mRNA_P-fluviatile_contig16.2664.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig16.2664.1 vs. uniprot
Match: A0A6H5J8Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y8_9PHAE) HSP 1 Score: 164 bits (414), Expect = 3.610e-44 Identity = 81/108 (75.00%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 43 QETAADANDDDHRGFIDLLPRARDGRIRQVDWDLLLKRQPNSLTAAEKAEFEDVTRLFF-KREVNEYNGNKFRELGEPVARVSAVHSGSNTTKVTADTAEGLERDLYL 363
++TAA ANDDD RGFI+LLPRARDG++ DWDLLLKRQPN LTAAEKA FED TRLF+ K+EVN+YNG K REL PVARVSAVH+G+N + TADTAEGLERDLYL
Sbjct: 224 RQTAAAANDDDQRGFIELLPRARDGQLCDEDWDLLLKRQPNRLTAAEKAAFEDATRLFYSKKEVNKYNGKKLRELDNPVARVSAVHTGANARRATADTAEGLERDLYL 331
BLAST of mRNA_P-fluviatile_contig16.2664.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE) HSP 1 Score: 164 bits (414), Expect = 2.950e-43 Identity = 81/108 (75.00%), Postives = 92/108 (85.19%), Query Frame = 1
Query: 43 QETAADANDDDHRGFIDLLPRARDGRIRQVDWDLLLKRQPNSLTAAEKAEFEDVTRLFF-KREVNEYNGNKFRELGEPVARVSAVHSGSNTTKVTADTAEGLERDLYL 363
++TAA ANDDD RGFI+LLPRARDG++ DWDLLLKRQPN LTAAEKA FED TRLF+ K+EVN+YNG K REL PVARVSAVH+G+N + TADTAEGLERDLYL
Sbjct: 1301 RQTAAAANDDDQRGFIELLPRARDGQLCDEDWDLLLKRQPNRLTAAEKAAFEDATRLFYSKKEVNKYNGKKLRELDNPVARVSAVHTGANARRATADTAEGLERDLYL 1408
BLAST of mRNA_P-fluviatile_contig16.2664.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 2.380e-14 Identity = 38/52 (73.08%), Postives = 44/52 (84.62%), Query Frame = 1
Query: 211 LFF-KREVNEYNGNKFRELGEPVARVSAVHSGSNTTKVTADTAEGLERDLYL 363
LF+ K+EVN+YNG K REL PVARVSAVH+G+N + TADTAEGLERDLYL
Sbjct: 52 LFYSKKEVNKYNGKKLRELDNPVARVSAVHTGANARRATADTAEGLERDLYL 103
BLAST of mRNA_P-fluviatile_contig16.2664.1 vs. uniprot
Match: UPI00109BC70A (uncharacterized protein LOC110236158 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BC70A) HSP 1 Score: 78.6 bits (192), Expect = 1.600e-13 Identity = 44/101 (43.56%), Postives = 61/101 (60.40%), Query Frame = 1
Query: 64 NDDDHRGFIDLLPRARDGRIRQVDWDLLLKRQPNSLTAAEKAEFEDVTRLFFKRE-VNEYNGNKFRELGEPVARVSAVHSGSNTTKVTADTAEGLERDLYL 363
+D + R F DLL R+G I DW++LL RQP S+T + EF+DVTRLF+ E V +YN +K EL P+A++ A HS K++ GLE L+L
Sbjct: 1468 SDSEQRIFRDLLKHIRNGCISTSDWNVLLTRQPTSITNLD--EFKDVTRLFYSNEEVGKYNFSKLEELKHPIAKIEARHSTIKAKKISPQELFGLEPLLFL 1566
BLAST of mRNA_P-fluviatile_contig16.2664.1 vs. uniprot
Match: A0A6S7JFP0_PARCT (Uncharacterized protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JFP0_PARCT) HSP 1 Score: 74.7 bits (182), Expect = 1.400e-12 Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 1
Query: 85 FIDLLPRARDGRIRQVDWDLLLKRQPNSLTAAEKAEFEDVTRLFF-KREVNEYNGNKFRELGEPVARVSAVHSGSNTTKVTADTAEGLERDLYLGSQ 372
F LL R R+G + Q DW L+L+ +S T+ +F D RL+F K+ V EYN K +LG+PVA++ A HSG T+D A GL+ L+L ++
Sbjct: 57 FRALLMRMRNGEVTQEDWKLMLE---HSTTSVPMDQFTDAIRLYFDKKSVAEYNYGKLLQLGQPVAKIQAKHSGHGACAATSDEAGGLDAVLFLSTK 150
BLAST of mRNA_P-fluviatile_contig16.2664.1 vs. uniprot
Match: A0A6S7HMN7_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HMN7_PARCT) HSP 1 Score: 75.5 bits (184), Expect = 1.720e-12 Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 1
Query: 70 DDHR--GFIDLLPRARDGRIRQVDWDLLLKRQPNSLTAAEKAEFEDVTRLFF-KREVNEYNGNKFRELGEPVARVSAVHSGSNTTKVTADTAEGLERDLYLGSQ 372
