mRNA_P-fluviatile_contig1.199.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig1.199.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE) HSP 1 Score: 303 bits (777), Expect = 4.360e-90 Identity = 184/320 (57.50%), Postives = 228/320 (71.25%), Query Frame = 3
Query: 45 HPSQQVQRNKDIKDMTITRTIKISFQGASHNVDLSAPFTLAGLQHAVASKFAVDLPPRAGLDEAAEGSDLSFTYKDSEGDDIVFDKDSELSLALRLCPSSLEISAARKKA-PSSKPNPERRLYQVAARNLREYNGVPSMTPAKLPKTLSFLKLGPRRLVKQGLAPRVLLARMNAEGNKNEGLTQQRQEQQQPLGDGENEEGLAEAVTAGMEMVSVKDDKQEPGDGFVSVESP------PVAVATASETADD------------KQVIHKAFIAAGIRLRPREVQPLLLALGVVPRRLVKLGYVDKKHLPRLLAAEKKMAN 947
H + + N D K MT T +IKI+FQGAS +V++ AP +LA LQ A+A+ F +LP R+ EAA+ +DLSFTYKD +GDDIVFDKDSEL LA+RLCPSSLEISA K++ P+ KP+PE RLY++AARNLREYNGVPSMT KL KTL+FLKL P+RLVKQGLAP+VLLARM AE N +++ PLGDG+N E LAE+V AGME++SV+DDK+E DGFVS ES P+ T++ D+ K +IHKAFI GI+LRPREV+PLL+AL V P RL KLG VD K L +L AEKK A+
Sbjct: 6 HNNNNNRYNND-KTMT-TPSIKINFQGASRDVNVPAPVSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKV------PLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETKKDLIHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLRAEKKAAH 317
BLAST of mRNA_P-fluviatile_contig1.199.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI) HSP 1 Score: 301 bits (772), Expect = 1.600e-89 Identity = 176/293 (60.07%), Postives = 219/293 (74.74%), Query Frame = 3
Query: 96 TRTIKISFQGASHNVDLSAPFTLAGLQHAVASKFAVDLPPRAGLDEAAEGSDLSFTYKDSEGDDIVFDKDSELSLALRLCPSSLEISAARKK-APSSKPNPERRLYQVAARNLREYNGVPSMTPAKLPKTLSFLKLGPRRLVKQGLAPRVLLARMNAEGNKNEGLTQQRQEQQQPLGDGENEEGLAEAVTAGMEMVSVKDDKQEPGDGFVSVESPPVAV-ATASETADD-------KQVIHKAFIAAGIRLRPREVQPLLLALGVVPRRLVKLGYVDKKHLPRLLAAEKKMAN 947
T +IKI+FQG S +V++ P TLA LQ A+A F +LP R+ EAA+ +DLSFTYKD +GDDIVFDKDSEL+LA+RLCP SLEISAA K+ P++KP+PE RLY++AARNLREYNGVPSMTP KL KTL+FL+L P+RLVKQGLAP+VLLARM AE N +++ PLGDG+N E LAE+V AGME++SV+DDK+E DGFVSVE + +E +D K +IHKAFIA GI+LRPREV+PLL+AL V P RL KLG V+ K L +L AEKK+A+
Sbjct: 3 TSSIKINFQGTSRDVNVPVPVTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKV------PLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSVEPADTSSPGNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAEKKVAH 289
BLAST of mRNA_P-fluviatile_contig1.199.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE) HSP 1 Score: 298 bits (764), Expect = 4.150e-89 Identity = 185/317 (58.36%), Postives = 227/317 (71.61%), Query Frame = 3
Query: 66 RNKDIKDMTITRTIKISFQGASHNVDLSAPFTLAGLQHAVASKFAVDLPPRAGLDEAAEGSDLSFTYKDSEGDDIVFDKDSELSLALRLCPSSLEISAARKKAPSSK-PNPERRLYQVAARNLREYNGVPSMTPAKLPKTLSFLKLGPRRLVKQGLAPRVLLARMNAEGNKNEGLTQQRQEQQQPLGDGENEEGLAEAVTAGMEMVSVKDDKQEPGDGFVSVESPPVAVATASETADDKQ-----------VIHKAFIAAGIRLRPREVQPLLLALGVVPRRLVKLGYVDKKHLPRLLAAEKKMANASGGANADGNR 980
R + K MT T +IKI+FQGAS +V + AP TLA LQ A+A+ F V+LP R+ EAA+ +DLSFTYKD +GDDIVFDKDSEL+LALRLCP SLEISAA K+ ++K P+ E LY++AARNLREYNGVPSMTP KL KTL+FLKL P+RLVKQGLAP++LLARM AE N L++ R LGDG+N E LAE V AGME +SV+DDK+E DGFVSVE A ++S+ ++++ +IHKAFIA GI+LRPREV+PLL+AL V P RL KLG VD K L +L AEKK A+ G G R
Sbjct: 21 RYNNDKTMT-TSSIKINFQGASRDVSVPAPATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVR------LGDGKNNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVEP---AETSSSDNGNEEENDDAAPEVKQNLIHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKKAAHKRHGPGHGGPR 327
