prot_P-littoralis_Contig1.96.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1.96.1
Unique Nameprot_P-littoralis_Contig1.96.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length92
Homology
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BLAST of mRNA_P-littoralis_Contig1.96.1 vs. uniprot
Match: D8LDH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDH1_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 1.050e-12
Identity = 25/36 (69.44%), Postives = 33/36 (91.67%), Query Frame = 0 
Query:   56 MKQMVIKDKEDVKLKTWSTRIRDAAWNFWAGGPPVG 91
            MKQMV+K++++VKL TW +RIR+AAW FWAGGPP+G
Sbjct:    1 MKQMVVKNRDEVKLTTWKSRIRNAAWQFWAGGPPLG 36
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.96.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LDH1_ECTSI1.050e-1269.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:591488..597786 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.96.1mRNA_P-littoralis_Contig1.96.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1 589657..598455 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1.96.1 ID=prot_P-littoralis_Contig1.96.1|Name=mRNA_P-littoralis_Contig1.96.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=92bp
MPTRPSSTAAPTPSDSIRGDPTDNNASGGASAGGGAAAAGGLVIPEGKVA
VWDNTMKQMVIKDKEDVKLKTWSTRIRDAAWNFWAGGPPVG*
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