prot_P-fluviatile_contig22.4745.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig22.4745.1
Unique Nameprot_P-fluviatile_contig22.4745.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length144
Homology
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: D7G6X7_ECTSI (Chloroplast 50S ribosomal protein 17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X7_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 2.270e-49
Identity = 82/100 (82.00%), Postives = 88/100 (88.00%), Query Frame = 0
Query:   44 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQATRGLLDLVEDDSLSKKQLKSEAP 143
            GTPHHQRQAQ VVREN AVVKLFEVLGPRY +RPGGYTRV+KLQKPRKGDQADMA+IEFVDREGELRPARQVG    TRGL+DLVEDD L+K Q +S  P
Sbjct:   58 GTPHHQRQAQGVVRENAAVVKLFEVLGPRYKDRPGGYTRVMKLQKPRKGDQADMAIIEFVDREGELRPARQVGQ---TRGLVDLVEDDFLTKDQKESSLP 154          
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A835Z8L6_9STRA (Chloroplast 50S ribosomal protein 17 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L6_9STRA)

HSP 1 Score: 105 bits (261), Expect = 4.730e-26
Identity = 49/76 (64.47%), Postives = 62/76 (81.58%), Query Frame = 0
Query:   44 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQ 119
            GT H +R AQ+ +++ GA+ KLF+VLGPRY  RPGGYTR+LKL  PR GD+ADM +IEFVDR+GELRPAR VG ++
Sbjct:   61 GTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARPVGKDK 136          
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S3QJX6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJX6_9STRA)

HSP 1 Score: 100 bits (248), Expect = 4.420e-24
Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 0
Query:   44 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQATRGLLDLVE--DDSLSKKQLKS 140
            G+ H +R A  VVRE  AV KLFEVLGPRY +R GGYTRVLKL KPR+GD A MAV+E+VDR GE+R AR        +G  DL++  D++L    +K+
Sbjct:   58 GSLHSRRLADKVVREEPAVTKLFEVLGPRYQDREGGYTRVLKLSKPRQGDNAPMAVLEYVDRPGEIRAARP------PKGRFDLLDTLDEALENVGIKT 150          
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S2LPJ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPJ0_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.050e-22
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 0
Query:   44 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQATRGLLDLVEDDSLSK 135
            G+ H +RQA A++RE  A+ KLFEVLGPRY  R GGYTRVL+L KPR GD A M++IE+VDR GE+R A+   + Q +  L D++ +  + K
Sbjct:   58 GSLHARRQADAILREKPALTKLFEVLGPRYAERDGGYTRVLQLAKPRTGDNAPMSIIEYVDRPGEIRAAKPPASKQKSV-LADVLSEVGIEK 148          
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S2WK90_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WK90_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 1.550e-22
Identity = 49/95 (51.58%), Postives = 63/95 (66.32%), Query Frame = 0
Query:   34 NAIARPAFFPGTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQATRGLLDLV 128
            N +A         H  + A + VR+   ++KL   LGPRY++R GGYTRVLKLQ+PR GD+AD AVIE+VDR+GELRPA+       T+GL DLV
Sbjct:   93 NQVAAKTAAAAAQHQLKLANSSVRQRPVLIKLLHQLGPRYLDRDGGYTRVLKLQRPRPGDKADRAVIEYVDRDGELRPAKP--PRSTTQGLKDLV 185          
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S0ASE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASE6_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.420e-22
Identity = 46/70 (65.71%), Postives = 56/70 (80.00%), Query Frame = 0
Query:   44 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPAR 113
            G+ H +RQA AV+RE   + KLFE+LGPRY  R GGYTRVLKL +PR+GD AD+AVIE+VDR GE+R AR
Sbjct:   96 GSLHSRRQAGAVIRERPVLTKLFEILGPRYEEREGGYTRVLKLSRPREGDNADLAVIEYVDRPGEVRAAR 165          
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S3M8Y7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8Y7_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.450e-22
Identity = 47/70 (67.14%), Postives = 53/70 (75.71%), Query Frame = 0
Query:   44 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPAR 113
