prot_P-fluviatile_contig1.474.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig1.474.1
Unique Nameprot_P-fluviatile_contig1.474.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length398
Homology
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BLAST of mRNA_P-fluviatile_contig1.474.1 vs. uniprot
Match: D8LNG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG0_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 8.150e-25
Identity = 145/341 (42.52%), Postives = 176/341 (51.61%), Query Frame = 0 
Query:    1 MDSNLEAEIDRLARSPSEAGVSSD---------PPTSVAVSSLTKPMILQPQNGRLAEAGGMRTSTAAARDYQQQQAPGQHPGRISRGSSLGSNNGXGNSMRSPQHQHRSGGMAAAAVLAGNHIGDVNQQMPPGANPRQRYHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXERPRPRLAANGEKMAGPSRPXXXXXXXXXXXSASRPAYRPAGMGGXXXXXXXXXXXXXXXXG----------MXXXXXXXSGSVSYSAELPRGVVRK------KGPLSKEEEEWRKNEEALKKKERSVRDALRAKQRTLQQESLLLATVDRELAALAANHQQEVNDLRKT 316
            MDS LE EI RL+R+P+  G SS          PP + A   L+ P I+QPQ+GRLA AGG    TA             HP R+ RGSS GSN+  GN++RSP   HRSG + + AVLAGN I D+  QMP G++                                   E+PR RL      +   +R         XXX  + P  RP+    XXXXXXXXXXXXXXXX           +        G  + +A               KG  SK+EE W+K+E ALKKKE+SVR+AL+ KQRTLQQESLLLATVDRELA LA +HQ EVNDLRKT
Sbjct:    1 MDSGLEEEIARLSRAPAGGGGSSGDGGRSEPIHPPGAPAA--LSTP-IVQPQSGRLA-AGGADGGTAV------------HPPRLRRGSSSGSNS--GNNLRSP---HRSG-LVSGAVLAGNSISDL--QMPAGSS--------------------------------GSPEQPR-RLGGGSGDVGAAAR-----ASSNXXXXXAPPQRRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFVNGEKVAGFGGAATAAXXXXXXXXXXXGKGAKGVTSKQEEAWKKSEAALKKKEQSVRNALKEKQRTLQQESLLLATVDRELAQLALSHQTEVNDLRKT 279
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LNG0_ECTSI8.150e-2542.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 303..330
IPR007033RAB6-interacting golginPFAMPF04949Transcrip_actcoord: 259..381
e-value: 2.0E-13
score: 50.5
IPR007033RAB6-interacting golginPANTHERPTHR21470NTKL-BINDING PROTEIN 1coord: 258..383

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig1contigP-fluviatile_contig1:5244432..5251273 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig1.474.1mRNA_P-fluviatile_contig1.474.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig1 5243457..5251348 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig1.474.1 ID=prot_P-fluviatile_contig1.474.1|Name=mRNA_P-fluviatile_contig1.474.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=398bp
MDSNLEAEIDRLARSPSEAGVSSDPPTSVAVSSLTKPMILQPQNGRLAEA
GGMRTSTAAARDYQQQQAPGQHPGRISRGSSLGSNNGGGNSMRSPQHQHR
SGGMAAAAVLAGNHIGDVNQQMPPGANPRQRYHGGPGGSDSGGSPGQQRQ
QQPSNGGGGGGGERPRPRLAANGEKMAGPSRPLALNGEKMAGPSASRPAY
RPAGMGGGGGGGMGMGGGGMGSGGMGGMGGMGSGSVSYSAELPRGVVRKK
GPLSKEEEEWRKNEEALKKKERSVRDALRAKQRTLQQESLLLATVDRELA
ALAANHQQEVNDLRKTLEVVDRELAFLDRDAQKKLEAFEKARTALSAKVD
EKHKITSRLTELIMASEKQKDAKLNEIMQKMAAAEINGPAGGGGGTY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007033GORAB