prot_P-fluviatile_contig16.2644.1 (polypeptide) Porterinema fluviatile SAG_2381

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-fluviatile_contig16.2644.1
Unique Nameprot_P-fluviatile_contig16.2644.1
Typepolypeptide
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Sequence length127
Homology
BLAST of mRNA_P-fluviatile_contig16.2644.1 vs. uniprot
Match: A0A6H5L203_9PHAE (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L203_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 3.680e-66
Identity = 97/110 (88.18%), Postives = 103/110 (93.64%), Query Frame = 0
Query:    1 MEGTATRFEMELELMNCLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYARFITYPHSLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQFGKRVFPSPPPSS 110
            MEG+ TRFEMELELMNCLASPEYLHYLAQSGYLDDRAF+RFLEYLQYFKRP+YA+FITYPHSLAMLDLLINNP FRKEIAHVSFRDFVHQQQFLHWQFGK   P  PP++
Sbjct:    1 MEGSGTRFEMELELMNCLASPEYLHYLAQSGYLDDRAFVRFLEYLQYFKRPEYAKFITYPHSLAMLDLLINNPPFRKEIAHVSFRDFVHQQQFLHWQFGKTAAPPRPPAA 110          
BLAST of mRNA_P-fluviatile_contig16.2644.1 vs. uniprot
Match: D7FV80_ECTSI (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV80_ECTSI)

HSP 1 Score: 148 bits (373), Expect = 9.090e-44
Identity = 70/77 (90.91%), Postives = 74/77 (96.10%), Query Frame = 0
Query:    1 MEGTATRFEMELELMNCLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYARFITYPHSLAMLDLLINNPAFRK 77
            MEG+ TRFEMELELMNCLASPEYLHYLAQ GYLDDRAF+RFLEYLQYFKRP+YA+FITYPHSLAMLDLLINNP FRK
Sbjct:    1 MEGSGTRFEMELELMNCLASPEYLHYLAQGGYLDDRAFIRFLEYLQYFKRPEYAKFITYPHSLAMLDLLINNPPFRK 77          
BLAST of mRNA_P-fluviatile_contig16.2644.1 vs. uniprot
Match: A0A835Z5G5_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G5_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.010e-38
Identity = 62/97 (63.92%), Postives = 76/97 (78.35%), Query Frame = 0
Query:    5 ATRFEMELELMNCLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYARFITYPHSLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQFGKR 101
            A RFE+ELE + CLASPEYLH+LAQ  Y DD AF+ FL+YL Y++RPQYA+++ YPH LAMLD L+N+  FR E+   SFRDFVHQQQF HWQ  +R
Sbjct:   23 AQRFEVELEFVQCLASPEYLHFLAQQRYFDDPAFMAFLQYLTYWRRPQYAKYLMYPHCLAMLDALLNSKRFRSELLMESFRDFVHQQQFFHWQHKRR 119          
BLAST of mRNA_P-fluviatile_contig16.2644.1 vs. uniprot
Match: A0A6U6IBL1_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6IBL1_9STRA)

HSP 1 Score: 132 bits (333), Expect = 4.000e-37
Identity = 62/95 (65.26%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    7 RFEMELELMNCLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYARFITYPHSLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQFGKR 101
            RFE+ELE + CLASP YLH+LA SG L D +FL FLEYL+Y+ RP+YARFITYPH L  LDLL  N  FR+E+A+V+FR+FVH+QQF  WQF  R
Sbjct:   33 RFELELEFVQCLASPAYLHHLATSGLLSDSSFLSFLEYLRYWSRPEYARFITYPHCLYFLDLLTTNETFRREMANVAFRNFVHEQQFYSWQFRSR 127          
BLAST of mRNA_P-fluviatile_contig16.2644.1 vs. uniprot
Match: A0A7S3XZ41_HETAK (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZ41_HETAK)

HSP 1 Score: 129 bits (325), Expect = 8.480e-36
Identity = 58/97 (59.79%), Postives = 78/97 (80.41%), Query Frame = 0
Query:    1 MEGTATRFEMELELMNCLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYARFITYPHSLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQ 97
            ++G  +RFE+ELE + CL+SPEYLHYLAQ+ Y +D AF+ FL YLQY++RP+YA+FI YPH LA +++L  + AFRKE+A   F++FVHQQQF HWQ
Sbjct:   40 LDGGHSRFEVELEFVQCLSSPEYLHYLAQNKYFEDPAFINFLHYLQYWRRPEYAKFIIYPHCLAFMEML-EDEAFRKELAKPGFKEFVHQQQFFHWQ 135          
BLAST of mRNA_P-fluviatile_contig16.2644.1 vs. uniprot
Match: A0A7S2XM67_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XM67_9STRA)

HSP 1 Score: 120 bits (300), Expect = 3.560e-32
Identity = 54/92 (58.70%), Postives = 72/92 (78.26%), Query Frame = 0
Query:    7 RFEMELELMNCLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYARFITYPHSLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQF 98
            RFE+ELE +  LASP Y+H+LA SG L   +F+ FL YLQY+KRP+YA++I+YPH    LDLLI+N  FR+E+A+V FR+FVH+QQF  WQ+
Sbjct:   28 RFELELEFLQSLASPAYVHHLATSGILQSPSFIAFLRYLQYWKRPEYAKYISYPHCFFFLDLLIHNEPFRREMANVGFRNFVHEQQFYSWQY 119          
BLAST of mRNA_P-fluviatile_contig16.2644.1 vs. uniprot
Match: A0A7S2EVA4_TRICV (Mediator of RNA polymerase II transcription subunit 31 (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVA4_TRICV)

