prot_P-littoralis_Contig171.1.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig171.1.3
Unique Nameprot_P-littoralis_Contig171.1.3
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length726
Homology
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI)

HSP 1 Score: 787 bits (2033), Expect = 1.540e-275
Identity = 446/760 (58.68%), Postives = 500/760 (65.79%), Query Frame = 0
Query:    2 FGDFDDREGFNGACPSDPYLRDVWHTWFYRTPVIQMCRLRQADGIRMTRQDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILNECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAPLEAFAFPEDKKGHVVWDDKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDPA----------------RVCCRHG------HFPFFSWQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDPDAYQDDFFDAPKLHRRVL---GD-----EDDESSDDDTPDESGAGVHASSV----GGADASGASADNS--PQERNRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYHRYLRTLLAS 725
            FG F D+EGFNGA PSD YLR VWH WFY T VI+      ADG+RMTR+DYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAG S  +KPIQG+FTILNE EQA                                                                            A GGA L A  FPE K G  V+D  AID+AVA LV  C TQG VLGMDCEWEP F+GSSE  VCTLQLALPDGT+ LFH QRG R  T ST N NLKRLL D +ITKVGVAV+GDG RLQRDYDVETRGMVDLRSYARACWVDL CRSLAGMTATAL K L KD A                   C         H     ++  ++    +   A GT +T++ A SLLEKWGT LTL GR GTRSGG +RVVVKV + LKP SFVPH  APPPA D     G +RV+VKD+    GFVLWD+VHVRLA AHRSF GTP+P G +D DA+QDDFFDAP+  + V    GD     E D  SDDDT  ESGAG   +S     GG  AS    D +   QE    MF VRLDLFHALNR+SRT+KKGHGAF+P MARLRDACFLVNRDD+ Q+E VLE RGM+P  VQQ K+++W+ FLR CRRLVPPP EL +RFD+V++EFG CVDN S+EV+LRPK+MKAV LLRKHIV+GCLSDP+G+AM YA+GK   GL  YRCVRGTNDVEGYHRYLRTLLAS
Sbjct:   45 FGGFGDKEGFNGAWPSDQYLRAVWHKWFYDTVVIE------ADGVRMTREDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGESTKSKPIQGIFTILNEYEQA----------------------------------------------------------------------------AEGGAELAALTFPEGKTGVRVFDKTAIDIAVANLVGGCATQGMVLGMDCEWEPAFNGSSERPVCTLQLALPDGTSSLFHLQRGGRGITPSTFNTNLKRLLGDLAITKVGVAVKGDGKRLQRDYDVETRGMVDLRSYARACWVDLPCRSLAGMTATALGKYLSKDAAGRFSHWSRPELTPNQIEYACLDAYAAVLLHAEIGKFKDPIFGEAPSEVPAAGT-KTEEEATSLLEKWGTVLTLGGRVGTRSGGLQRVVVKVDNALKPSSFVPHDKAPPPAQD-----GQRRVTVKDVVDGAGFVLWDIVHVRLASAHRSFEGTPLPGGAADADAHQDDFFDAPRPAQAVYQNGGDVESDLEADSESDDDTFGESGAGADLASSEASSGGPSASXXXXDAAVASQEEAGDMFFVRLDLFHALNRLSRTIKKGHGAFRPIMARLRDACFLVNRDDVLQIEKVLERRGMSPAQVQQAKDQDWSYFLRKCRRLVPPPSELLKRFDKVVQEFGNCVDNISKEVLLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKTTDGLVNYRCVRGTNDVEGYHRYLRTLLAS 716          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE)

HSP 1 Score: 692 bits (1787), Expect = 1.760e-234
Identity = 390/638 (61.13%), Postives = 432/638 (67.71%), Query Frame = 0
