mRNA_P-fluviatile_contig22.4745.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig22.4745.1
Unique NamemRNA_P-fluviatile_contig22.4745.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: D7G6X7_ECTSI (Chloroplast 50S ribosomal protein 17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6X7_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 2.940e-44
Identity = 82/100 (82.00%), Postives = 88/100 (88.00%), Query Frame = 2 
Query:  584 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQATRGLLDLVEDDSLSKKQLKSEAP 883
            GTPHHQRQAQ VVREN AVVKLFEVLGPRY +RPGGYTRV+KLQKPRKGDQADMA+IEFVDREGELRPARQVG    TRGL+DLVEDD L+K Q +S  P
Sbjct:   58 GTPHHQRQAQGVVRENAAVVKLFEVLGPRYKDRPGGYTRVMKLQKPRKGDQADMAIIEFVDREGELRPARQVGQ---TRGLVDLVEDDFLTKDQKESSLP 154
[Close]
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A835Z8L6_9STRA (Chloroplast 50S ribosomal protein 17 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L6_9STRA)

HSP 1 Score: 105 bits (261), Expect = 7.380e-23
Identity = 49/76 (64.47%), Postives = 62/76 (81.58%), Query Frame = 2 
Query:  584 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQ 811
            GT H +R AQ+ +++ GA+ KLF+VLGPRY  RPGGYTR+LKL  PR GD+ADM +IEFVDR+GELRPAR VG ++
Sbjct:   61 GTLHSRRLAQSTIQDKGALDKLFKVLGPRYEERPGGYTRILKLATPRLGDKADMCLIEFVDRQGELRPARPVGKDK 136
[Close]
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S3QJX6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJX6_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 8.390e-21
Identity = 54/99 (54.55%), Postives = 68/99 (68.69%), Query Frame = 2 
Query:  584 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQATRGLLDLVE--DDSLSKKQLKS 874
            G+ H +R A  VVRE  AV KLFEVLGPRY +R GGYTRVLKL KPR+GD A MAV+E+VDR GE+R AR        +G  DL++  D++L    +K+
Sbjct:   58 GSLHSRRLADKVVREEPAVTKLFEVLGPRYQDREGGYTRVLKLSKPRQGDNAPMAVLEYVDRPGEIRAARP------PKGRFDLLDTLDEALENVGIKT 150
[Close]
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S2LPJ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPJ0_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.470e-19
Identity = 48/92 (52.17%), Postives = 65/92 (70.65%), Query Frame = 2 
Query:  584 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQATRGLLDLVEDDSLSK 859
            G+ H +RQA A++RE  A+ KLFEVLGPRY  R GGYTRVL+L KPR GD A M++IE+VDR GE+R A+   + Q +  L D++ +  + K
Sbjct:   58 GSLHARRQADAILREKPALTKLFEVLGPRYAERDGGYTRVLQLAKPRTGDNAPMSIIEYVDRPGEIRAAKPPASKQKSV-LADVLSEVGIEK 148
[Close]
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S3M8Y7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8Y7_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.730e-19
Identity = 47/70 (67.14%), Postives = 53/70 (75.71%), Query Frame = 2 
Query:  584 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPAR 793
            G   H+R A   VRE  A+VKLFE+LGPRY  R GGYTRV+KL KPR+GD A MA +EFVDREGELR AR
Sbjct:   58 GNLTHRRLAAGFVREKPALVKLFEILGPRYAEREGGYTRVMKLMKPRRGDSAAMAYVEFVDREGELRKAR 127
[Close]
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S0ASE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASE6_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.030e-19