DDH F LL R R+G + DW LLL+ +S T+ +F D RL+F K+ V EYN K +LG+PVA++ A HSG + T+D A GL+ L+L ++
Sbjct: 611 DDHETVAFRALLMRMRNGEVTGEDWKLLLE---HSTTSVPMDQFTDAIRLYFDKKSVAEYNYEKLLQLGQPVAKIQAKHSGHGASAATSDEAGGLDAVLFLSTK 711
BLAST of mRNA_P-fluviatile_contig16.2664.1 vs. uniprot
Match: A0A6S7GPZ2_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7GPZ2_PARCT) HSP 1 Score: 74.7 bits (182), Expect = 3.400e-12 Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 1
Query: 85 FIDLLPRARDGRIRQVDWDLLLKRQPNSLTAAEKAEFEDVTRLFF-KREVNEYNGNKFRELGEPVARVSAVHSGSNTTKVTADTAEGLERDLYLGSQ 372
F LL R R+G + Q DW L+L+ +S T+ +F D RL+F K+ V EYN K +LG+PVA++ A HSG T+D A GL+ L+L ++
Sbjct: 1244 FRALLMRMRNGEVTQEDWKLMLE---HSTTSVPMDQFTDAIRLYFDKKSVAEYNYGKLLQLGQPVAKIQAKHSGHGACAATSDEAGGLDAVLFLSTK 1337
BLAST of mRNA_P-fluviatile_contig16.2664.1 vs. uniprot
Match: A0A6S7FUF4_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FUF4_PARCT) HSP 1 Score: 73.6 bits (179), Expect = 7.970e-12 Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 1
Query: 85 FIDLLPRARDGRIRQVDWDLLLKRQPNSLTAAEKAEFEDVTRLFF-KREVNEYNGNKFRELGEPVARVSAVHSGSNTTKVTADTAEGLERDLYLGSQ 372
F LL R R+G + DW LLL+ +S T+ +F D RL+F K+ V EYN K +LG+PVA++ A HSG + T+D A GL+ L+L ++
Sbjct: 519 FRALLMRMRNGEVTGEDWKLLLE---HSTTSVPMDQFTDAIRLYFDKKSVAEYNYEKLLQLGQPVAKIQAKHSGHGASAATSDEAGGLDAVLFLSTK 612
BLAST of mRNA_P-fluviatile_contig16.2664.1 vs. uniprot
Match: A0A7D9ENH0_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9ENH0_PARCT) HSP 1 Score: 73.6 bits (179), Expect = 8.150e-12 Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 1
Query: 85 FIDLLPRARDGRIRQVDWDLLLKRQPNSLTAAEKAEFEDVTRLFF-KREVNEYNGNKFRELGEPVARVSAVHSGSNTTKVTADTAEGLERDLYLGSQ 372
F LL R R+G + DW LLL+ +S T+ +F D RL+F K+ V EYN K +LG+PVA++ A HSG + T+D A GL+ L+L ++
Sbjct: 850 FRALLMRMRNGEVTGEDWKLLLE---HSTTSVPMDQFTDAIRLYFDKKSVAEYNYEKLLQLGQPVAKIQAKHSGHGASAATSDEAGGLDAVLFLSTK 943
BLAST of mRNA_P-fluviatile_contig16.2664.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 9.080e-12 Identity = 36/40 (90.00%), Postives = 37/40 (92.50%), Query Frame = 2
Query: 365 GAKVTLTKNLYQQVGLVNGIRGEVVELVNAVDAPPPKLPL 484
GAKV L+KNLYQQVGLVNGIRGEVVELV A DAPPPKLPL
Sbjct: 280 GAKVMLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPL 319 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig16.2664.1 >prot_P-fluviatile_contig16.2664.1 ID=prot_P-fluviatile_contig16.2664.1|Name=mRNA_P-fluviatile_contig16.2664.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=153bp TSQAGSPKRTGCGPQETAADANDDDHRGFIDLLPRARDGRIRQVDWDLLLback to top mRNA from alignment at P-fluviatile_contig16:597060..597636+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig16.2664.1 ID=mRNA_P-fluviatile_contig16.2664.1|Name=mRNA_P-fluviatile_contig16.2664.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=577bp|location=Sequence derived from alignment at P-fluviatile_contig16:597060..597636+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig16:597060..597636+ >mRNA_P-fluviatile_contig16.2664.1 ID=mRNA_P-fluviatile_contig16.2664.1|Name=mRNA_P-fluviatile_contig16.2664.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=918bp|location=Sequence derived from alignment at P-fluviatile_contig16:597060..597636+ (Porterinema fluviatile SAG_2381)back to top |