Query:  175 DATASEAAAGGAPLEAFAFPEDKKGHVVWDDKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDPAR---------------------------------------VCCRHGHFPFFSWQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADE--QPREGVKRVSVKDMHSE---EGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDPDAYQDDFFDAPKLHRRV----------LGDEDDESSDDDTPDESGAGVHASSV--------GGADASGASADN------------SPQERNRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQ-------------VEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYHRYLRTLLAS 725
            DA ++E  AGGA LE F+FPE K+G+VVWD+KAI+LAV   VE CK QG VLGMDCEWEPPFDGSSE AVCTLQLALPDGTAYLFH QRG RRT  ST NR+LK LLNDP+ITKVGVAV+GDG+RLQRDY VET GMVDLRSYAR CWVDL CRSLAGM ATAL KSL K+P+                                         C      P    +VRLYTNNH SCV +G VQ ++ ARSL+EKWGTDL L  R GTRSGG KRVVVKVVDVLKP S  PH+ APP       QPR  V   S+ D+HS    EGFVLWD+VHVRLA  H  F+G PVPA  +DPDA+ D+FFD P+  + V          LG E D SSDDDT DES AGV A           G A A+                  +P+E + G+FSVRLD FH LNRISR  KK HGAFKPFMARLRDACFLVNRDD+ Q             VEM LEARGM PE VQQ+ E+NW+ FLRS RRLVP  D L +RFDRVIEEFGGCVDN S EV+LRPKAMKAVR LRKHI + CLSDP+GMAM +AIGKNK GLT YRCVRGTNDVEGYHRYLRTLLAS
Sbjct:   39 DAASTEETAGGAVLETFSFPEGKEGYVVWDEKAINLAVMEFVEGCKQQGHVLGMDCEWEPPFDGSSEGAVCTLQLALPDGTAYLFHLQRGTRRTRPSTFNRSLKVLLNDPTITKVGVAVKGDGSRLQRDYGVETCGMVDLRSYARTCWVDLPCRSLAGMVATALGKSLSKNPSVRFSRWSQAELTQNQVNYACLDAYAAVVLHAEIGKSKDPIFCMAPSDIPIAGTEVRLYTNNHESCVGVGQVQDEEAARSLVEKWGTDLKLAQREGTRSGGLKRVVVKVVDVLKPASLTPHQDAPPXXXXXXGQPRVAV---SMNDVHSGKGFEGFVLWDLVHVRLASDHHPFQGIPVPAASADPDAHVDNFFDEPRPAQAVYQNDGDVESALGGEPDGSSDDDTLDESAAGVGAXXXXXXXXXXKGAASAAXXXXXXXXXXXXXXXXXXAPEEPH-GVFSVRLDPFHTLNRISRMTKKSHGAFKPFMARLRDACFLVNRDDVYQASLKPFGWIWERSVEMTLEARGMKPEEVQQLTEQNWSFFLRSSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNKHGLTDYRCVRGTNDVEGYHRYLRTLLAS 672          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: D7FIV2_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 593 bits (1529), Expect = 1.200e-197
Identity = 343/767 (44.72%), Postives = 444/767 (57.89%), Query Frame = 0
Query:    2 FGDFDDREGFNGACPSDPYLRDVWHTWFYRTPVIQMCRLRQADGIRMTRQDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILNECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAP----LEAFAFPEDKKGHVVWDDKAIDLA--VAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDPARVCCRHGHFPFFSWQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDP-DAYQDD--FFDAPKLHRRVLGDEDDESSDDDTPDESG-----------------AGVHASSVGGADASGASADNSPQER-----------------------------NRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVE 713