BLAST of mRNA_P-fluviatile_contig1.199.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE) HSP 1 Score: 297 bits (760), Expect = 1.680e-88 Identity = 174/292 (59.59%), Postives = 217/292 (74.32%), Query Frame = 3
Query: 96 TRTIKISFQGASHNVDLSAPFTLAGLQHAVASKFAVDLPPRAGLDEAAEGSDLSFTYKDSEGDDIVFDKDSELSLALRLCPSSLEISAARKKAPSSK-PNPERRLYQVAARNLREYNGVPSMTPAKLPKTLSFLKLGPRRLVKQGLAPRVLLARMNAEGNKNEGLTQQRQEQQQPLGDGENEEGLAEAVTAGMEMVSVKDDKQEPGDGFVSVESPPVAV-ATASETADD------KQVIHKAFIAAGIRLRPREVQPLLLALGVVPRRLVKLGYVDKKHLPRLLAAEKKMAN 947
T +IKI+FQGAS +V++ P LA LQ A+A+ F V+LP R+ EAA +DLSFTYKD +GDDIVFDK+SEL LALRLCP SLEISAA K+ +++ P+ E +LY++AARNLREYNGVPSMTP KL KTL+FLKL P+RLVKQGLAP+VLLARM AE N +++ PLGDG+N E LAE+V AGME++SV+D K+E DGFVSVE ++ A +E +D K +IHKAFIA GI+LRPREV+PLL+AL V+P RL KLG V K L +L AEKK A+
Sbjct: 21 TSSIKITFQGASRDVNVRVPVMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKV------PLGDGKNNEDLAESVAAGMELMSVEDGKKEWNDGFVSVEPAEISFPANDNEEKNDAAPEAKKNLIHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRAMLRAEKKTAH 306
BLAST of mRNA_P-fluviatile_contig1.199.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI) HSP 1 Score: 296 bits (759), Expect = 1.960e-88 Identity = 180/316 (56.96%), Postives = 222/316 (70.25%), Query Frame = 3
Query: 69 NKDIKDMTITRT-IKISFQGASHNVDLSAPFTLAGLQHAVASKFAVDLPPRAGLDEAAEGSDLSFTYKDSEGDDIVFDKDSELSLALRLCPSSLEISAARK-KAPSSKPNPERRLYQVAARNLREYNGVPSMTPAKLPKTLSFLKLGPRRLVKQGLAPRVLLARMNAEGNKNEGLTQQRQEQQQPLGDGENEEGLAEAVTAGMEMVSVKDDKQEPGDGFVSVESPPVAVATASETADDKQ----------VIHKAFIAAGIRLRPREVQPLLLALGVVPRRLVKLGYVDKKHLPRLLAAEKKMANASGGANADGNR 980
N+D D T+T + IKI+FQGAS +V++ AP TLA LQ +A+ F +LP R+ EAA+ +DLSFTYKD +GDDIVFDKDSEL LA+RLCP SLEISAA K K + P+ E RLY++AARNLREYNGVPSMTP KL KTL+FLKL P+RLVKQGLAP+ LL RM AE N +++ PLGDG+N E LAE+V AGME++S++DDK+E DGFVSVE P ++ ++K +IHKAFIA GI+LRPREV+PLL+AL V P RL KLG VD K L +L AEKK A+ G G R
Sbjct: 9 NRDNNDNTMTTSSIKINFQGASRDVNVPAPVTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKV------PLGDGKNNEDLAESVAAGMELMSLEDDKKEWNDGFVSVE--PADTSSPDNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKTAHKRHGPGHGGPR 316
BLAST of mRNA_P-fluviatile_contig1.199.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE) HSP 1 Score: 293 bits (750), Expect = 7.290e-86 Identity = 176/303 (58.09%), Postives = 217/303 (71.62%), Query Frame = 3
Query: 96 TRTIKISFQGASHNVDLSAPFTLAGLQHAVASKFAVDLPPRAGLDEAAEGSDLSFTYKDSEGDDIVFDKDSELSLALRLCPSSLEISAARKK-APSSKPNPERRLYQVAARNLREYNGVPSMTPAKLPKTLSFLKLGPRRLVKQGLAPRVLLARMNAEGNKNEGLTQQRQEQQQPLGDGENEEGLAEAVTAGMEMVSVKDDKQEPGDGFVSVE------SPPVAVATAS------ETADD------KQVIHKAFIAAGIRLRPREVQPLLLALGVVPRRLVKLGYVDKKHLPRLLAAEKKMAN 947
T +IKI+FQG S NV++ APFTLA LQ +A+ F +LP R+ EA + +DLSFTYKD +GDDIVFDKDSEL+LA+RLCP SLEISAA K+ P +KP+PE RLY++AARNLREYNGVPSMT KL KTL+FLKL PRRLVKQGLAP+ LLARM AE N +++ LGDGEN E LAE+V AGME++SV+DDK+E +GFVS + + P+ T+S E DD K +IH AFIA GI+LRPREV+PLL+AL V P RL KLG V+ K+L +L AE K A+
Sbjct: 3 TSSIKINFQGTSRNVNVQAPFTLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKV------TLGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRAMLQAETKAAH 299
BLAST of mRNA_P-fluviatile_contig1.199.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI) HSP 1 Score: 265 bits (678), Expect = 2.710e-78 Identity = 163/278 (58.63%), Postives = 202/278 (72.66%), Query Frame = 3