Identity = 46/70 (65.71%), Postives = 56/70 (80.00%), Query Frame = 2 
Query:  584 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPAR 793
            G+ H +RQA AV+RE   + KLFE+LGPRY  R GGYTRVLKL +PR+GD AD+AVIE+VDR GE+R AR
Sbjct:   96 GSLHSRRQAGAVIRERPVLTKLFEILGPRYEEREGGYTRVLKLSRPREGDNADLAVIEYVDRPGEVRAAR 165
[Close]
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S2WK90_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WK90_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.280e-19
Identity = 49/95 (51.58%), Postives = 63/95 (66.32%), Query Frame = 2 
Query:  554 NAIARPAFFPGTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQATRGLLDLV 838
            N +A         H  + A + VR+   ++KL   LGPRY++R GGYTRVLKLQ+PR GD+AD AVIE+VDR+GELRPA+       T+GL DLV
Sbjct:   93 NQVAAKTAAAAAQHQLKLANSSVRQRPVLIKLLHQLGPRYLDRDGGYTRVLKLQRPRPGDKADRAVIEYVDRDGELRPAKP--PRSTTQGLKDLV 185
[Close]
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S3PMY3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMY3_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.600e-18
Identity = 49/92 (53.26%), Postives = 66/92 (71.74%), Query Frame = 2 
Query:  584 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQATR----GLLDLVEDD 847
            G+ H +RQ+  VVR+  A+ KLF+VLGPRY+NRPGG+TR++++   R+GD ADM V+EFVD+EGELR A+ V  N   R    GL  L+E D
Sbjct:   58 GSLHARRQSLKVVRDKAAMHKLFDVLGPRYINRPGGFTRIVRVGH-RRGDAADMCVMEFVDKEGELRKAKPVDENTVKRNRGIGLQILLEQD 148
[Close]
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A1E7FQ30_9STRA (Ribosomal protein L17 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQ30_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.620e-18
Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 2 
Query:  593 HHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPAR 793
            H++R A  V+R +  + KLFEVLGPRY+ R GGYTRVLKL KPR GD A MAVIE+VDR GE+RPAR
Sbjct:   89 HYRRMASKVIRGDWNITKLFEVLGPRYILRQGGYTRVLKLSKPRAGDNAPMAVIEYVDRPGEIRPAR 155
[Close]
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Match: A0A7S1ZRF2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRF2_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 4.190e-18
Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 2 
Query:  584 GTPHHQRQAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVIEFVDREGELRPARQVGTNQATRGLLDLVEDDSLSKKQLK 871
            G+ H +RQA AV+RE   + KL EVLGPRY +R GGYTR+LKL + R GD A MAVIE+VDR GE+R AR     +    LL + +DD   KK LK
Sbjct:   58 GSLHARRQADAVLREKPVLTKLIEVLGPRYADRDGGYTRILKLSQNRVGDNAKMAVIEYVDRPGEIRAARV--PKKRMEKLLMMGDDDG-EKKNLK 150
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig22.4745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6X7_ECTSI2.940e-4482.00Chloroplast 50S ribosomal protein 17 n=2 Tax=Ectoc... [more]
A0A835Z8L6_9STRA7.380e-2364.47Chloroplast 50S ribosomal protein 17 n=1 Tax=Tribo... [more]