            F    D  GF+ + PS  YL D+WH  FY TPV+Q      ADG   TR++YLQR  QLVDG  LAGDASFKYAKVIRL++  +    +P+ G+FTI+NE +Q     VF KAM TAS+H LK+DLK +F+ R+LGHGFKLPV+  SD CC+DR + + MF+EIE  TG  LYD   +E A GG+P    L A  FP  K+G  V+D +   +A  V AL++ C+ QG+VLG+DCEWEP   G++ + V T+QL+LPDGTAY F  QRG ++TTSS   + L+ LL +PSI KVGV +  D T L+RDY +E    VDLR+YAR CWV+   RSLAGM ++ L + L KDP     R    P    QVRLY+NNHASCV +G VQ    A   L  W            R G   +VVV +  V KP ++  HKGAP  A+      GV RV++ + +  +  VLWDV HVRL    +       P+   +  +AY D+  FF +P+    V   +D++  D D  +  G                 AGV A   GG   +G                                        +    VRLD+FHAL RISR  KK HGAFKPFMARL+DACF+VN+DDI++VE  L ++GMTPE V + K+++W  FLR+CRRLVP    L ERF+ VI +F   VD  S EV++ PK M+AV  LRKHI S  LSDP+G+ + Y  G+N  G+T  RCVRGTN  E
Sbjct:  205 FSSIGDPSGFHSSPPSAHYLGDIWHKGFYETPVVQ------ADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQV----VFSKAMTTASVHDLKNDLKMMFVKRFLGHGFKLPVIFYSDECCDDRQLLLTMFKEIELETGARLYDT--AEEAGGGSPGVEVLPALEFPPGKRGECVFDFRPNSIAPSVVALIDGCQLQGNVLGLDCEWEPSLGGTTPNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYLERDYGIEVANTVDLRTYARQCWVETPSRSLAGMASSLLGRQLPKDPVIRLSRWSS-PLSDDQVRLYSNNHASCVGVGEVQDDDTAAEALAGWFPG-------ARRKGRLTQVVVGLSGVFKPAAYTAHKGAPRAAS------GVGRVTMDEAYKGDRLVLWDVAHVRLVSDWKPSPAAAAPSSNENASEAYNDNAQFFTSPRPPHVVRLQDDEDPDDGDEEEYDGHDCGDLGSSARGDHGLWAGVEAGGGGGGAVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXGGDVDMDDWLGDEQCALQVRLDIFHALQRISRLCKKSHGAFKPFMARLKDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKSWTYFLRNCRRLVPERQRLLERFNSVINQFCNVVDAKSGEVLILPKVMQAVDQLRKHIESDRLSDPHGVPLYYTTGQNAAGITTRRCVRGTNCTE 945          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5K4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4M0_9PHAE)

HSP 1 Score: 582 bits (1499), Expect = 8.670e-187
Identity = 352/716 (49.16%), Postives = 412/716 (57.54%), Query Frame = 0
Query:    1 MFGDFDDREGFNGACPSDPYLRDVWHTWFYRTPVIQMCRLRQADGIRMTRQDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILNECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAPLEAFAFPEDKKGHVVWDDKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDPARVCCRHGHFPFFSWQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDPDAYQDDFFDAPKLHRRVLGDEDDESSDDDTPDESGAGVHASSVGGADASGASADNSPQERNRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYH 716
            +FG F DREGFNGA PSD YLR VWH WFY T VI++ R    D  +                    G  S   ++V                                VFQKAMKT+S+H LKSDLKNLF+NRY+GHGFKL V+L S           AMFREIE+ T V L+DAT ++AA GGA L A  FPE K G  V+D  AID+AVA L+  C TQG VLGMDCEWEP  +GSSE  VCTLQLALPDG ++LFH QRG R T  +T N +LKRLLNDP+ITK+  A                     L +YA            A +  T +     KDP          P    +VRLYTNNHASCVA+G VQT+  A SLLEKWGT LTL GR GTRSGG +RVVVKV + LKP SFVPH  APPPA     + G  RVS+KD+ + +GFVLWD+VHVRLA AHRSF GTP+P G +D DAYQ DFFDAP+  + V  +            E  A  HA+S GG  ASGA AD +                                                     QVE VLE RGMTP   +QVK+ NW+ FL+ CRRLVPPP EL + FD+V+EEFG CVDN S+E +LRPK+MKAVRLLRKHIV+GCLSDP+G+AM YAIGK   GL +YRCVRGTNDVEGYH
