prot_P-littoralis_Contig1024.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1024.1.1
Unique Nameprot_P-littoralis_Contig1024.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length213
Homology
BLAST of mRNA_P-littoralis_Contig1024.1.1 vs. uniprot
Match: A0A6H5JIB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIB8_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 4.960e-13
Identity = 68/224 (30.36%), Postives = 111/224 (49.55%), Query Frame = 0
Query:    1 EVRAVIGDGSCGCHSTLVGIAGTTPGGVEPLLVYSGNPSLYKGSSKEVAGLYTDINEDTMSDVFGDSWEHEQDREVTVEEDNMLFRLSF--------TETSKPRTKVGQVKTRKTVREVAASVRKRSKY-WLAVCQMALVAAIEEKNIAVWEAKDGGGIRLYQNGHETGLFIGN-SEDIGEFVHLLYSN-GNCTISKLQDGTYPVRNSRVTSQATS--NHFDNI 211
            +V  V GDG C  HS                L++    S++   ++E+     D+  + ++ VF + +E   D  V+ EE   L +  +        T ++    +  + K  KTVREV A +  + ++ +LAV Q+ALVAA++  NI VW+A  GGG+ + + G  TG F+G+   D  EF+HL+Y++ G    +    GT  VRN   ++ A +  NHF  I
Sbjct:   39 KVLKVAGDGHCALHSIY-------------RLLHPERDSVFGALARELTQTRKDVALEMIAAVFSEDYEQLVDNTVSDEEMLRLGKFDYERGFHRKRTPSAGRAARAVRHKPLKTVREVVAGIEDQLEHDYLAVGQLALVAAVKRCNIVVWDATSGGGLLIVEVGDTTGCFVGDLCRD--EFLHLVYNDFGGYNPTTYAAGTTTVRNPSSSNVAETKFNHFSAI 247          
BLAST of mRNA_P-littoralis_Contig1024.1.1 vs. uniprot
Match: A0A6H5K3B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B3_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 5.780e-12
Identity = 63/222 (28.38%), Postives = 103/222 (46.40%), Query Frame = 0
Query:    1 EVRAVIGDGSCGCHSTLVGIAGTTPGGVEPLLVYSGNPSLYKGSSKEVAGLYTDINEDTMSDVFGDSWEHEQDREVTVEEDNMLFRLSF--------TETSKPRTKVGQVKTRKTVREVAASVRKRSKY-WLAVCQMALVAAIEEKNIAVWEAKDGGGIRLYQNGHETGLFIGNSEDIGEFVHLLYSNGNCTISKLQDGTYPVRNSRVTSQATSNHFDNIWV 213
            +V  V GDG C  H                 L++    S++   + E+     D+  + ++ VF + +E   D+ V+ EE   L +L +        T ++    +    K  KTVREV A +  + ++ +LA+ Q+ALVAA++  NI VWEAK GGG+R+ + G  TG F+G+          LY +  CT  +          S   ++ T NHF  I++
Sbjct:   16 KVLEVAGDGHCALHGIY-------------RLLHPERDSVFGALASEITQTRKDVGLEMITAVFSEDYEQLVDKTVSDEEMLRLGKLDYERGFYRKRTPSAGRAARAVGHKPLKTVREVVAGIEDQLEHDYLAIGQLALVAAVKRCNIVVWEAKTGGGLRIVEMGDTTGCFVGD----------LYQDEFCTWLRNPS-------SSNVAETTFNHFSAIFI 207          
BLAST of mRNA_P-littoralis_Contig1024.1.1 vs. uniprot
Match: A0A6H5L3T1_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T1_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.710e-11
Identity = 57/188 (30.32%), Postives = 94/188 (50.00%), Query Frame = 0
Query:    1 EVRAVIGDGSCGCHSTLVGIAGTTPGGVEPLLVYSGNPSLYKGSSKEVAGLYTDINEDTMSDVFGDSWEHEQDREVTVEEDNMLFRLSF--------TETSKPRTKVGQVKTRKTVREVAASVRKRSKY-WLAVCQMALVAAIEEKNIAVWEAKDGGGIRLYQNGHETGLFIGNSEDIGEFVHLLYSN 179
            +V  V GDG C  H                 L++    S++   + E+     D+  + ++ VF   +E   D  V+ EE   L +L +        T ++    +  + K  KTVREV A +  + ++ +LAV Q+A+VAA++  NI VWEA  GGG+R+ + G  TG F+G+     EF+HL+Y++
Sbjct:   39 KVLEVAGDGHCALHCIY-------------RLLHPERDSVFGALASEITQTRKDVALEMIAAVFSKDYEQLVDNTVSDEEMLRLGKLDYERGFYRKRTPSAGRAARAVRRKPLKTVREVVAGIEDQLEHDYLAVGQLAIVAAVKRCNIVVWEATTGGGLRIVEMGDTTGCFVGDLYR-DEFLHLVYND 212          
BLAST of mRNA_P-littoralis_Contig1024.1.1 vs. uniprot
Match: A0A6H5K8T4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T4_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 8.190e-10
Identity = 64/224 (28.57%), Postives = 106/224 (47.32%), Query Frame = 0
Query:    1 EVRAVIGDGSCGCHSTLVGIAGTTPGGVEPLLVYSGNPSLYKGSSKEVAGLYTDINEDTMSDVFGDSWEHEQDREVTVEEDNM-LFRLSF--------TETSKPRTKVGQVKTRKTVREVAASVRKRSKY-WLAVCQMALVAAIEEKNIAVWEAKDGGGIRLYQNGHETGLFIGNSEDIGEFVHLLYSN-GNCTISKLQDGTYPVRN--SRVTSQATSNHFDNI 211
            +V  V  DG C  H                 L++    S++   + E      D+  + ++ VF + +E   D  V   E+ + L +L +        T ++       + K  KT+R+V A +  + ++ +LAV Q+ALVAA++  NIAVWEAK GGG+R+ + G  TG+F+G+     E++HL+Y+  G    +    GT  VR   S   ++   NH   I
Sbjct:  110 KVLEVASDGHCALHRIY-------------RLLHPERDSVFGALASETTQTRKDVVLEMIAAVFSEDYEQLVDNTVVSGEEMLRLGKLGYERGFYRKRTPSAGRAASAVRPKPLKTMRQVVAGIDDQLEHDYLAVGQLALVAAVKRCNIAVWEAKTGGGLRIVEIGDITGIFVGDLNR-DEYLHLVYNYFGGYKAATYAAGTATVRTPTSSNVAERKLNHLSAI 319          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1024.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JIB8_9PHAE4.960e-1330.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3B3_9PHAE5.780e-1228.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3T1_9PHAE1.710e-1130.32DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5K8T4_9PHAE8.190e-1028.57Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1024contigP-littoralis_Contig1024:3659..4297 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1024.1.1mRNA_P-littoralis_Contig1024.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1024 3659..4297 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1024.1.1 ID=prot_P-littoralis_Contig1024.1.1|Name=mRNA_P-littoralis_Contig1024.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=213bp
EVRAVIGDGSCGCHSTLVGIAGTTPGGVEPLLVYSGNPSLYKGSSKEVAG
LYTDINEDTMSDVFGDSWEHEQDREVTVEEDNMLFRLSFTETSKPRTKVG
QVKTRKTVREVAASVRKRSKYWLAVCQMALVAAIEEKNIAVWEAKDGGGI
RLYQNGHETGLFIGNSEDIGEFVHLLYSNGNCTISKLQDGTYPVRNSRVT
SQATSNHFDNIWV
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