            G   H+R A   VRE  A+VKLFE+LGPRY  R GGYTRV+KL KPR+GD A MA +EFVDREGELR AR
Sbjct:   58 GNLTHRRLAAGFVREKPALVKLFEILGPRYAEREGGYTRVMKLMKPRRGDSAAMAYVEFVDREGELRKAR 127          
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S3PMY3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMY3_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.510e-21
Identity = 49/92 (53.26%), Postives = 66/92 (71.74%), Query Frame = 0
Query:   44 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQATR----GLLDLVEDD 131
            G+ H +RQ+  VVR+  A+ KLF+VLGPRY+NRPGG+TR++++   R+GD ADM V+EFVD+EGELR A+ V  N   R    GL  L+E D
Sbjct:   58 GSLHARRQSLKVVRDKAAMHKLFDVLGPRYINRPGGFTRIVRVGH-RRGDAADMCVMEFVDKEGELRKAKPVDENTVKRNRGIGLQILLEQD 148          
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A1E7FQ30_9STRA (Ribosomal protein L17 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQ30_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.060e-21
Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 0
Query:   47 HHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPAR 113
            H++R A  V+R +  + KLFEVLGPRY+ R GGYTRVLKL KPR GD A MAVIE+VDR GE+RPAR
Sbjct:   89 HYRRMASKVIRGDWNITKLFEVLGPRYILRQGGYTRVLKLSKPRAGDNAPMAVIEYVDRPGEIRPAR 155          
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S1ZRF2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRF2_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 4.200e-21
Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 0
Query:   44 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQATRGLLDLVEDDSLSKKQLK 139
            G+ H +RQA AV+RE   + KL EVLGPRY +R GGYTR+LKL + R GD A MAVIE+VDR GE+R AR     +    LL + +DD   KK LK
Sbjct:   58 GSLHARRQADAVLREKPVLTKLIEVLGPRYADRDGGYTRILKLSQNRVGDNAKMAVIEYVDRPGEIRAARV--PKKRMEKLLMMGDDDG-EKKNLK 150          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6X7_ECTSI2.270e-4982.00Chloroplast 50S ribosomal protein 17 n=2 Tax=Ectoc... [more]
A0A835Z8L6_9STRA4.730e-2664.47Chloroplast 50S ribosomal protein 17 n=1 Tax=Tribo... [more]
A0A7S3QJX6_9STRA4.420e-2454.55Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2LPJ0_9STRA1.050e-2252.17Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2WK90_9STRA1.550e-2251.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0ASE6_9STRA2.420e-2265.71Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S3M8Y7_9STRA2.450e-2267.14Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S3PMY3_9STRA1.510e-2153.26Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A1E7FQ30_9STRA4.060e-2167.16Ribosomal protein L17 n=1 Tax=Fragilariopsis cylin... [more]
A0A7S1ZRF2_9STRA4.200e-2154.17Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000456Ribosomal protein L17PFAMPF01196Ribosomal_L17coord: 45..103
e-value: 1.4E-15
score: 57.9
IPR000456Ribosomal protein L17PANTHERPTHR14413RIBOSOMAL PROTEIN L17coord: 44..135
IPR036373Ribosomal protein L17 superfamilyGENE3D3.90.1030.10coord: 25..109
e-value: 2.0E-18
score: 68.9
IPR036373Ribosomal protein L17 superfamilySUPERFAMILY64263Prokaryotic ribosomal protein L17coord: 44..110
NoneNo IPR availablePANTHERPTHR14413:SF1639S RIBOSOMAL PROTEIN L17, MITOCHONDRIALcoord: 44..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:377554..379795 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4745.1mRNA_P-fluviatile_contig22.4745.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig22 376760..380249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig22.4745.1 ID=prot_P-fluviatile_contig22.4745.1|Name=mRNA_P-fluviatile_contig22.4745.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=144bp
MPTARLRVVVKNFSPLRPFIPRPHTPRRQSWVRNAIARPAFFPGTPHHQR
QAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVI
EFVDREGELRPARQVGTNQATRGLLDLVEDDSLSKKQLKSEAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000456Ribosomal_L17
IPR036373Ribosomal_L17_sf