Sbjct:  394 IFGGFGDREGFNGAWPSDQYLRAVWHKWFYETVVIEVRRFLMLDFSQ--------------------GACSLLVSQV--------------------------------VFQKAMKTSSVHDLKSDLKNLFVNRYIGHGFKLLVILFS-----------AMFREIEEETRVLLFDATGAKAAEGGAELAALTFPEGKTGVRVFDKTAIDIAVATLIGGCSTQGMVLGMDCEWEPALNGSSERPVCTLQLALPDGISFLFHLQRGVRGTKPATFNTSLKRLLNDPAITKIEYAC--------------------LDAYA------------AVLLHTEIGN--FKDPI-FSEAPSEVPAAGTKVRLYTNNHASCVAVGHVQTEDEASSLLEKWGTVLTLGGRVGTRSGGLRRVVVKVNNALKPFSFVPHDTAPPPA-----QHGQGRVSIKDVVAGDGFVLWDLVHVRLASAHRSFEGTPLPGGAADADAYQHDFFDAPRPAQAVYHNVRSMQVLIWRAVEQ-AVEHAASSGGPSASGADADAAVAS--------------------------------------------------QVEKVLECRGMTPAQAEQVKDHNWSFFLKRCRRLVPPPSELLKPFDKVVEEFGNCVDNVSKEALLRPKSMKAVRLLRKHIVAGCLSDPDGVAMYYAIGKTTDGLVRYRCVRGTNDVEGYH 955          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: D7FIV1_ECTSI (Similar to Werner syndrome protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV1_ECTSI)

HSP 1 Score: 483 bits (1244), Expect = 6.480e-158
Identity = 291/680 (42.79%), Postives = 378/680 (55.59%), Query Frame = 0
Query:  115 MKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAP----LEAFAFPEDKKGHVVWDDKAIDLA--VAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDPARVCCRHG------------HFPFFS---------WQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDP-DAYQDD--FFDAPKLHRRVLGDEDDESSDDDTPDESG-----------------AGVHASSVGGADASGASADNSPQER-----------------------------NRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYHRY 718
            M TAS+H LK+DLK +F+ R+LGHGFKLPV+  SD CC+DR + + MF+EIE  TG  LYD   +E A GG+P    L A  FP  K+G  V+D +   +A  V AL + C+ QG+VLG+DCEWEP   G++ + V T+QL+LPDGTAY F  QRG ++TTSS   + L+ LL +PSI KVGV +  D T L+RDY +E    VDLR+YAR CWV+   RSLAGM ++ L + L KDP     R                P FS          +VRLY+NNHASCV +G VQ    A   L  W            R G   +VVV +  V KP ++  HKG P  A+      GV RV++ + +  +  VLWDV HVRL    +       P+   +  +AY D+  FF +P+    V   +D++  D D  +  G                 AGV A   GG   +G                                        +    VRLD+FHAL RISR  KK HGAFKPFMARLRDACF+VN+DDI++VE  L ++GMTPE V + K++NW  FLR+CRRLVP    L ERF+ VI +F   VD  S EV++RPKAM+AV  LRKHI S CLSDP+G+ + Y  G+N  G+T  RCVRGTN  E  +R+
Sbjct:    1 MTTASVHDLKNDLKMMFVKRFLGHGFKLPVIF-SDECCDDRQLLLTMFKEIELETGARLYDT--AEEAGGGSPGVEVLPALEFPPGKRGECVFDFRPNSIAPSVVALTDGCQLQGNVLGLDCEWEPSLAGTTPNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVGVNINSDATYLERDYGIEVANTVDLRTYARQCWVETPSRSLAGMASSLLGRQLPKDPVIRSSRWSSPLSDNQEVAKFQDPIFSPPPVELHPGTKVRLYSNNHASCVGVGEVQDDDTAAEALAGWFPG-------ARRKGRLTQVVVGLSGVFKPAAYTAHKGTPSAAS------GVGRVTMDEAYKGDRLVLWDVAHVRLVSDWKPSPAAAAPSSNENASEAYNDNAQFFTSPRPPHVVRLQDDEDPDDGDEEEYDGHDCGDLGSSARGDHGFWAGVEAGGGGGGAVNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVDMDDWLGDEQCALQVRLDIFHALQRISRLCKKSHGAFKPFMARLRDACFIVNQDDIKEVEQALGSKGMTPEAVAEYKDKNWTYFLRNCRRLVPERQRLLERFNSVINQFCNVVDAKSGEVLIRPKAMQAVDQLRKHIESDCLSDPHGVPLYYTTGQNAAGITTRRCVRGTNYTEFNYRW 664          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5JYR4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYR4_9PHAE)

