mRNA_P-littoralis_Contig167.13.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: A0A6H5L232_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L232_9PHAE) HSP 1 Score: 148 bits (373), Expect = 1.080e-35 Identity = 88/173 (50.87%), Postives = 108/173 (62.43%), Query Frame = 1
Query: 1 MFRVKSNDKETFSATLTASARETNASLTQRRKEMDRAWYGIDAGWQRLQQCMTAIGITNS-SPQEGMVRLNVGGLHVNVDRSVLEGKYDELSTNWTLGNLFEGK*DKRLPRDSDGRFVLNESPSFVKHLVHSLFVHSAAARGSNEFGGGVVGGLTVEEGRPYLGYVGRSLGVS 516
M R N+ +TFSAT+TA ++E A+L QRRK M +AW ++ GW L QC GIT QEGM+RLNVGG H+ R VL+GK E S W LGNLFE D RLPRDSDGR VL++SP+ VK L+HSL S AA GS G L +E YL +V R+LG+S
Sbjct: 1 MSRCHMNEDDTFSATVTAYSKEMEAALGQRRKGMSQAWEDVERGWHELNQCRIDAGITKPFGSQEGMLRLNVGGSHLRFRRCVLDGK-KEPSATWALGNLFESVWDDRLPRDSDGRIVLDKSPACVKDLIHSLIESSGAAPGSLPRGET----LAPDE-MAYLPHVARALGLS 167
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE) HSP 1 Score: 147 bits (372), Expect = 2.400e-35 Identity = 83/174 (47.70%), Postives = 109/174 (62.64%), Query Frame = 1
Query: 1 MFRVKSNDKETFSATLTASARETNASLTQRRKEMDRAWYGIDAGWQRLQQCMTAIGITNS-SPQEGMVRLNVGGLHVNVDRSVLEGKYDELSTNWTLGNLFEGK*DKRLPRDSDGRFVLNESPSFVKHLVHSLFVHSAAARGSNEFGGGVVGGLTVEEGRPYLGYVGRSLGVSG 519
M R +SN+K+TFSATL S+R A+L+QRR EMD W ID GWQ L++ MT +GIT +EG+V+LNVGGL + RSVL+ + + W LGNLFE + DKR+PRDSDG VL+ESP+ VK LVH L S++++ + G G E L Y LG+SG
Sbjct: 1 MLRCQSNEKKTFSATLAVSSRAMEAALSQRRLEMDHEWDSIDEGWQTLRERMTEVGITKPLESKEGIVKLNVGGLLLAFRRSVLDSEGKQQPPTWALGNLFEAEWDKRVPRDSDGHIVLDESPTCVKQLVHRLLTASSSSKATV----GRAGDFARNEDPALLHYTAGVLGLSG 170
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: D7G2H5_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2H5_ECTSI) HSP 1 Score: 142 bits (358), Expect = 1.540e-33 Identity = 81/149 (54.36%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 73 ASLTQRRKEMDRAWYGIDAGWQRLQQCMTAIGITN-SSPQEGMVRLNVGGLHVNVDRSVLEGKYDELSTNWTLGNLFEGK*DKRLPRDSDGRFVLNESPSFVKHLVHSLFVHSAAARGSNEFGGGVVGGLTVEEGRPYLGYVGRSLGVS 516
A L+QRRKEM +AW +D GW L QC GIT S Q+GM+RLNVGG H+N R +L G+ E S W LGNLFE D RLPRDSDGR VL+ESP+ VKHL+HSL S AA GS G L ++E YL YV R+LG+S
Sbjct: 3 AVLSQRRKEMSQAWEDVDRGWHELNQCRIDAGITKPSGSQQGMLRLNVGGSHLNFRRCILAGR-KEPSATWALGNLFESVWDDRLPRDSDGRIVLDESPACVKHLIHSLIESSGAAPGSLPRGDT----LALDE-MVYLPYVARALGLS 145
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: D7FIY4_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIY4_ECTSI) HSP 1 Score: 135 bits (340), Expect = 3.000e-32 Identity = 76/143 (53.15%), Postives = 97/143 (67.83%), Query Frame = 1
Query: 1 MFRVKSNDKETFSATLTASARETNASLTQRRKEMDRAWYGIDAGWQRLQQCMTAIGITNSSP-QEGMVRLNVGGLHVNVDRSVLEGKYDELSTNWTLGNLFEGK*DKRLPRDSDGRFVLNESPSFVKHLVHSLFVHSAAARGS 426
M R +SN+++TFS L ASARETN L+QRRK MD+AW ID GWQ LQ+ M IGIT +EG+V+LNVGG + RSV EGK ++ LG+L E + DKR+PRDSDGR VL+ESP+ VK L H L + A+G+