A0A7S3QJX6_9STRA8.390e-2154.55Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2LPJ0_9STRA1.470e-1952.17Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3M8Y7_9STRA1.730e-1967.14Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S0ASE6_9STRA2.030e-1965.71Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S2WK90_9STRA2.280e-1951.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3PMY3_9STRA1.600e-1853.26Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A1E7FQ30_9STRA2.620e-1867.16Ribosomal protein L17 n=1 Tax=Fragilariopsis cylin... [more]
A0A7S1ZRF2_9STRA4.190e-1854.17Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig22contigP-fluviatile_contig22:376760..380249 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score164.1
Seed ortholog evalue4.9e-38
Seed eggNOG ortholog2880.D7G6X7
KEGG rclassRC00293,RC01792,RC01815,RC02504
KEGG koko:K02879,ko:K14652
KEGG ReactionR00425,R07281
KEGG Pathwayko00740,ko00790,ko01100,ko01110,ko03010,map00740,map00790,map01100,map01110,map03010
KEGG ModuleM00125,M00178,M00840
GOsGO:0000002,GO:0000313,GO:0000315,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005761,GO:0005762,GO:0005829,GO:0005840,GO:0006996,GO:0007005,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022625,GO:0022626,GO:0031974,GO:0032991,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070013,GO:0071840,GO:0098798,GO:1990904
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG0203@1,KOG3280@2759
EC3.5.4.25,4.1.99.12
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionRibosomal protein L17
Ec32 orthologEc-01_011850.1
Exons3
Model size1680
Cds size432
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig22.4745.1prot_P-fluviatile_contig22.4745.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig22 377554..379795 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815964.602512-UTR-P-fluviatile_contig22:376759..3775531622815964.602512-UTR-P-fluviatile_contig22:376759..377553Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 376760..377553 -
1693563884.9087152-UTR-P-fluviatile_contig22:376759..3775531693563884.9087152-UTR-P-fluviatile_contig22:376759..377553Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 376760..377553 -
1622815964.652462-UTR-P-fluviatile_contig22:379795..3802491622815964.652462-UTR-P-fluviatile_contig22:379795..380249Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 379796..380249 -
1693563884.949975-UTR-P-fluviatile_contig22:379795..3802491693563884.949975-UTR-P-fluviatile_contig22:379795..380249Porterinema fluviatile SAG_2381UTRP-fluviatile_contig22 379796..380249 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815964.6140609-CDS-P-fluviatile_contig22:377553..3776711622815964.6140609-CDS-P-fluviatile_contig22:377553..377671Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 377554..377671 -
1693563884.9221318-CDS-P-fluviatile_contig22:377553..3776711693563884.9221318-CDS-P-fluviatile_contig22:377553..377671Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 377554..377671 -
1622815964.6251945-CDS-P-fluviatile_contig22:378485..3785781622815964.6251945-CDS-P-fluviatile_contig22:378485..378578Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 378486..378578 -