HSP 1 Score: 286 bits (733), Expect = 6.390e-84
Identity = 235/662 (35.50%), Postives = 303/662 (45.77%), Query Frame = 0
Query:   63 GMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILNECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAPLEAFAFPEDKKGHVVWD--DKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKD------------------PARV--CCRHGHF-------------PFFS---------WQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPP--PAADE-------QPREGVKRVSVKDMHSEEG--FVLWDVVHVRLAPAHRSFRGTPVPAGGS----DPDAYQDD--FFDAPKLHRRVLGDEDDESSDDDTPDESGAGVH----ASSVGGADASGASADNSPQERN----------------RGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQ---VEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCER 640
            G V  GDASFKYAKVIRL +  +    +P+  +FTI+NE  Q     +F K M TAS++ LK+DLK LF+ R++GHGFKLPV+  SD CCEDR + ++MF+EIE    V LYDA A  A      L    FP  K+G +V+D     I + V +L++ C+          E    + G                                                  VGV V  D T L RDY V+    VDL  YAR  WV+    SLAGMT++ LRK L K+                  P +V   C   +              P  S          +VRLYTNNHASCV +G +     A   L  WG             G  +R VV V +V KP ++V H GAPP  PA+ +        PR G    +++D+ +  G   V WDV  VRLA     ++  P  AG S       AY DD   +  P     V   E+D   DD   D  G   H      S GG+D  G +   +                     +   +VRLD+FHAL RISR  K  HGAFKPFMARLRDACF+VN DD+++   VE  LE +GMT E + + K++NW  FLR+CRRLVP P  L  R
Sbjct:   10 GHVKTGDASFKYAKVIRLATGEDGTRARPVYEIFTIMNEYNQV----IFSKVMSTASVYDLKNDLKMLFVKRFVGHGFKLPVIFYSDDCCEDRQLLLSMFKEIESEDHVRLYDAAAEGAIE---LLPELMFPPGKRGELVYDLRPSVIAIPVTSLLDECER--------VEXGYIWGG--------------------------------------------------VGVNVNLDATYLARDYRVQVANTVDLGVYARQGWVETPSYSLAGMTSSLLRKELPKNAIIRLSRWSGPSLTDKQVPLQVQYACLDAYASVLLCQEIRKLQDPILSPPPKDLPSGTEVRLYTNNHASCVGVGKMVDDDAAAEALATWGVR---------GKGRGQRAVVSVSEVFKPAAYVAHMGAPPVPPASSDAEGGPATSPRAG--HATMEDVQNGGGAQLVPWDVDDVRLA---NEWKPPPAAAGSSANVNTSAAYNDDNQVYSYPTPPHVVQPTEED--PDDGVED--GCDGHDCGDVGSSGGSDHWGGAGGEAXXXXXXXXXXADVAMDYWGGCQPALNVRLDIFHALQRISRLCKTKHGAFKPFMARLRDACFIVNADDVKEASAVERALEGQGMTSEAIAEYKDKNWTYFLRNCRRLVPEPKRLNTR 588          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5JCK3_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 1.850e-76
Identity = 149/342 (43.57%), Postives = 192/342 (56.14%), Query Frame = 0
Query:    7 DREGFNGACPSDPYLRDVWHTWFYRTPVIQMCRLRQADGIRMTRQDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILNECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAPLEAFAFPEDKKGHVVWDDKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTS-STSNRNLKRLL-NDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDP 346
            D  G N   PS  YL D+WH WFY  P+++      A G      +YLQR  QLVDG +LAGDASFKYAKVIRL +  +    +P+ G+FTI+NE +Q     VF KAMKTAS+H LKSDLK +F+ R++GHGFKLPV+L +                                                           +DLAVA L + C+ QGDVLG+DCEWEP   G++ + V TLQL+LPDGTAY FH  R   R T+ ST  + L+ LL N PS   VGV V  D + L+R Y V+   M+D+R++AR CWV+ S RSLAGM ++ + K+L KDP
