTTGCGTGCTGATGTGGGCGAGAATAGTGATGTCAACGGTCGAACGCCG CTGTCGCACCTCACGCTGTCCTCCAAGCTGTACGCGAAAATGATGGGCAA GAACATGCCAGAAACTCGGGTACATACCCGGGAGGAGAAGCGCAAGTTTC GAGATGAGCTGGCAAATAACTACTGGCAGCAGGGCAACAACAGGGGTAGG CTCCAGCAGTACCAACGTGTCAATTTTGATGCGTGGGCAGGCAAGTGGAA TACCTACTGCGACCAGATCCAAAAGGGTGCTGACAAGTGGGTTCCAGTTG AACGCAAGACAGCAAAGCAGCTGGAAGAGTACCACGCGGAGCACCAGCGA CAGGCGAACGTCGCGTTGACGATGTACCCAATGAGGAACGCCGCAGACGC TCTGCGTTCCAGTCTTCAAGAGCCGATGCATGGGGCCGCGTTCGAGGGCT CTGTTGGACAGATCCAGCCTGTTCCTCTATCATTTCGAGCGGCGCAACCT GCTGGAGGGTTGGCATTGCGAGGAGGGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig171:4992..11969-

>mRNA_P-littoralis_Contig171.1.3 ID=mRNA_P-littoralis_Contig171.1.3|Name=mRNA_P-littoralis_Contig171.1.3|organism=Pylaiella littoralis U1_48|type=CDS|length=2178bp|location=Sequence derived from alignment at P-littoralis_Contig171:4992..11969- (Pylaiella littoralis U1_48)
ATGTTTGGTGACTTCGATGACCGTGAAGGCTTCAATGGGGCGTGCCCGTC
GGACCCGTACCTGCGAGATGTTTGGCACACATGGTTCTACCGTACTCCTG
TGATACAGATGTGCCGCTTGAGACAGGCGGATGGCATTCGTATGACAAGA
CAAGACTACCTCCAGCGCGTGGGGCAGCTTGTTGACGGAATGGTCCTGGC
AGGTGATGCTTCTTTCAAGTACGCCAAGGTCATCCGTTTGACGTCAGCCG
GCAACTCCAAAATCAACAAGCCCATCCAAGGCGTCTTCACGATCTTGAAC
GAGTGCGAGCAGGCGAGTTATGCGGCGGTGTTTCAGAAGGCGATGAAGAC
TGCGTCCTTACACGGTCTGAAAAGCGATCTGAAAAACCTGTTCATCAACC
GCTACCTTGGCCATGGCTTTAAGTTACCTGTCCTTCTCCTCTCCGATTAT
TGCTGTGAAGATCGTGCGATGTTTGTGGCGATGTTCCGGGAGATCGAACA
GGCGACAGGAGTCTGCCTGTACGACGCGACCGCCTCTGAGGCGGCAGCGG
GCGGAGCTCCGCTGGAAGCGTTTGCGTTCCCGGAAGACAAGAAGGGGCAT
GTAGTTTGGGATGACAAGGCGATTGATCTTGCCGTTGCAGCACTTGTCGA
AAGCTGCAAGACGCAGGGGGATGTGCTTGGGATGGACTGCGAGTGGGAAC
CACCCTTTGACGGCAGCTCGGAGAGTGCCGTTTGCACCCTCCAACTGGCA
CTCCCGGATGGTACCGCGTATCTGTTCCACTTTCAACGCGGGGCAAGGCG
CACGACATCTTCCACCTCCAACCGCAACCTGAAGAGGCTACTGAATGACC
CAAGCATTACGAAGGTCGGTGTTGCTGTCAGGGGGGATGGGACTCGCCTT
CAACGAGACTACGACGTGGAGACCCGTGGCATGGTGGATCTTAGGAGCTA
TGCCCGCGCTTGCTGGGTGGACCTTTCCTGTCGGAGTCTCGCCGGTATGA
CCGCTACCGCCCTGAGGAAGTCTCTCTTGAAGGACCCTGCCCGAGTGTGT
TGCCGACATGGTCATTTTCCCTTTTTTTCCTGGCAGGTGCGGCTGTACAC
CAACAACCACGCGAGCTGCGTTGCTCTGGGGACAGTTCAGACCAAACAGG
TGGCGCGCTCACTGTTGGAGAAATGGGGCACCGATTTGACGCTGGTGGGG
AGGGCAGGAACTCGCAGTGGGGGGTTCAAGCGCGTTGTAGTCAAAGTCGT
CGACGTCCTCAAGCCCGTCAGTTTCGTGCCGCACAAGGGTGCACCTCCAC
CTGCTGCAGATGAGCAGCCACGCGAGGGGGTCAAGCGCGTGTCGGTCAAG
GACATGCATTCCGAGGAGGGCTTCGTCCTCTGGGATGTCGTTCATGTTCG
TTTAGCGCCCGCTCACCGCTCGTTTCGAGGGACTCCGGTTCCAGCGGGCG
GTTCGGACCCGGACGCGTACCAGGACGACTTCTTCGATGCGCCGAAACTG
CACAGGCGCGTTCTTGGAGACGAAGATGATGAGAGCAGCGACGACGACAC
CCCGGACGAGAGTGGGGCAGGCGTTCATGCATCAAGCGTCGGAGGAGCCG
ATGCTAGCGGGGCGAGTGCTGACAATTCACCACAGGAACGAAATCGCGGC
ATGTTTTCCGTCCGACTCGATCTGTTCCATGCGCTTAACCGCATATCGCG
CACGGTAAAGAAAGGCCACGGCGCCTTCAAGCCATTCATGGCGCGGTTGC
GTGACGCCTGCTTCCTTGTTAACCGAGACGATATCCAACAAGTGGAGATG
GTGCTGGAAGCTCGCGGAATGACGCCGGAACATGTGCAGCAGGTGAAGGA
ACGAAACTGGGCGCTTTTCCTCAGGAGCTGCCGGCGTCTTGTCCCTCCAC
CGGACGAGCTGTGCGAGCGCTTCGACAGGGTCATCGAGGAGTTTGGCGGT
TGTGTTGACAATGACTCCAGGGAAGTTATTCTCCGCCCGAAAGCGATGAA
AGCTGTGCGCCTCCTGCGGAAGCACATCGTGAGCGGTTGCTTGAGCGATC
CTAACGGAATGGCGATGTCCTACGCCATTGGCAAGAACAAGGGTGGCCTC
ACCAAGTATCGTTGCGTCCGAGGCACCAACGATGTGGAGGGTTACCATCG
GTACCTGCGCACCCTGCTGGCATCCTAG
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