prot_P-fluviatile_contig18.3196.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig18.3196.1
Unique Nameprot_P-fluviatile_contig18.3196.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length312
Homology
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BLAST of mRNA_P-fluviatile_contig18.3196.1 vs. uniprot
Match: A0A6H5L290_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L290_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 2.520e-105
Identity = 188/311 (60.45%), Postives = 224/311 (72.03%), Query Frame = 0 
Query:    4 RRVRSGVGFSAVVVACFVTTGPASGFVASIPLRRIDATAYITASTTMSAES-------PVTRAQVLGTIPAAIWGAMILGTV--EPATAAIPTAEDYAFGSGSKKRPAGASTPTRPESSADDCPDCSLLARRQRTAAXXXXXXXSPKSPEQLKRPEMKDDLSAPVPKSSVNPNNPAEVVRAVSGELDLMQALVNKERWGDALTRLRSYPLTTLKSPTLGMGSVGDVARALGVDKSKAADILEASMEAGLTLREVEDIVFSNTRTLEFFNSADFKQVEDLARNRKPTDLTEPLQLLADTKRLVEGVSELIGA 305
            +R R GV   AVV A F              ++R+ A A  + +  M ++        P++RAQ+L  +P  +  A        EPA AA+PT EDYAFG+GSK   A  S  T+ + S D CPDCSL  RR+R A+          SP ++KRPE++DDLSAP+PKSSVNP+NP EVVRAVSGELD MQ LVNKERWGDALTRLRSYPLT LKSPTLGM SVGDVARALGV  SKA+DILEASMEAGLTLR+VED+VFSNTRTLEFFNSAD+KQVEDLA++R PTDLTEPLQLL+DTK+LV GV++L+GA
Sbjct:    3 KRTRLGVALFAVVNAHF-------------SVQRVGAFAVRSCARCMRSQPAMTVDSPPLSRAQMLRAVPVLVGVAAFHSATPAEPARAALPTTEDYAFGTGSKTS-ARTSASTQGQESKDACPDCSLSERRKRAASSSAVQS----SPSKVKRPEVQDDLSAPLPKSSVNPDNPVEVVRAVSGELDRMQTLVNKERWGDALTRLRSYPLTALKSPTLGMKSVGDVARALGVSNSKASDILEASMEAGLTLRQVEDVVFSNTRTLEFFNSADYKQVEDLAKDRTPTDLTEPLQLLSDTKKLVRGVADLMGA 295
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BLAST of mRNA_P-fluviatile_contig18.3196.1 vs. uniprot
Match: D7FWN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWN3_ECTSI)

HSP 1 Score: 276 bits (705), Expect = 6.000e-89
Identity = 157/253 (62.06%), Postives = 180/253 (71.15%), Query Frame = 0 
Query:   55 PVTRAQVLGTIPAAIWGAMILGTV--EPATAAIPTAEDYAFGSGSKKRPAGASTPTRPESSADDCPDCSLLARRQRTAAXXXXXXXSPKSPEQLKRPEMKDDLSAPVPKSSVNPNNPAEVVRAVSGELDLMQALVNKERWGDALTRLRSYPLTTLKSPTLGMGSVGDVARALGVDKSKAADILEASMEAGLTLREVEDIVFSNTRTLEFFNSADFKQVEDLARNRKPTDLTEPLQLLADTKRLVEGVSELIGA 305
            P++RAQ+L   PA +  A        EPA AA+PT EDYAFG+GSK                                               +KRPE++D+LSAP+PKSSVNP+NP EVVRAVSGELD MQ LV KERWGDALTRLRSYPLT LKSPTLGM SVGDV+RALGV  SKA+DILEASMEAGLTLREVED+VFSNTRTLEFFNSAD+KQVEDLA++R PTDLTEPLQLL+DTK+LV GV++L+GA
Sbjct:   70 PLSRAQLLRAFPALVGVAAFHSATAAEPARAALPTTEDYAFGTGSK-----------------------------------------------VKRPEVQDELSAPLPKSSVNPDNPVEVVRAVSGELDRMQTLVKKERWGDALTRLRSYPLTALKSPTLGMKSVGDVSRALGVSNSKASDILEASMEAGLTLREVEDVVFSNTRTLEFFNSADYKQVEDLAKDRTPTDLTEPLQLLSDTKKLVGGVADLMGA 275
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig18.3196.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L290_9PHAE2.520e-10560.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWN3_ECTSI6.000e-8962.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..311
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..19
score: 8.0
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig18contigP-fluviatile_contig18:892944..897488 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig18.3196.1mRNA_P-fluviatile_contig18.3196.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig18 892897..899070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig18.3196.1 ID=prot_P-fluviatile_contig18.3196.1|Name=mRNA_P-fluviatile_contig18.3196.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=312bp
MPRRRVRSGVGFSAVVVACFVTTGPASGFVASIPLRRIDATAYITASTTM
SAESPVTRAQVLGTIPAAIWGAMILGTVEPATAAIPTAEDYAFGSGSKKR
PAGASTPTRPESSADDCPDCSLLARRQRTAAAAPSSSSSPKSPEQLKRPE
MKDDLSAPVPKSSVNPNNPAEVVRAVSGELDLMQALVNKERWGDALTRLR
SYPLTTLKSPTLGMGSVGDVARALGVDKSKAADILEASMEAGLTLREVED
IVFSNTRTLEFFNSADFKQVEDLARNRKPTDLTEPLQLLADTKRLVEGVS
ELIGASDASAR*
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