Sbjct:    3 DPLGLNRRHPSAHYLGDIWHKWFYEMPMVKTWVTTDALG----HVNYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGPDGTRARPVYGIFTIMNEYDQV----VFSKAMKTASVHDLKSDLKMMFVQRFVGHGFKLPVILFT-----------------------------------------------------------VDLAVAELAKGCQDQGDVLGLDCEWEPALGGATPNPVSTLQLSLPDGTAYCFHLHRRTNRATATSTIPKVLQSLLENVPSQRYVGVNVNSDASLLERYYGVKVANMIDVRTHARECWVETSSRSLAGMASSLVGKALPKDP 277          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 8.940e-67
Identity = 151/354 (42.66%), Postives = 187/354 (52.82%), Query Frame = 0
Query:  419 VLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEG--FVLWDVVHVRLAPAHRSFRGTPVP-AGGSDPDAYQD-DFFDAPKLHRRVLGDEDDESSDDDTPD-----------ESGAGVHASSVGGADASGASADNSPQE-----------------------------RNRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQ---VEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYHRYLRTLLAS 725
            V KP +++PHKGAP  A+      GV RV++KD +S++G   VLWD+ HVRL    +       P A  +D  AY D D F A K    V+  +DDE                    SG G H    GG                                                  VRLD+FHAL R+S+  KK HGAFKPFMARLRDACF+VN DDI++   VE  L  +GMTPE V + K++NW  F+R+CRRLVP    L ERF+ VI +F   VD  S E +LRP A +AV LLRKHI SGCLSDP  + + Y  GKN  G+T  RCVRGTN  EGYHRY+R LL++
Sbjct:    5 VFKPAAYIPHKGAPRAAS------GVGRVTMKDANSDKGDRLVLWDIAHVRLVSDWKPLPAAAAPSANANDSAAYDDNDQFYASKRPPHVVHSQDDEDPXXXXXXXXXXXXXXXXXSSGGGDHWVGAGGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVDMDYWVGNGESALKVRLDIFHALQRVSKLCKKSHGAFKPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNSAGITTRRCVRGTNCTEGYHRYVRRLLST 352          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 7.640e-63
Identity = 244/870 (28.05%), Postives = 341/870 (39.20%), Query Frame = 0
Query:    2 FGDFDDREGFNGACPSDPYLRDVWHTWFYRTPVIQMCRLRQADGIRMTRQDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILNECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDYCCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAPLEAFAFPEDKKGHVV---WDDKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLALPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRLQRDYDVETRGMVDLRSYARACWVDLSCR-SLAGMTATALRKSLLKDP-----------------------ARVCCR-HGHFPFFSW-------------QVRLYTNNHASCVALGTVQTKQVARSLLEKWGTD-LTLVGRAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEGFVLWDVVHVRLAPAHRSF------------------------------------------------------------------RGTPVPAGGSDPDAYQDDFFDAPKLHRRVLGDEDDESSDDDTPDE---------------------SGAGVHASSVGGADASG-----------ASADNSPQERNRGMFS------VRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTK-YRCVRGTNDVEGYHRYLRTLLA 724