HSP 1 Score: 119 bits (298), Expect = 6.960e-32
Identity = 54/91 (59.34%), Postives = 70/91 (76.92%), Query Frame = 0
Query:    7 RFEMELELMNCLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYARFITYPHSLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQ 97
            RFE+ELE + CLASP Y+H+LA SG L D +FL FL YL+Y+  P+YARF+ YPH L  LDLL  +  FR+E+A+V+FR+FVH+QQF  WQ
Sbjct:   39 RFELELEFVQCLASPAYMHHLATSGLLSDPSFLSFLRYLRYWSHPEYARFLVYPHCLYFLDLLCESEGFRREMANVAFRNFVHEQQFYGWQ 129          
BLAST of mRNA_P-fluviatile_contig16.2644.1 vs. uniprot
Match: A0A7S3QJ33_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJ33_9STRA)

HSP 1 Score: 121 bits (303), Expect = 8.130e-32
Identity = 57/97 (58.76%), Postives = 73/97 (75.26%), Query Frame = 0
Query:    7 RFEMELELMNCLASPEYLHYLAQSGYLDDRAFLRFLEYLQ-YFKRPQYARFITYPHSLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQFGKRV 102
            RFE+ELE +  LASP YLH+LA  GY  D AFL +L YL+ Y+ RP+YA++ITYPH L  LDL I   AFRKEI+ V FR+FVH+QQF++WQ+  R+
Sbjct:   77 RFELELEFVQSLASPAYLHHLATQGYFQDEAFLTYLRYLRSYWTRPEYAKYITYPHCLFFLDLAIEKEAFRKEISQVGFRNFVHEQQFMNWQYRSRM 173          
BLAST of mRNA_P-fluviatile_contig16.2644.1 vs. uniprot
Match: A0A2P6TGR1_CHLSO (Mediator of RNA polymerase II transcription subunit 31 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TGR1_CHLSO)

HSP 1 Score: 112 bits (281), Expect = 2.260e-29
Identity = 51/94 (54.26%), Postives = 73/94 (77.66%), Query Frame = 0
Query:    7 RFEMELELMNCLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYARFITYPHSLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQFGK 100
            RFE+ELE ++CLA+P YL++LAQ+ Y +D AFL +L+YL Y+++PQYARFI YPH+L  LDLL   P FR +IA+ ++++ VH QQF  WQ+ +
Sbjct:   22 RFELELEFLHCLANPGYLNWLAQNRYFEDEAFLEYLKYLLYWRQPQYARFIVYPHALYFLDLL-QTPEFRAKIANPAYKEMVHTQQFFFWQYAR 114          
BLAST of mRNA_P-fluviatile_contig16.2644.1 vs. uniprot
Match: A0A6V2LYR4_9STRA (Mediator of RNA polymerase II transcription subunit 31 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2LYR4_9STRA)

HSP 1 Score: 113 bits (282), Expect = 5.420e-29
Identity = 51/92 (55.43%), Postives = 66/92 (71.74%), Query Frame = 0
Query:    7 RFEMELELMNCLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKRPQYARFITYPHSLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQF 98
            RFE+ELE + CLASP YLH+LA+S  L   +FL +     Y+KRP+Y RFI YPH L  LDL++ N  FR+E+ +V FR+FVH+QQF  WQF
Sbjct:   50 RFELELEFIQCLASPAYLHHLAESNVLSSPSFLSYXXXXXYWKRPEYVRFIIYPHCLYFLDLILENETFRREMGNVGFRNFVHEQQFYSWQF 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig16.2644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L203_9PHAE3.680e-6688.18Mediator of RNA polymerase II transcription subuni... [more]
D7FV80_ECTSI9.090e-4490.91Mediator of RNA polymerase II transcription subuni... [more]
A0A835Z5G5_9STRA1.010e-3863.92Mediator of RNA polymerase II transcription subuni... [more]
A0A6U6IBL1_9STRA4.000e-3765.26Mediator of RNA polymerase II transcription subuni... [more]
A0A7S3XZ41_HETAK8.480e-3659.79Mediator of RNA polymerase II transcription subuni... [more]
A0A7S2XM67_9STRA3.560e-3258.70Mediator of RNA polymerase II transcription subuni... [more]
A0A7S2EVA4_TRICV6.960e-3259.34Mediator of RNA polymerase II transcription subuni... [more]
A0A7S3QJ33_9STRA8.130e-3258.76Mediator of RNA polymerase II transcription subuni... [more]
A0A2P6TGR1_CHLSO2.260e-2954.26Mediator of RNA polymerase II transcription subuni... [more]
A0A6V2LYR4_9STRA5.420e-2955.43Mediator of RNA polymerase II transcription subuni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038089Mediator complex, subunit Med31 domain superfamilyGENE3D1.10.10.1340coord: 1..92
e-value: 1.2E-27
score: 97.2
IPR008831Mediator complex, subunit Med31PFAMPF05669Med31coord: 6..97
e-value: 2.2E-32
score: 110.9
IPR008831Mediator complex, subunit Med31PANTHERPTHR13186MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT SOH1coord: 4..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig16contigP-fluviatile_contig16:317251..319123 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig16.2644.1mRNA_P-fluviatile_contig16.2644.1Porterinema fluviatile SAG_2381mRNAP-fluviatile_contig16 316312..319370 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-fluviatile_contig16.2644.1 ID=prot_P-fluviatile_contig16.2644.1|Name=mRNA_P-fluviatile_contig16.2644.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=127bp
MEGTATRFEMELELMNCLASPEYLHYLAQSGYLDDRAFLRFLEYLQYFKR
PQYARFITYPHSLAMLDLLINNPAFRKEIAHVSFRDFVHQQQFLHWQFGK
RVFPSPPPSSQPLSDYTPPDQNQDQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038089Med31_sf
IPR008831Mediator_Med31