prot_P-fluviatile_contig20.4368.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig20.4368.1
Unique Nameprot_P-fluviatile_contig20.4368.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length273
Homology
BLAST of mRNA_P-fluviatile_contig20.4368.1 vs. uniprot
Match: A0A6H5JNM9_9PHAE (TauD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM9_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 5.870e-16
Identity = 58/137 (42.34%), Postives = 71/137 (51.82%), Query Frame = 0
Query:  126 EVDTYMVPNGIQVRTAWVTTAIDYLSSTEPPSTXXXXXXXXXXPAESTRPDDQPQQVLKISWGDAGSSGVAECHQSRHVGEGEQNPGPGTIPITWLRQHCTSPTARELRRRYGGLAAARASPRPRPVLWCADVFSPG 262
            +VDT+ VPN +QVR A V +          PS+             ST   D+   VL++SWGD     +    Q    G+   N    TIPI WLR+HCTS TAR+LRRR+GG A       PRPVLW ADVFS G
Sbjct:   24 QVDTFQVPNNLQVRNASVAS----------PSSPDDARGGDG----STATTDRQAHVLRVSWGD-----IPAGPQDTRDGKEGPNTNTSTIPIDWLRRHCTSATARDLRRRHGGPADGPGL-HPRPVLWGADVFSAG 140          
BLAST of mRNA_P-fluviatile_contig20.4368.1 vs. uniprot
Match: A0A6H5JP06_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP06_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 1.610e-15
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   62 EPRNSWDRFLRGGAAGVAHVRVVRQQEGT-EKVQLSWEDGHESEFSAKWLRDHCTEAFNLHTKQREV 127
            E +++W RF+ GG  G++   VV+   G  ++V +SW DGH+SEFS KWLRDH  +AFN HTKQR+V
Sbjct:   33 EAQDAWRRFVEGGRHGISAAVVVQPGGGVGQRVSVSWVDGHKSEFSTKWLRDHAADAFNSHTKQRQV 99          
BLAST of mRNA_P-fluviatile_contig20.4368.1 vs. uniprot
Match: D7FLG6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG6_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 8.770e-15
Identity = 34/66 (51.52%), Postives = 47/66 (71.21%), Query Frame = 0
Query:   62 EPRNSWDRFLRGGAAGVAHVRVVRQQEGT-EKVQLSWEDGHESEFSAKWLRDHCTEAFNLHTKQRE 126
            E +++W RF+ GG  G++   VV+   G  ++V +SW DGH+SEFS KWLRDH  +AFN HTKQR+
Sbjct:   33 EAQDAWRRFVEGGRHGISAAVVVQPGGGVGQRVGVSWADGHKSEFSTKWLRDHAADAFNSHTKQRQ 98          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig20.4368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JNM9_9PHAE5.870e-1642.34TauD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JP06_9PHAE1.610e-1552.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLG6_ECTSI8.770e-1551.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038492GBBH-like, N-terminal domain superfamilyGENE3D3.30.2020.30coord: 78..152
e-value: 9.5E-9
score: 37.2
IPR010376Gamma-butyrobetaine hydroxylase-like, N-terminalPFAMPF06155DUF971coord: 86..137
e-value: 3.8E-6
score: 27.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig20contigP-fluviatile_contig20:1745463..1747174 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig20.4368.1mRNA_P-fluviatile_contig20.4368.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig20 1745463..1747174 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig20.4368.1 ID=prot_P-fluviatile_contig20.4368.1|Name=mRNA_P-fluviatile_contig20.4368.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=273bp
DRSESEETLNPRKQANTGRHMKTLVTLCRFSVSIVAPCRRTRIPGIRSVA
TWPSRDDVHPAEPRNSWDRFLRGGAAGVAHVRVVRQQEGTEKVQLSWEDG
HESEFSAKWLRDHCTEAFNLHTKQREVDTYMVPNGIQVRTAWVTTAIDYL
SSTEPPSTSTAAAAAAAAPAESTRPDDQPQQVLKISWGDAGSSGVAECHQ
SRHVGEGEQNPGPGTIPITWLRQHCTSPTARELRRRYGGLAAARASPRPR
PVLWCADVFSPGAAAAACLHHDE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038492GBBH-like_N_sf
IPR010376GBH-like_N