            FG F+D +G+NG  PS+ YL  VW            C                                        R+  +  ++++K + GV              V QKA+++ASL  LK DLK LFI RY G GFKLP L+ +D CC D+A+   +F E+  A+    +  T S   A   P+     P+   G  V    D   +  AV A+    +    +L +D EWE    G+  +   T+QLA       +FH   G R   +   +  L  LL D  +TK GV ++GD TRL   Y VE    VDLRS A    V+L  R  LA +    L + L KDP                       A  C   HG     S              +VRLYT     CV  G +          E WGT    LV R  TR    +R  V++  V  P +   +  A  P       +   RV        +  +LWD   +R   A  +                                                                   RG P   GG +     D   +A    RR  G    E     TP E                     +G+G  A     A A G            +AD S  E    +F       V+LD FHA+ R+S+ + K HGA + ++ARLRDA F VN +D+  VE  L   GM+ E V+  K ++W  FL+ CRRL+P P EL ERFD V   +GG +D  +++ + R +A++A++ LR HI++ C SD    A+ +  GK+   L   +RC+RGTND+EGYH ++R L+A
Sbjct:   91 FGSFEDADGYNGFSPSEHYLSTVW------------CE---------------------------------------RMQQSRAARLDKHVNGV----------QGEVVLQKALQSASLRELKQDLKALFITRYTGGGFKLPRLVSTDECCNDKALLNEIFEEL--ASEGHQFSVTNSVPIASECPVLHLP-PDVVLGEPVKANQDSPCLKAAVDAIRMQAEANNGLLALDIEWEISAAGAPANPPATIQLAAGKRVV-IFHVLHGQRSVPAELPD-PLVDLLEDTKLTKTGVGIKGDCTRLTSFYGVEVAHAVDLRSLAVERKVELGLRRGLADLCVHLLGQQLPKDPTVRLSKWNKLDLSDDQKRYAALDAYACLLLHGRIGELSDSIFRDAEELHVGDRVRLYTRAGNDCVGEGCI-----VEHTDETWGTTGFYLVPRRATRRFA-RRWAVRLDRVHVPRAKTLYPDATDPRGTPATAQLASRV--------DSVILWDASRLRKTTAILTVGAAGEPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEARTAAXXXXTSSVHVETSTVSCERGGPGGGGGKEGPRLPDSVGEADA--RRGAGQGGTEFV---TPSEPFFCGELDGIEALSSESVACSAGSGGLADEGQAATAGGDDEEEDEVPLDVTADTSSAEVEELLFLKVAGLVVKLDTFHAMQRVSKLILKSHGACRAYLARLRDAFFKVNAEDLAAVEAALRQAGMSKEEVEAKKAKDWVYFLKRCRRLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVA 875          
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 6.990e-61
Identity = 148/354 (41.81%), Postives = 184/354 (51.98%), Query Frame = 0
Query:  419 VLKPVSFVPHKGAPPPAADEQPREGVKRVSVKDMHSEEG--FVLWDVVHVRLAPAHRSFRGTPVP-AGGSDPDAYQD-DFFDAPKLHRRVLGDEDDESSDDDTPD-----------ESGAGVHASSVGGADASGASADNSPQE-----------------------------RNRGMFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQ---VEMVLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGGCVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGLTKYRCVRGTNDVEGYHRYLRTLLAS 725
            V KP +++PHKGAP  A+      GV RV++KD +S++G   VLWD+ HVRL    +       P A  +D  AY D D F A K    V+  +DDE                    SG G H    GG                                                  VRLD+FHAL R+S+  KK HGAF+PFMARLRDACF+VN DDI++   VE  L  +GMTPE V + K++NW  F+R+CRRLVP    L ERF+ VI +F   VD  S E +LRP A +AV LLRKHI SGCLSDP  + + Y       G+T  RCVRGTN  EGYHRYLR LL++
