mRNA_P-fluviatile_contig18.3196.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig18.3196.1 vs. uniprot
Match: A0A6H5L290_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L290_9PHAE) HSP 1 Score: 318 bits (814), Expect = 2.130e-98 Identity = 175/253 (69.17%), Postives = 203/253 (80.24%), Query Frame = 3
Query: 210 PVTRAQVLGTIPAAIWGAMILGTV--EPATAAIPTAEDYAFGSGSKKRPAGASTPTRPESSADDCPDCSLLARRQRTAAXXXXXXXSPKSPEQLKRPEMKDDLSAPVPKSSVNPNNPAEVVRAVSGELDLMQALVNKERWGDALTRLRSYPLTTLKSPTLGMGSVGDVARALGVDKSKAADILEASMEAGLTLREVEDIVFSNTRTLEFFNSADFKQVEDLARNRKPTDLTEPLQLLADTKRLVEGVSELIGA 962
P++RAQ+L +P + A EPA AA+PT EDYAFG+GSK A S T+ + S D CPDCSL RR+R A+ SP ++KRPE++DDLSAP+PKSSVNP+NP EVVRAVSGELD MQ LVNKERWGDALTRLRSYPLT LKSPTLGM SVGDVARALGV SKA+DILEASMEAGLTLR+VED+VFSNTRTLEFFNSAD+KQVEDLA++R PTDLTEPLQLL+DTK+LV GV++L+GA
Sbjct: 48 PLSRAQMLRAVPVLVGVAAFHSATPAEPARAALPTTEDYAFGTGSKTS-ARTSASTQGQESKDACPDCSLSERRKRAASSSAVQS----SPSKVKRPEVQDDLSAPLPKSSVNPDNPVEVVRAVSGELDRMQTLVNKERWGDALTRLRSYPLTALKSPTLGMKSVGDVARALGVSNSKASDILEASMEAGLTLRQVEDVVFSNTRTLEFFNSADYKQVEDLAKDRTPTDLTEPLQLLSDTKKLVRGVADLMGA 295
BLAST of mRNA_P-fluviatile_contig18.3196.1 vs. uniprot
Match: D7FWN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWN3_ECTSI) HSP 1 Score: 276 bits (705), Expect = 9.740e-83 Identity = 157/253 (62.06%), Postives = 180/253 (71.15%), Query Frame = 3
Query: 210 PVTRAQVLGTIPAAIWGAMILGTV--EPATAAIPTAEDYAFGSGSKKRPAGASTPTRPESSADDCPDCSLLARRQRTAAXXXXXXXSPKSPEQLKRPEMKDDLSAPVPKSSVNPNNPAEVVRAVSGELDLMQALVNKERWGDALTRLRSYPLTTLKSPTLGMGSVGDVARALGVDKSKAADILEASMEAGLTLREVEDIVFSNTRTLEFFNSADFKQVEDLARNRKPTDLTEPLQLLADTKRLVEGVSELIGA 962
P++RAQ+L PA + A EPA AA+PT EDYAFG+GSK +KRPE++D+LSAP+PKSSVNP+NP EVVRAVSGELD MQ LV KERWGDALTRLRSYPLT LKSPTLGM SVGDV+RALGV SKA+DILEASMEAGLTLREVED+VFSNTRTLEFFNSAD+KQVEDLA++R PTDLTEPLQLL+DTK+LV GV++L+GA
Sbjct: 70 PLSRAQLLRAFPALVGVAAFHSATAAEPARAALPTTEDYAFGTGSK-----------------------------------------------VKRPEVQDELSAPLPKSSVNPDNPVEVVRAVSGELDRMQTLVKKERWGDALTRLRSYPLTALKSPTLGMKSVGDVSRALGVSNSKASDILEASMEAGLTLREVEDVVFSNTRTLEFFNSADYKQVEDLAKDRTPTDLTEPLQLLSDTKKLVGGVADLMGA 275 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig18.3196.1 >prot_P-fluviatile_contig18.3196.1 ID=prot_P-fluviatile_contig18.3196.1|Name=mRNA_P-fluviatile_contig18.3196.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=312bp MPRRRVRSGVGFSAVVVACFVTTGPASGFVASIPLRRIDATAYITASTTMback to top mRNA from alignment at P-fluviatile_contig18:892897..899070+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig18.3196.1 ID=mRNA_P-fluviatile_contig18.3196.1|Name=mRNA_P-fluviatile_contig18.3196.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6174bp|location=Sequence derived from alignment at P-fluviatile_contig18:892897..899070+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig18:892897..899070+ >mRNA_P-fluviatile_contig18.3196.1 ID=mRNA_P-fluviatile_contig18.3196.1|Name=mRNA_P-fluviatile_contig18.3196.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1872bp|location=Sequence derived from alignment at P-fluviatile_contig18:892897..899070+ (Porterinema fluviatile SAG_2381)back to top |