prot_P-littoralis_Contig17.198.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig17.198.1
Unique Nameprot_P-littoralis_Contig17.198.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length417
Homology
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BLAST of mRNA_P-littoralis_Contig17.198.1 vs. uniprot
Match: A0A6H5J5B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5B3_9PHAE)

HSP 1 Score: 104 bits (260), Expect = 2.220e-20
Identity = 51/76 (67.11%), Postives = 62/76 (81.58%), Query Frame = 0 
Query:  318 SVESGSGHPALADSCGGIVLRLSPAERSLEPWSTTLAPLRAMCDIDPSLSRAGIDYRSVMHAVEGAQEMKSLHTVK 393
            SV+S   +P + D+ G + LRL+PAERSLEPW T LAP+RAMCDIDPSLSRAGI YR+V+HAVEGAQ+MK+ H  K
Sbjct:  196 SVQSSVVYPRIPDAHGWVSLRLNPAERSLEPWGTALAPMRAMCDIDPSLSRAGIVYRNVIHAVEGAQKMKTCHKAK 271
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BLAST of mRNA_P-littoralis_Contig17.198.1 vs. uniprot
Match: D8LE39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE39_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.890e-6
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 0 
Query:  374 RSVMHAVEGAQEMKSLHTVKQKKAREAKSLLGQDVRPRTSEPR 416
            R V+HAVEGAQ+MK+ H  K +K R+A+SLLGQDVRPRTSEPR
Sbjct:    8 RDVIHAVEGAQKMKTCHKAKIRKERDARSLLGQDVRPRTSEPR 50
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig17.198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J5B3_9PHAE2.220e-2067.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE39_ECTSI1.890e-672.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..308
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..113
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig17contigP-littoralis_Contig17:824698..826584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig17.198.1mRNA_P-littoralis_Contig17.198.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig17 824698..826585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig17.198.1 ID=prot_P-littoralis_Contig17.198.1|Name=mRNA_P-littoralis_Contig17.198.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=417bp
GYTFRFGPGRQSRRLQQIERLRELRVRHSAAGLAHDLAHGAPLSRGSTRG
GKQFSKERKGDDTAYTSSRDRKRRRESSGEANQIERQRLSPKNSLAATTH
FTPYQQQQHEAPPPGLTIKVAHNVVEDPTRGRHDHAKGARGGWSRDDPGL
NSNLTKISHSLGPAKYDGIRTRLDVSTAPKDPLGSLDEGDEGRRAYMGSA
FFPGSDSPLSKPASAPIILPIRSGPALWRPRAGSSQRPIPSSENRCQQQQ
HSCKHNEHNSVAGVTAAAAAAAAAAALGGKDSHGRASSKAGSNAGAMDGG
SSAGNEGNVGTELPVGFSVESGSGHPALADSCGGIVLRLSPAERSLEPWS
TTLAPLRAMCDIDPSLSRAGIDYRSVMHAVEGAQEMKSLHTVKQKKAREA
KSLLGQDVRPRTSEPRL
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