Query: 87 MTITRTIKISFQGASHNVDLSAPFTLAGLQHAVASKFAVDLPPRAGLDEAAEGSDLSFTYKDSEGDDIVFDKDSELSLALRLCPSSLEISAARKKA-PSSKPNPERRLYQVAARNLREYNGVPSMTPAKLPKTLSFLKLGPRRLVKQGLAPRVLLARMNAEGNKNEGLTQQRQEQQQPLGDGENEEGLAEAVTAGMEMVSVKDDKQEPGDGFVSVES--PPVAVATASETA----------DD------KQVIHKAFIAAGIRLRPREVQPLLLALGV 863
M T +IKI+FQGAS +V++ AP TL LQ A+A+ F +LP R+ EAA+ +DLSFTYKD +GDDIVFDKDSEL LA+RLCPSSLEISAA K++ P++KP+PE RLY++AARNLREYNGVPSMTP KL KTL+FLKL P+RLVKQGLAP+VLLARM AE N +++ PLGDG+N E LA++V AGME++SV+D K+E DGFVS ES P A +ET+ DD K +IHKAFIA GI+LRPRE LLL + +
Sbjct: 15 MMTTSSIKINFQGASRDVNVPAPVTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKV------PLGDGKNNEDLADSVAAGMELMSVED-KKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDAAPEVKKNLIHKAFIAGGIQLRPRE--GLLLGVSI 283
BLAST of mRNA_P-fluviatile_contig1.199.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 4.690e-10 Identity = 60/173 (34.68%), Postives = 90/173 (52.02%), Query Frame = 3
Query: 378 SSKPNPERRLYQVAARNLREYNGVPSMTPAKLPKTLSFLKLGPRRLVKQGLAPRVLLARMNAEGNKNEGLTQQRQEQQQPLGDGENEEGLAEAVTAGMEMVSVKDDKQEPGDGFVSVESPPVAVATASETADDKQVIHKAFIAAGIRLRPREVQPLLLALGVVPRRLVKLGYV 896
+ +PNP +++ AARNLREY+GVPS+TP L T+ L+L P RLV QGLAP++LL +GN G+ + G E EE A + ++ S D + G+ + ++ + E K I F+A G++LRPRE +PLL + ++ V L V
Sbjct: 34 TGEPNPL--MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILL-----KGNSTAGVDA---DSTDGSGGFEAEEEQANNQFS-HDLSSNSSDGGDTGNDNIVTQN-----SIGFEARASKHPIQAVFVAVGVQLRPRETRPLLRGVVLLTSSTVALEVV 190
BLAST of mRNA_P-fluviatile_contig1.199.1 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 1.080e-6 Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = 3
Query: 405 LYQVAARNLREYNGVPSMTPAKLPKTLSFLKLGPRRLVKQGLAPRVL 545
LY+ AARNLREY+GVPSMT L KT+ L+L P RLV QGLAP+ +
Sbjct: 53 LYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI 99
BLAST of mRNA_P-fluviatile_contig1.199.1 vs. uniprot
Match: D8LC36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC36_ECTSI) HSP 1 Score: 58.5 bits (140), Expect = 3.600e-6 Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 3
Query: 405 LYQVAARNLREYNGVPSMTPAKLPKTLSFLKLGPRRLVKQGLAPRVLL 548
+YQ AARNLRE+ VPS+T L KT++ L+L P RLV QGLAPR LL
Sbjct: 46 VYQAAARNLREFRRVPSLTAGGLEKTMALLQLRPARLVAQGLAPRDLL 93 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig1.199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig1.199.1 >prot_P-fluviatile_contig1.199.1 ID=prot_P-fluviatile_contig1.199.1|Name=mRNA_P-fluviatile_contig1.199.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=453bp MTITRTIKISFQGASHNVDLSAPFTLAGLQHAVASKFAVDLPPRAGLDEAback to top mRNA from alignment at P-fluviatile_contig1:2553952..2557170+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig1.199.1 ID=mRNA_P-fluviatile_contig1.199.1|Name=mRNA_P-fluviatile_contig1.199.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3219bp|location=Sequence derived from alignment at P-fluviatile_contig1:2553952..2557170+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig1:2553952..2557170+ >mRNA_P-fluviatile_contig1.199.1 ID=mRNA_P-fluviatile_contig1.199.1|Name=mRNA_P-fluviatile_contig1.199.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2718bp|location=Sequence derived from alignment at P-fluviatile_contig1:2553952..2557170+ (Porterinema fluviatile SAG_2381)back to top |