1693563884.929991-CDS-P-fluviatile_contig22:378485..3785781693563884.929991-CDS-P-fluviatile_contig22:378485..378578Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 378486..378578 -
1622815964.640218-CDS-P-fluviatile_contig22:379574..3797951622815964.640218-CDS-P-fluviatile_contig22:379574..379795Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 379575..379795 -
1693563884.9374886-CDS-P-fluviatile_contig22:379574..3797951693563884.9374886-CDS-P-fluviatile_contig22:379574..379795Porterinema fluviatile SAG_2381CDSP-fluviatile_contig22 379575..379795 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig22.4745.1

>prot_P-fluviatile_contig22.4745.1 ID=prot_P-fluviatile_contig22.4745.1|Name=mRNA_P-fluviatile_contig22.4745.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=144bp
MPTARLRVVVKNFSPLRPFIPRPHTPRRQSWVRNAIARPAFFPGTPHHQR
QAQAVVRENGAVVKLFEVLGPRYMNRPGGYTRVLKLQKPRKGDQADMAVI
EFVDREGELRPARQVGTNQATRGLLDLVEDDSLSKKQLKSEAP*
back to top

mRNA from alignment at P-fluviatile_contig22:376760..380249-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig22.4745.1 ID=mRNA_P-fluviatile_contig22.4745.1|Name=mRNA_P-fluviatile_contig22.4745.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3490bp|location=Sequence derived from alignment at P-fluviatile_contig22:376760..380249- (Porterinema fluviatile SAG_2381)
CACGGCAGGCTGCGCGAAAGCTTGCATGTGTATTATCCGTAATCACTGTC
GCTATACGCCAGCGTATACGGATATCACCCTCTACCGGAAACTGTTTAAT
CTACCTTGTTTTTCAGCATCTGAATGCACATTATTGTGCAGCGTTTTTTG
ACGGAGGGCCAAGCCAACGTACCACATCGAAGCCTCGTGTGAATTGGCCA
CAGTGGTACGAGGGTCGAGGATCAATGCAATATCTCCAAGGTGAATTCTG
TTACAGCTTTAGTTCTACGGAATCTTTCAGGAAGAACATGCTGCCTCGGG
TATCTTACACGACTCGAGGAACACGAAAAGGACTGAGTGCCACGGGCATG
CGCCAATACATCTGCGACAGATAGGTCAAACTTGCACTACGCACGTCTTC
CGGCGGCGGCTTTTTTGAGCAGTTCTGGATGAAGAAGGAGTGGCACACAT
CCTGATGCCCACAGCACGCCTTCGGGTAGTGGTCAAGAATTTTTCACCAC
TACGCCCGTTCATCCCACGCCCACACACGCCCCGCCGACAATCATGGGTC
AGAAACGCCATCGCCCGGCCCGCGTTTTTCCCAGGAACTCCTCACCACCA
GCGCCAAGCTCAAGCAGTGGTTCGGGAAAATGGAGCGGTTGTGAAGCTCT
TCGAGGTTCTTGGACCGAGATACATGTAAGTTTTGCGATTTTCATGCGCT
TGTTGCACTTGTTTCGAGCAGCGGGGCCTGGACTTTCAGGAAACGAAGAC
GGGGTTGCCAAGGAGTTGACAAGACAGGGACGTCCGTTGCCCTCTTGATG
TGCACGAAGTATGTCAAGGAGATCTCGAACAGTTGAAACATTTGAGCTTC
ATGTTGAGGGAGGGTGAAGGAGGTCGATATCCTCGCGAAGGGTTACGAGA
AAGTACGTTGCATGGTGACAGACTACAGCGTTGGCGAGAGCCATAAAAGA
CCTCAAATGGGAAATTGACTATTTACATGAGAAAGCGGGGAAGGAGATGA
GACGAGTCAGGTTTGCTGTCTTGCCATGAGCGCCCACGTCGTTGGTACCT
TACGAAGGTGTGAGATCGATGCTCTGTCATGAACATTTAAATGGTTACGA
TCAAATGATATTGATCATCGACAAAAATTGAACGCCTTTTAAACTGCTCG
TGACGCCAGAACCGCTTCCTTGATTCAATCCATGCACCTTTAGGTCCGAC
CTTGCATCTTGACTGTTTAGCTTTCTTGCTGCTAAAGTTACGAAAATACA
GGGCGTGAATACTATCTGCACGTCGTCCCGGCAGGGTTGAATGAAAGTGG
ACGCGCGTGTACCACTTGCACGAACTGCATCTCCGGAGTGACCCCAACCT
ATGTGTTCCTTTTTTCCCATTTGGGGAGACACATGGCAGCACATCTGAGC
GTTGGCATGCTGAAGGATAGCAGCATTAGCGGAACCTCGAATTCAGCACG
ATGCGCCCACCCTCACCCACGTAGAAAGTAACCCCAGCTGTTTCCAGTAT
CACACGGGGCCACAACATGATGACGGCAGAATAAGTGGCAGTGCTTGGCG
CGGATTGGCTTGACTTCTTCCGCAGTGCTATCGCCTGGCGCAAGCAAGCA
CCCGCGCCATTCCCTCACCGTTTCTGCATGTTTGTCCTACATGTTGCTGC
GCCATTAACTCTGTGATTCAGGAACAGGCCAGGGGGCTACACACGAGTCT