Sbjct: 65 MLRFQSNEQKTFSEILEASARETNDILSQRRKVMDQAWADIDEGWQALQEHMAKIGITKPLDLKEGLVKLNVGGSLLAFRRSVFEGKGKGATS--ALGSLCEAEWDKRIPRDSDGRIVLDESPTCVKRLFHDLLTPPSLAKGT 205
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: D7FIX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX9_ECTSI) HSP 1 Score: 114 bits (284), Expect = 5.630e-26 Identity = 74/179 (41.34%), Postives = 100/179 (55.87%), Query Frame = 1
Query: 1 MFRVKSNDKETFSATLTASARETNASLTQRRKEMDRAWYGIDAGWQRLQQCMTAIGITNS-SPQEGMVRLNVGGLHVNVDRSVLE----GKYDELSTNWTLGNLFEGK*DKRLPRDSDGRFVLNESPSFVKHLVHSLFVHSAAARGSNEFGGGVVGGLTVEEGRPYLGYVGRSLGVSGQ 522
M R SN+K++FSAT+ A A ET A+L QR + L++ MT +GIT ++G+ +LNVGG V+ RSVL GK + + W L NLFE + DKR+P DSDGR VL+ESP+ VKHLVH L S+ A + G V ++ L Y R LG+SG+
Sbjct: 1 MLRFHSNEKKSFSATMEAFALETEAALAQRWQXXXXXXXXXXXXXXXLRERMTQVGITTPLDSKKGIDKLNVGGSLVSFRRSVLSTEAGGKQQQQPSTWALENLFEAEWDKRVPGDSDGRIVLDESPTCVKHLVHGLLTRSSLAEDTAAREGEVA----CDDKLDLLDYTARVLGLSGR 175
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: D7G141_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G141_ECTSI) HSP 1 Score: 104 bits (259), Expect = 2.980e-20 Identity = 62/179 (34.64%), Postives = 92/179 (51.40%), Query Frame = 1
Query: 1 MFRVKSNDKETFSATLTASARETNASLTQRRKEMDRAWYGIDAGWQRLQQCMTAIGITNSSPQEGMVRLNVGGLHVNVDRSVLEGKYDELSTNWTLGNLFEGK*DKRLPRDSDGRFVLNESPSFVKHLVHSLFVHSAAARGSN-------EFGGGVVGGLTVEEGRPYLGYVGRSLGVS 516
M R ++ F T +A ++ NA+L MD W ++ GW+R QQ + +G+ ++ EG++RLN+GG+ NV RS++ E LG LFE D+R+PRD DGR VL+ESP+ VKH++H+L R G + E PYL Y+ LG+S
Sbjct: 1 MLRRHFKQRDAFRETASAQIKQLNAALDLAISAMDEPWRDLENGWERHQQYLVDVGVRPTTGNEGVLRLNIGGVPANVHRSLIAEA--EGFKGSVLGALFEQMWDERVPRDMDGRIVLDESPACVKHIIHTLLRGGCTTRTKETASLCHFRSAAGPSAAVAAHE-EPYLLYISHVLGLS 176
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: A0A6H5JCR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR8_9PHAE) HSP 1 Score: 103 bits (257), Expect = 3.470e-20 Identity = 68/173 (39.31%), Postives = 94/173 (54.34%), Query Frame = 1
Query: 1 MFRVKSNDKETFSATLTASARETNASLTQRRKEMDRAWYGIDAGWQRLQQCMTAIGI-TNSSPQEGMVRLNVGGLHVNVDRSVLEGKYDELSTNWTLGNLFEGK*-DKRLPRDSDGRFVLNESPSFVKHLVHSLFVHSAAARGSNEFGGGVVGGLTVEEGRPYLGYVGRSLGV 513
MFR N+ E F A+E L R KE + W +D+GW+ L+ M G+ T SS +VRL+VGGL VN+ SVL K S++WTLG+LF+G DKRLP DGR VL+ESP V+ ++ S+ GSN ++ +PY+GYV +LG+
Sbjct: 1 MFRHHPNEHECFLTATKTHAQELEELLEDRAKETKKEWDKLDSGWEALEFKMNETGMSTVSSFHPSIVRLDVGGLDVNIAWSVLREKVVASSSSWTLGDLFKGGVWDKRLPSPEDGRIVLDESPVCVEEILSDGA--SSKRSGSNNL---------PDDEKPYIGYVASALGL 162
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: D7FIX7_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX7_ECTSI) HSP 1 Score: 100 bits (248), Expect = 4.900e-19 Identity = 55/125 (44.00%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 52 ASARETNASLTQRRKEMDRAWYGIDAGWQRLQQCMTAIGITNSSPQEGMVRLNVGGLHVNVDRSVLEGKYDELSTNWTLGNLFEGK*DKRLPRDSDGRFVLNESPSFVKHLVHSLFVHSAAARGS 426