Sbjct:    5 VFKPAAYIPHKGAPRAAS------GVGRVTMKDANSDKGDRLVLWDIAHVRLVSDWKPLPAAAAPSANANDSAAYDDNDQFYASKRPPHVVHSQDDEDPXXXXXXXXXXXXXXXXXSSGGGDHWVGAGGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVDMDYWVGNGESALKVRLDIFHALQRVSKLCKKSHGAFRPFMARLRDACFIVNLDDIKEASAVEQALAGKGMTPEAVVEYKDKNWTFFVRNCRRLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYT---KSAGITTRRCVRGTNCTEGYHRYLRRLLST 349          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig171.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Q9_ECTSI1.540e-27558.683'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JRJ6_9PHAE1.760e-23461.133'-5' exonuclease domain-containing protein n=1 Ta... [more]
D7FIV2_ECTSI1.200e-19744.723'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5K4M0_9PHAE8.670e-18749.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIV1_ECTSI6.480e-15842.79Similar to Werner syndrome protein n=1 Tax=Ectocar... [more]
A0A6H5JYR4_9PHAE6.390e-8435.503'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JCK3_9PHAE1.850e-7643.573'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5JPK9_9PHAE8.940e-6742.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JET4_9PHAE7.640e-6328.053'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A6H5KLP1_9PHAE6.990e-6141.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 189..375
e-value: 4.6E-30
score: 106.3
IPR0025623'-5' exonuclease domainPFAMPF01612DNA_pol_A_exo1coord: 218..339
e-value: 5.0E-8
score: 32.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..449
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 501..547
NoneNo IPR availablePANTHERPTHR136203-5 EXONUCLEASEcoord: 212..367
NoneNo IPR availableCDDcd06141WRN_exocoord: 211..351
e-value: 7.76761E-30
score: 114.213
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 219..351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig171contigP-littoralis_Contig171:5825..10577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig171.1.3mRNA_P-littoralis_Contig171.1.3Pylaiella littoralis U1_48mRNAP-littoralis_Contig171 4992..11969 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig171.1.3 ID=prot_P-littoralis_Contig171.1.3|Name=mRNA_P-littoralis_Contig171.1.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=726bp
MFGDFDDREGFNGACPSDPYLRDVWHTWFYRTPVIQMCRLRQADGIRMTR
QDYLQRVGQLVDGMVLAGDASFKYAKVIRLTSAGNSKINKPIQGVFTILN
ECEQASYAAVFQKAMKTASLHGLKSDLKNLFINRYLGHGFKLPVLLLSDY
CCEDRAMFVAMFREIEQATGVCLYDATASEAAAGGAPLEAFAFPEDKKGH
VVWDDKAIDLAVAALVESCKTQGDVLGMDCEWEPPFDGSSESAVCTLQLA
LPDGTAYLFHFQRGARRTTSSTSNRNLKRLLNDPSITKVGVAVRGDGTRL
QRDYDVETRGMVDLRSYARACWVDLSCRSLAGMTATALRKSLLKDPARVC
CRHGHFPFFSWQVRLYTNNHASCVALGTVQTKQVARSLLEKWGTDLTLVG
RAGTRSGGFKRVVVKVVDVLKPVSFVPHKGAPPPAADEQPREGVKRVSVK
DMHSEEGFVLWDVVHVRLAPAHRSFRGTPVPAGGSDPDAYQDDFFDAPKL
HRRVLGDEDDESSDDDTPDESGAGVHASSVGGADASGASADNSPQERNRG
MFSVRLDLFHALNRISRTVKKGHGAFKPFMARLRDACFLVNRDDIQQVEM
VLEARGMTPEHVQQVKERNWALFLRSCRRLVPPPDELCERFDRVIEEFGG
CVDNDSREVILRPKAMKAVRLLRKHIVSGCLSDPNGMAMSYAIGKNKGGL
TKYRCVRGTNDVEGYHRYLRTLLAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR0025623'-5'_exonuclease_dom
IPR012337RNaseH-like_sf