TAAAGCTGCAGAAGCCGCGCAAGGGTGACCAGGCCGACATGGCCGTTATC
GAGTTCGTCGACAGGTGAAAACCACGGAACGAACCTCCTCTCTCACCCCA
CCGCCGTGCTCCACAGGCAATGTTTGCATATGAGCCAGCCGCCTCACGCT
TGCAGAAATGTGTCCTGTGGAGGAAAACTACTTAGCCAATGGTCTGGGTC
CTGCCCACGACGCAATATGTTGCGTTGAGTAAACTATAAAGTCACGTTCA
GGACCCTGGCTAGGTGGTGTAAGTCGTAGCCCAATAACCGCGGAAGGCTG
GTTTTGTTCGTTAATTTGGAAAGAGAGAGGAGAGACCCATGGAAAACGAA
GTGAACAGATGCAGAGCGCCCGAAGAGCGATTTAGCCTCTTCCACCAAGG
AGTGCGGTAAAGATCGATCTTGAGCAGAGTTCTTGAGCAGAGTTTTTGAT
GAACCCACGGTTTTCGAGACAATCCGCCGAAGATAAAATATCTTCCTATC
TGAGTGTGACGCGTTTGATATCCATGCCTACCAGGCTAGCAATATGCCTA
ATGGCCGTAGTGGCCTGCGTATTACTCAGCACCTGCGTCCTGCTGCAATC
CCTGAAAGCCGACCGGCGCTTGTTCCGAAAGACCTCTATTGTTCGACAGA
AGGTCTCCGGTGCCTGCCTGTATCTCGCAACAAGCGTATGTATGGGCACA
TCACTCTCTATACCTCACACCCGCAATGTGGGTAAAGTGTCAACAACTAG
ACTGCATTACAGTCCTAAAGTAGACTAAATGCCCCGCCTGAGAGCATGAC
TGAAAAGCGGATGAGCAACGCGCAAACCTAAGCGTGGTATTCATACCGAC
ATGGACGCCACGGCTTTGAACCACGCAGGGAGGGAGAGCTGCGGCCAGCC
CGGCAAGTCGGCACAAATCAAGCCACCCGCGGGCTGCTAGACCTGGTGGA
AGACGACTCGTTGTCAAAGAAACAGCTCAAGTCTGAGGCGCCTTGAGTCC
CCGCAACACTTGATCATCAGACCGGTCTTCTGTAGGCAATGCAATGCACG
ACTGCATCAACTATATTTTCGGCTAGGGTGGGAGAAGTGGTGGTGAGAGG
GACCAGGGACTGGCGCATCATGATTACTTGCTGTTTGGGCCCCGTCGGTG
TAGTCGGGTACTGTCCTGCTTAGTAATGGTTCACTGGAGGCGGAGCTGAC
GAAAAGTTTTTTGTTTTTTGAGGCAAACGATGAAACTGGTGCAGCGAGGC
ATGTGGACGCGGACCCAATCTCAAGATAGACAAGCCCATGAAAAGCAAGC
TATTCCACGTGGCAACCTTTTCGTGGGCAACCTTGAAATGCTGGGCGATG
ATGTTGAGCAGTCATTTGCCCACCATGCAACGGCTTCTGTCACCGTTGCT
GACTGGTGGAAAGCAGGCAAAGCGACTTTCTTGCTTTGCATGAACTTATT
TATCTCATTCTTCTATGATCCATAAGGAGACCAAATTGAAAAAGGATCCA
GATGAGGCACGGTTCTTGTAGAGTTCCACCAAAAATGTGTCAACGTGGAT
AGCGTGTGGGGTAATCGCTCGTTCGTGTTTTGCATGGAGGTAGACCGACG
TGAAACCCTTTTTTCGGGGCTTTTCGTGGCAGAACCAACACCTCTTTGCA
ACCTGTGCGCTTTACATGACGTCGCGTGGAAGGCACTGCGAGATTTCTTG
TGACCCAACGAGTCGGGCGCATCCGGCACACAAGTTGTAGGAGAGACAAG
GGATGTTCCCACCTTCGTGAAAACTTTGGGAGAAGGTACA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig22:376760..380249-

>mRNA_P-fluviatile_contig22.4745.1 ID=mRNA_P-fluviatile_contig22.4745.1|Name=mRNA_P-fluviatile_contig22.4745.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=864bp|location=Sequence derived from alignment at P-fluviatile_contig22:376760..380249- (Porterinema fluviatile SAG_2381)
ATGCCCACAGCACGCCTTCGGGTAGTGGTCAAGAATTTTTCACCACTACG
CCCGTTCATCCCACGCCCACACACGCCCCGCCGACAATCATGGGTCAGAA
ACGCCATCGCCCGGCCCGCGTTTTTCCCAGGAACTCCTCACCACCAGCGC
CAAGCTCAAGCAGTGGTTCGGGAAAATGGAGCGGTTGTGAAGCTCTTCGA
GGTTCTTGGACCGAGATACATATGCCCACAGCACGCCTTCGGGTAGTGGT
CAAGAATTTTTCACCACTACGCCCGTTCATCCCACGCCCACACACGCCCC
GCCGACAATCATGGGTCAGAAACGCCATCGCCCGGCCCGCGTTTTTCCCA
GGAACTCCTCACCACCAGCGCCAAGCTCAAGCAGTGGTTCGGGAAAATGG
AGCGGTTGTGAAGCTCTTCGAGGTTCTTGGACCGAGATACATGAACAGGC
CAGGGGGCTACACACGAGTCTTAAAGCTGCAGAAGCCGCGCAAGGGTGAC
CAGGCCGACATGGCCGTTATCGAGTTCGTCGACAGGAACAGGCCAGGGGG
CTACACACGAGTCTTAAAGCTGCAGAAGCCGCGCAAGGGTGACCAGGCCG
ACATGGCCGTTATCGAGTTCGTCGACAGGGAGGGAGAGCTGCGGCCAGCC
CGGCAAGTCGGCACAAATCAAGCCACCCGCGGGCTGCTAGACCTGGTGGA
AGACGACTCGTTGTCAAAGAAACAGCTCAAGTCTGAGGCGCCTTGAGGAG
GGAGAGCTGCGGCCAGCCCGGCAAGTCGGCACAAATCAAGCCACCCGCGG
GCTGCTAGACCTGGTGGAAGACGACTCGTTGTCAAAGAAACAGCTCAAGT
CTGAGGCGCCTTGA
back to top