ASAR T A+L+QRR+EMD+AW D GWQ LQ MT EGK ++ S+ W LG+LFE + DKR+PRD+DGR VL+ESP VKHL+ +L + AA G+
Sbjct: 3 ASARATEAALSQRRREMDQAWDDTDQGWQELQAHMT------------------------------EGKGEQPSSTWALGDLFEAEWDKRVPRDADGRIVLDESPICVKHLIEALLLRPNAANGT 97
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: D7FIV0_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV0_ECTSI) HSP 1 Score: 97.1 bits (240), Expect = 5.450e-18 Identity = 59/140 (42.14%), Postives = 83/140 (59.29%), Query Frame = 1
Query: 100 MDRAWYGIDAGWQRLQQCMTAIGITN-SSPQEGMVRLNVGGLHVNVDRSVLEGKYDELSTNWTLGNLFEG-K*DKRLPRDSDGRFVLNESPSFVKHLVHSLFVHSAAARGSNEFGGGVVGGLTVEEGRPYLGYVGRSLGV 513
M + W +D+GW+ L+ M G++ SS Q +VRLNVGGL VN+ RSVL + S+ WTLG+LFEG DKRLPR DGR VL+ESP V+ L+ S+ G++ F ++ +PY+G V +LG+
Sbjct: 1 MKKEWDKLDSGWEALESKMNETGMSMVSSIQPSIVRLNVGGLDVNIARSVLRKAGESSSSTWTLGDLFEGCVWDKRLPRCEDGRIVLDESPVCVEELLCDA---SSKRPGNSNF---------PDDEKPYIGGVASALGL 128
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Match: D7FIU9_ECTSI (TLDc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU9_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 2.060e-16 Identity = 57/140 (40.71%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 100 MDRAWYGIDAGWQRLQQCMTAIGITN-SSPQEGMVRLNVGGLHVNVDRSVLEGKYDELSTNWTLGNLFEG-K*DKRLPRDSDGRFVLNESPSFVKHLVHSLFVHSAAARGSNEFGGGVVGGLTVEEGRPYLGYVGRSLGV 513
M + W +D+GW+ L+ ++ G++ SS VRLNVGGL VN+ RSV + S++WTLG+LFEG DKRLPR DGR VL+ S V+ L L +++ R N L V+E +PY+G V +LG+
Sbjct: 1 MKKEWDTLDSGWEALESKISQAGMSMVSSIPPSFVRLNVGGLDVNIARSVFRKTGEASSSSWTLGDLFEGCVWDKRLPRSEDGRIVLDASAVCVEEL---LCDGASSKRSGNN-------NLPVDE-KPYIGGVASALGL 129 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig167.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig167.13.1 >prot_P-littoralis_Contig167.13.1 ID=prot_P-littoralis_Contig167.13.1|Name=mRNA_P-littoralis_Contig167.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=164bp MWVVPSVCRDRGRRTSGWLGSESVKGGSTILRSSESGPLTSVLQGWCSGNback to top mRNA from alignment at P-littoralis_Contig167:47077..48392+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig167.13.1 ID=mRNA_P-littoralis_Contig167.13.1|Name=mRNA_P-littoralis_Contig167.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1316bp|location=Sequence derived from alignment at P-littoralis_Contig167:47077..48392+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig167:47077..48392+ >mRNA_P-littoralis_Contig167.13.1 ID=mRNA_P-littoralis_Contig167.13.1|Name=mRNA_P-littoralis_Contig167.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=492bp|location=Sequence derived from alignment at P-littoralis_Contig167:47077..48392+ (Pylaiella littoralis U1_48)back to top |